RNA–Protein interactions for RNA: ENST00000528482.6

AP004608.1-203, humanhuman

TSL 5 BASIC

Gene AP004608.1, Length 3,679 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-203ENST00000528482 AEBP2Q6ZN18 517 aaPredicted RBP16.3■□□□□ 0.2
AP004608.1-203ENST00000528482 CDK5RAP3Q96JB5 506 aa16.3■□□□□ 0.2
AP004608.1-203ENST00000528482 KDM4CQ9H3R0 1056 aa16.3■□□□□ 0.2
AP004608.1-203ENST00000528482 SLIT2O94813 1529 aa16.3■□□□□ 0.2
AP004608.1-203ENST00000528482 DNAJC8O75937 253 aaPredicted RBP16.3■□□□□ 0.2
AP004608.1-203ENST00000528482 ATP6V1G2O95670 118 aa16.3■□□□□ 0.2
AP004608.1-203ENST00000528482 GOLGA8HP0CJ92 632 aa16.3■□□□□ 0.2
AP004608.1-203ENST00000528482 USP11P51784 963 aa16.3■□□□□ 0.2
AP004608.1-203ENST00000528482 NAPAP54920 295 aa16.3■□□□□ 0.2
AP004608.1-203ENST00000528482 DHX9Q08211 1270 aaKnown RBP16.3■□□□□ 0.2
AP004608.1-203ENST00000528482 CHADLQ6NUI6 762 aa16.3■□□□□ 0.2
AP004608.1-203ENST00000528482 PSMD1Q99460 953 aa16.3■□□□□ 0.2
AP004608.1-203ENST00000528482 CRNKL1Q9BZJ0 848 aaKnown RBP16.3■□□□□ 0.2
AP004608.1-203ENST00000528482 NOD2Q9HC29 1040 aa16.3■□□□□ 0.2
AP004608.1-203ENST00000528482 NOC2LQ9Y3T9 749 aaKnown RBP16.3■□□□□ 0.2
AP004608.1-203ENST00000528482 KRIT1O00522 736 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 ITGA4P13612 1032 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 GRM4Q14833 912 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 TMC3Q7Z5M5 1100 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 P3H4Q92791 437 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 CHMP6Q96FZ7 201 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 ZNF142P52746 1687 aaPredicted RBP16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 PGRMC1O00264 195 aaKnown RBP16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 CTNND1O60716 968 aaKnown RBP16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 TRIM37O94972 964 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 NEK8Q86SG6 692 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 ACTRT1Q8TDG2 376 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 PBKQ96KB5 322 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 SLC24A3Q9HC58 644 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 CASZ1Q86V15 1759 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 GNAQP50148 359 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 ASIC2Q16515 512 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 ARHGAP27Q6ZUM4 889 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 KRT25Q7Z3Z0 450 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 PNMA5Q96PV4 448 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 DPH5Q9H2P9 285 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 MYH7BA7E2Y1 1941 aa16.29■□□□□ 0.2
AP004608.1-203ENST00000528482 CES2O00748 559 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 PPIP5K2O43314 1243 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 GHRP10912 638 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 FKBP3Q00688 224 aaKnown RBP16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 NBPF9Q3BBW0 867 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 DHX37Q8IY37 1157 aaKnown RBP16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 METTL13Q8N6R0 699 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 CCDC197Q8NCU1 140 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 DDX12PQ92771 950 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 XPO6Q96QU8 1125 aaKnown RBP16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 MCM9Q9NXL9 1143 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 SWAP70Q9UH65 585 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 COL22A1Q8NFW1 1626 aaPredicted RBP16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 TOGARAM1Q9Y4F4 1720 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 USP17L3A6NCW0 530 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 USP17L4A6NCW7 530 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 CCT8L1PA6NM43 557 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 TTI1O43156 1089 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 USP17L1Q7RTZ2 530 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 TCP11Q8WWU5 503 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 CELF4Q9BZC1 486 aaKnown RBP16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 TRIM31Q9BZY9 425 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 RIC8AQ9NPQ8 531 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 PNMA2Q9UL42 364 aa16.28■□□□□ 0.2
AP004608.1-203ENST00000528482 F8VZ95 297 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 USP17L8P0C7I0 530 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 MECOMQ03112 1051 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 DGKHQ86XP1 1220 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 MYOCDQ8IZQ8 938 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 TBCKQ8TEA7 893 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 CUL5Q93034 780 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 NSUN4Q96CB9 384 aaKnown RBP16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 CARD10Q9BWT7 1032 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 TRIM6Q9C030 488 aaPredicted RBP16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 MYH4Q9Y623 1939 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 SMCO2A6NFE2 343 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 BUB1BO60566 1050 aaPredicted RBP16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 CAVIN4Q5BKX8 364 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 ERMARDQ5T6L9 678 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 TAX1BP1Q86VP1 789 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 CALR3Q96L12 384 aaKnown RBP16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 ARPP21Q9UBL0 812 aaPredicted RBP16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 STK17AQ9UEE5 414 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 ATP8A1Q9Y2Q0 1164 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 A0A1B0GUL6 1792 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 RREB1Q92766 1687 aa16.27■□□□□ 0.2
AP004608.1-203ENST00000528482 CLTAP09496 248 aa16.27■□□□□ 0.19
AP004608.1-203ENST00000528482 PTK2Q05397 1052 aa16.27■□□□□ 0.19
AP004608.1-203ENST00000528482 PNMA8AQ86V59 439 aaPredicted RBP16.27■□□□□ 0.19
AP004608.1-203ENST00000528482 STAMBPL1Q96FJ0 436 aa16.27■□□□□ 0.19
AP004608.1-203ENST00000528482 ZMYND12Q9H0C1 365 aa16.27■□□□□ 0.19
AP004608.1-203ENST00000528482 ATP8A2Q9NTI2 1148 aa16.27■□□□□ 0.19
AP004608.1-203ENST00000528482 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.27■□□□□ 0.19
AP004608.1-203ENST00000528482 PROM2Q8N271 834 aa16.26■□□□□ 0.19
AP004608.1-203ENST00000528482 DYNLL2Q96FJ2 89 aa16.26■□□□□ 0.19
AP004608.1-203ENST00000528482 FAM129AQ9BZQ8 928 aa16.26■□□□□ 0.19
AP004608.1-203ENST00000528482 AIPL1Q9NZN9 384 aa16.26■□□□□ 0.19
AP004608.1-203ENST00000528482 TBC1D7Q9P0N9 293 aa16.26■□□□□ 0.19
AP004608.1-203ENST00000528482 A0A0G2JS52 829 aa16.26■□□□□ 0.19
AP004608.1-203ENST00000528482 POTEMA6NI47 508 aa16.26■□□□□ 0.19
AP004608.1-203ENST00000528482 CAND2O75155 1236 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms