RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 CCDC186Q7Z3E2 898 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 KRT26Q7Z3Y9 468 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 PACS2Q86VP3 889 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 ENAHQ8N8S7 591 aaPredicted RBP4.14□□□□□ -1.75
PTPN22-207ENST00000528414 GALNT6Q8NCL4 622 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 BAP1Q92560 729 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 GIMAP5Q96F15 307 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 BICC1Q9H694 974 aaKnown RBP4.14□□□□□ -1.75
PTPN22-207ENST00000528414 ELAC1Q9H777 363 aaKnown RBP4.14□□□□□ -1.75
PTPN22-207ENST00000528414 STIM2Q9P246 746 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 CTNNA3Q9UI47 895 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 CROTQ9UKG9 612 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 TRIM17Q9Y577 477 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 EMILIN1Q9Y6C2 1016 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 hCG_1642624A0A1W2PR95 340 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 KRT13P13646 458 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 TRIM27P14373 513 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 SLC16A2P36021 539 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 NKX3-2P78367 333 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 SGCGQ13326 291 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 SEMA3AQ14563 771 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 TLDC1Q6P9B6 456 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 ATG9AQ7Z3C6 839 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 HOOK3Q86VS8 718 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 ZNF280CQ8ND82 737 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 TEKT4Q8WW24 435 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 BTBD6Q96KE9 485 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 TRERF1Q96PN7 1200 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 SRPK1Q96SB4 655 aaKnown RBP4.14□□□□□ -1.75
PTPN22-207ENST00000528414 ZPBPQ9BS86 351 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 HERC2P3Q9BVR0 1158 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 CDH19Q9H159 772 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 VCX3BQ9H321 246 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 UPF2Q9HAU5 1272 aaKnown RBP4.14□□□□□ -1.75
PTPN22-207ENST00000528414 SRA1Q9HD15 236 aaKnown RBP4.14□□□□□ -1.75
PTPN22-207ENST00000528414 SPATS2LQ9NUQ6 558 aaKnown RBP4.14□□□□□ -1.75
PTPN22-207ENST00000528414 DDX18Q9NVP1 670 aaKnown RBP4.14□□□□□ -1.75
PTPN22-207ENST00000528414 ADAMTS8Q9UP79 889 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 WDR37Q9Y2I8 494 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 SLC4A4Q9Y6R1 1079 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 SPEF2Q9C093 1822 aa4.14□□□□□ -1.75
PTPN22-207ENST00000528414 C9IYK1 514 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 EYA2O00167 538 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 RNF113AO15541 343 aaKnown RBP4.13□□□□□ -1.75
PTPN22-207ENST00000528414 RTN3O95197 1032 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-207ENST00000528414 EPN2O95208 641 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 CD4P01730 458 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 KRT1P04264 644 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 IFIT2P09913 472 aaKnown RBP4.13□□□□□ -1.75
PTPN22-207ENST00000528414 ATF4P18848 351 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-207ENST00000528414 PDE4AP27815 886 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 IL6STP40189 918 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-207ENST00000528414 USP8P40818 1118 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 SMTNP53814 917 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 TMF1P82094 1093 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 ZNF211Q13398 564 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-207ENST00000528414 HLTFQ14527 1009 aaKnown RBP eCLIP4.13□□□□□ -1.75
PTPN22-207ENST00000528414 LRIT3Q3SXY7 679 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 SLC6A19Q695T7 634 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 IQCA1Q86XH1 822 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 TEX11Q8IYF3 940 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 NRSN1Q8IZ57 195 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 TTC39CQ8N584 583 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 PARD3BQ8TEW8 1205 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 FNBP1Q96RU3 617 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 TCF12Q99081 682 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 BCL2L12Q9HB09 334 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 HPS4Q9NQG7 708 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 KIAA1257Q9ULG3 409 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 GPR75-ASB3A0A0A6YYF3 556 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 MYO1CO00159 1063 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 APAF1O14727 1248 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 KDM1AO60341 852 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 ZBED4O75132 1171 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 TMEM127O75204 238 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 SNX4O95219 450 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 FGFR4P22455 802 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 SLC12A2P55011 1212 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 MFSD10Q14728 455 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 PPP2R2DQ66LE6 453 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 XRRA1Q6P2D8 792 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 CENPQQ7L2Z9 268 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-207ENST00000528414 RSRC2Q7L4I2 434 aaKnown RBP4.13□□□□□ -1.75
PTPN22-207ENST00000528414 TCEAL8Q8IYN2 117 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 TAB3Q8N5C8 712 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-207ENST00000528414 TMCO5AQ8N6Q1 288 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 GBP7Q8N8V2 638 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-207ENST00000528414 RNF214Q8ND24 703 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 CCDC148Q8NFR7 591 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 CNKSR1Q969H4 720 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 ATP6V1E2Q96A05 226 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 EXOC4Q96A65 974 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 SRRTQ9BXP5 876 aaKnown RBP4.13□□□□□ -1.75
PTPN22-207ENST00000528414 PLCB1Q9NQ66 1216 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 PPARGC1AQ9UBK2 798 aaKnown RBP4.13□□□□□ -1.75
PTPN22-207ENST00000528414 EIF2B4Q9UI10 523 aaKnown RBP4.13□□□□□ -1.75
PTPN22-207ENST00000528414 ZNF510Q9Y2H8 683 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 GAKO14976 1311 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 ZNF541Q9H0D2 1346 aa4.13□□□□□ -1.75
PTPN22-207ENST00000528414 A0A1B0GUL7 405 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms