RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 PAN2Q504Q3 1202 aaKnown RBP8.29□□□□□ -1.08
PCF11-202ENST00000528336 TM4SF20Q53R12 229 aa8.29□□□□□ -1.08
PCF11-202ENST00000528336 EGFLAMQ63HQ2 1017 aa8.29□□□□□ -1.08
PCF11-202ENST00000528336 TEPPQ6URK8 271 aa8.29□□□□□ -1.08
PCF11-202ENST00000528336 DDX1Q92499 740 aaKnown RBP8.29□□□□□ -1.08
PCF11-202ENST00000528336 NOX5Q96PH1 765 aa8.29□□□□□ -1.08
PCF11-202ENST00000528336 PUS7Q96PZ0 661 aaKnown RBP8.29□□□□□ -1.08
PCF11-202ENST00000528336 TARS2Q9BW92 718 aaKnown RBP8.29□□□□□ -1.08
PCF11-202ENST00000528336 EPB41L4AQ9HCS5 686 aaPredicted RBP8.29□□□□□ -1.08
PCF11-202ENST00000528336 FAM90A27PA6NNH2 459 aa8.28□□□□□ -1.08
PCF11-202ENST00000528336 SCDO00767 359 aa8.28□□□□□ -1.08
PCF11-202ENST00000528336 KRT37O76014 449 aa8.28□□□□□ -1.08
PCF11-202ENST00000528336 EPHA5P54756 1037 aa8.28□□□□□ -1.08
PCF11-202ENST00000528336 FAM129CQ86XR2 697 aa8.28□□□□□ -1.08
PCF11-202ENST00000528336 PWWP2AQ96N64 755 aa8.28□□□□□ -1.08
PCF11-202ENST00000528336 CABP5Q9NP86 173 aa8.28□□□□□ -1.08
PCF11-202ENST00000528336 RBPJLQ9UBG7 517 aa8.28□□□□□ -1.08
PCF11-202ENST00000528336 CADPSQ9ULU8 1353 aa8.27□□□□□ -1.09
PCF11-202ENST00000528336 SLC12A8A0AV02 714 aa8.27□□□□□ -1.09
PCF11-202ENST00000528336 ACOT7O00154 380 aa8.27□□□□□ -1.09
PCF11-202ENST00000528336 FAHP16930 419 aa8.27□□□□□ -1.09
PCF11-202ENST00000528336 PTPN1P18031 435 aaKnown RBP8.27□□□□□ -1.09
PCF11-202ENST00000528336 PCBP1Q15365 356 aaKnown RBP eCLIP8.27□□□□□ -1.09
PCF11-202ENST00000528336 ZNF385BQ569K4 471 aa8.27□□□□□ -1.09
PCF11-202ENST00000528336 FIGNQ5HY92 759 aa8.27□□□□□ -1.09
PCF11-202ENST00000528336 CPZQ66K79 652 aa8.27□□□□□ -1.09
PCF11-202ENST00000528336 FSTL4Q6MZW2 842 aa8.27□□□□□ -1.09
PCF11-202ENST00000528336 HHIPL2Q6UWX4 724 aa8.27□□□□□ -1.09
PCF11-202ENST00000528336 TTLL11Q8NHH1 800 aa8.27□□□□□ -1.09
PCF11-202ENST00000528336 GORASP1Q9BQQ3 440 aa8.27□□□□□ -1.09
PCF11-202ENST00000528336 MTFR1LQ9H019 292 aa8.27□□□□□ -1.09
PCF11-202ENST00000528336 IRF2BPLQ9H1B7 796 aa8.27□□□□□ -1.09
PCF11-202ENST00000528336 NGRNQ9NPE2 291 aaKnown RBP8.27□□□□□ -1.09
PCF11-202ENST00000528336 PMF1-BGLAPU3KQ54 211 aa8.27□□□□□ -1.09
PCF11-202ENST00000528336 PTPDC1A2A3K4 754 aa8.26□□□□□ -1.09
PCF11-202ENST00000528336 FAM83GA6ND36 823 aa8.26□□□□□ -1.09
PCF11-202ENST00000528336 CBX4O00257 560 aa8.26□□□□□ -1.09
PCF11-202ENST00000528336 RFXAPO00287 272 aa8.26□□□□□ -1.09
PCF11-202ENST00000528336 TRAF5O00463 557 aa8.26□□□□□ -1.09
PCF11-202ENST00000528336 PLA2G1BP04054 148 aaKnown RBP8.26□□□□□ -1.09
PCF11-202ENST00000528336 SMAD4Q13485 552 aaKnown RBP8.26□□□□□ -1.09
PCF11-202ENST00000528336 SEC23AQ15436 765 aa8.26□□□□□ -1.09
PCF11-202ENST00000528336 TMC5Q6UXY8 1006 aa8.26□□□□□ -1.09
PCF11-202ENST00000528336 CHST14Q8NCH0 376 aa8.26□□□□□ -1.09
PCF11-202ENST00000528336 A0A087X0B3 334 aa8.25□□□□□ -1.09
PCF11-202ENST00000528336 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.25□□□□□ -1.09
PCF11-202ENST00000528336 NUAK1O60285 661 aa8.25□□□□□ -1.09
PCF11-202ENST00000528336 PDE8AO60658 829 aa8.25□□□□□ -1.09
PCF11-202ENST00000528336 CLASP2O75122 1294 aaKnown RBP8.25□□□□□ -1.09
PCF11-202ENST00000528336 MECP2P51608 486 aaKnown RBP8.25□□□□□ -1.09
PCF11-202ENST00000528336 ARHGAP44Q17R89 818 aa8.25□□□□□ -1.09
PCF11-202ENST00000528336 PKN3Q6P5Z2 889 aa8.25□□□□□ -1.09
PCF11-202ENST00000528336 AHI1Q8N157 1196 aa8.25□□□□□ -1.09
PCF11-202ENST00000528336 LEO1Q8WVC0 666 aaPredicted RBP8.25□□□□□ -1.09
PCF11-202ENST00000528336 ZBTB8AQ96BR9 441 aa8.25□□□□□ -1.09
PCF11-202ENST00000528336 PRAMEF25A6NGN4 478 aa8.24□□□□□ -1.09
PCF11-202ENST00000528336 POU3F2P20265 443 aaPredicted RBP8.24□□□□□ -1.09
PCF11-202ENST00000528336 MASP1P48740 699 aa8.24□□□□□ -1.09
PCF11-202ENST00000528336 IRF9Q00978 393 aa8.24□□□□□ -1.09
PCF11-202ENST00000528336 SKOR2Q2VWA4 1001 aaPredicted RBP8.24□□□□□ -1.09
PCF11-202ENST00000528336 CIAPIN1Q6FI81 312 aa8.24□□□□□ -1.09
PCF11-202ENST00000528336 NOSTRINQ8IVI9 506 aa8.24□□□□□ -1.09
PCF11-202ENST00000528336 NXPE1Q8N323 547 aa8.24□□□□□ -1.09
PCF11-202ENST00000528336 PPM1KQ8N3J5 372 aa8.24□□□□□ -1.09
PCF11-202ENST00000528336 FNIP1Q8TF40 1166 aa8.24□□□□□ -1.09
PCF11-202ENST00000528336 BOCQ9BWV1 1114 aa8.24□□□□□ -1.09
PCF11-202ENST00000528336 PDGFDQ9GZP0 370 aaPredicted RBP8.24□□□□□ -1.09
PCF11-202ENST00000528336 WASF3Q9UPY6 502 aa8.24□□□□□ -1.09
PCF11-202ENST00000528336 GSG1L2A8MUP6 293 aa8.23□□□□□ -1.09
PCF11-202ENST00000528336 HIP1RO75146 1068 aa8.23□□□□□ -1.09
PCF11-202ENST00000528336 C4BPAP04003 597 aaKnown RBP8.23□□□□□ -1.09
PCF11-202ENST00000528336 ZBTB48P10074 688 aaPredicted RBP8.23□□□□□ -1.09
PCF11-202ENST00000528336 GJA4P35212 333 aa8.23□□□□□ -1.09
PCF11-202ENST00000528336 TMEM132BQ14DG7 1078 aa8.23□□□□□ -1.09
PCF11-202ENST00000528336 VMACQ2NL98 169 aa8.23□□□□□ -1.09
PCF11-202ENST00000528336 LIPIQ6XZB0 460 aa8.23□□□□□ -1.09
PCF11-202ENST00000528336 UBR7Q8N806 425 aa8.23□□□□□ -1.09
PCF11-202ENST00000528336 C11orf84Q9BUA3 381 aaPredicted RBP8.23□□□□□ -1.09
PCF11-202ENST00000528336 IFT57Q9NWB7 429 aa8.23□□□□□ -1.09
PCF11-202ENST00000528336 B4GALT6Q9UBX8 382 aa8.23□□□□□ -1.09
PCF11-202ENST00000528336 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.23□□□□□ -1.09
PCF11-202ENST00000528336 ZKSCAN5Q9Y2L8 839 aa8.23□□□□□ -1.09
PCF11-202ENST00000528336 SBNO2Q9Y2G9 1366 aa8.22□□□□□ -1.09
PCF11-202ENST00000528336 ZNF891A8MT65 544 aaPredicted RBP8.22□□□□□ -1.09
PCF11-202ENST00000528336 AFF3P51826 1226 aaKnown RBP8.22□□□□□ -1.09
PCF11-202ENST00000528336 ITGA1P56199 1179 aa8.22□□□□□ -1.09
PCF11-202ENST00000528336 PHF19Q5T6S3 580 aa8.22□□□□□ -1.09
PCF11-202ENST00000528336 CD276Q5ZPR3 534 aa8.22□□□□□ -1.09
PCF11-202ENST00000528336 VASNQ6EMK4 673 aa8.22□□□□□ -1.09
PCF11-202ENST00000528336 OTOP1Q7RTM1 612 aa8.22□□□□□ -1.09
PCF11-202ENST00000528336 PROSER1Q86XN7 944 aa8.22□□□□□ -1.09
PCF11-202ENST00000528336 LRRC56Q8IYG6 542 aaPredicted RBP8.22□□□□□ -1.09
PCF11-202ENST00000528336 DACT3Q96B18 629 aaPredicted RBP8.22□□□□□ -1.09
PCF11-202ENST00000528336 ZSWIM3Q96MP5 696 aa8.22□□□□□ -1.09
PCF11-202ENST00000528336 PCDH18Q9HCL0 1135 aa8.22□□□□□ -1.09
PCF11-202ENST00000528336 KCNH7Q9NS40 1196 aa8.22□□□□□ -1.09
PCF11-202ENST00000528336 DBX1A6NMT0 343 aa8.21□□□□□ -1.1
PCF11-202ENST00000528336 ENO2P09104 434 aaPredicted RBP8.21□□□□□ -1.1
PCF11-202ENST00000528336 CFPP27918 469 aa8.21□□□□□ -1.1
PCF11-202ENST00000528336 PFKPQ01813 784 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms