RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 E2F4Q16254 413 aa21.04■□□□□ 0.96
SMPD1-203ENST00000527275 OTOP1Q7RTM1 612 aa21.04■□□□□ 0.96
SMPD1-203ENST00000527275 SPATA20Q8TB22 786 aa21.04■□□□□ 0.96
SMPD1-203ENST00000527275 USP6NLQ92738 828 aa21.04■□□□□ 0.96
SMPD1-203ENST00000527275 RIT2Q99578 217 aa21.04■□□□□ 0.96
SMPD1-203ENST00000527275 SLC5A4Q9NY91 659 aa21.04■□□□□ 0.96
SMPD1-203ENST00000527275 DHX15O43143 795 aaKnown RBP21.04■□□□□ 0.96
SMPD1-203ENST00000527275 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.04■□□□□ 0.96
SMPD1-203ENST00000527275 CDHR1Q96JP9 859 aa21.04■□□□□ 0.96
SMPD1-203ENST00000527275 ZSWIM8A7E2V4 1837 aa21.04■□□□□ 0.96
SMPD1-203ENST00000527275 ZNF236Q9UL36 1845 aa21.04■□□□□ 0.96
SMPD1-203ENST00000527275 MGAMO43451 1857 aa21.04■□□□□ 0.96
SMPD1-203ENST00000527275 GOLGA6L6A8MZA4 724 aa21.03■□□□□ 0.96
SMPD1-203ENST00000527275 SPATA31C2B4DYI2 1134 aa21.03■□□□□ 0.96
SMPD1-203ENST00000527275 IKBKBO14920 756 aa21.03■□□□□ 0.96
SMPD1-203ENST00000527275 CYP2B6P20813 491 aa21.03■□□□□ 0.96
SMPD1-203ENST00000527275 NCAPHQ15003 741 aa21.03■□□□□ 0.96
SMPD1-203ENST00000527275 MAMDC4Q6UXC1 1216 aa21.03■□□□□ 0.96
SMPD1-203ENST00000527275 FBXO16Q8IX29 292 aaPredicted RBP21.03■□□□□ 0.96
SMPD1-203ENST00000527275 TRIML1Q8N9V2 468 aa21.03■□□□□ 0.96
SMPD1-203ENST00000527275 SOCS4Q8WXH5 440 aa21.03■□□□□ 0.96
SMPD1-203ENST00000527275 LRRC37A2A6NM11 1700 aa21.03■□□□□ 0.96
SMPD1-203ENST00000527275 DDX39AO00148 427 aaKnown RBP21.03■□□□□ 0.96
SMPD1-203ENST00000527275 HOXC6P09630 235 aa21.03■□□□□ 0.96
SMPD1-203ENST00000527275 CLCN1P35523 988 aa21.03■□□□□ 0.96
SMPD1-203ENST00000527275 TPM4P67936 248 aa21.03■□□□□ 0.96
SMPD1-203ENST00000527275 MORC3Q14149 939 aa21.03■□□□□ 0.96
SMPD1-203ENST00000527275 MMTAG2Q9BU76 263 aaKnown RBP21.03■□□□□ 0.96
SMPD1-203ENST00000527275 CHMP2AO43633 222 aa21.02■□□□□ 0.96
SMPD1-203ENST00000527275 SP2Q02086 613 aa21.02■□□□□ 0.96
SMPD1-203ENST00000527275 KARSQ15046 597 aaKnown RBP21.02■□□□□ 0.96
SMPD1-203ENST00000527275 NCAPH2Q6IBW4 605 aa21.02■□□□□ 0.96
SMPD1-203ENST00000527275 DRC7Q8IY82 874 aa21.02■□□□□ 0.96
SMPD1-203ENST00000527275 TINF2Q9BSI4 451 aa21.02■□□□□ 0.96
SMPD1-203ENST00000527275 CCSER1Q9C0I3 900 aa21.02■□□□□ 0.96
SMPD1-203ENST00000527275 BCAS3Q9H6U6 928 aa21.02■□□□□ 0.96
SMPD1-203ENST00000527275 TBC1D22BQ9NU19 505 aa21.02■□□□□ 0.96
SMPD1-203ENST00000527275 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.02■□□□□ 0.96
SMPD1-203ENST00000527275 HTTP42858 3142 aa21.02■□□□□ 0.95
SMPD1-203ENST00000527275 KCNA2P16389 499 aa21.02■□□□□ 0.95
SMPD1-203ENST00000527275 ICAM3P32942 547 aa21.02■□□□□ 0.95
SMPD1-203ENST00000527275 RGS2P41220 211 aa21.02■□□□□ 0.95
SMPD1-203ENST00000527275 PPP2R5CQ13362 524 aa21.02■□□□□ 0.95
SMPD1-203ENST00000527275 TEKT3Q9BXF9 490 aa21.02■□□□□ 0.95
SMPD1-203ENST00000527275 GPR25O00155 361 aa21.01■□□□□ 0.95
SMPD1-203ENST00000527275 EML1O00423 815 aa21.01■□□□□ 0.95
SMPD1-203ENST00000527275 SNAI1O95863 264 aaPredicted RBP21.01■□□□□ 0.95
SMPD1-203ENST00000527275 DPYDQ12882 1025 aa21.01■□□□□ 0.95
SMPD1-203ENST00000527275 PDXDC2PQ6P474 469 aa21.01■□□□□ 0.95
SMPD1-203ENST00000527275 B3GNT9Q6UX72 402 aa21.01■□□□□ 0.95
SMPD1-203ENST00000527275 CABP7Q86V35 215 aa21.01■□□□□ 0.95
SMPD1-203ENST00000527275 MLKLQ8NB16 471 aa21.01■□□□□ 0.95
SMPD1-203ENST00000527275 MRFAP1L1Q96HT8 127 aa21.01■□□□□ 0.95
SMPD1-203ENST00000527275 ZNF830Q96NB3 372 aaPredicted RBP21.01■□□□□ 0.95
SMPD1-203ENST00000527275 UNC45AQ9H3U1 944 aa21.01■□□□□ 0.95
SMPD1-203ENST00000527275 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.01■□□□□ 0.95
SMPD1-203ENST00000527275 FLRT1Q9NZU1 646 aa21.01■□□□□ 0.95
SMPD1-203ENST00000527275 TPM3P06753 285 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 CDC25BP30305 580 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 KIF22Q14807 665 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 CCL14Q16627 93 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 KRT79Q5XKE5 535 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 RASSF8Q8NHQ8 419 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 SNX29Q8TEQ0 813 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 PLIN2Q99541 437 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 SAGE1Q9NXZ1 904 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 CASP1P29466 404 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 MYL5Q02045 173 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 STAMQ92783 540 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 APBA2Q99767 749 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 PDGFCQ9NRA1 345 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 DISC1Q9NRI5 854 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 DACH1Q9UI36 760 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 GABRQQ9UN88 632 aa21■□□□□ 0.95
SMPD1-203ENST00000527275 TGFB3P10600 412 aa20.99■□□□□ 0.95
SMPD1-203ENST00000527275 MAP2K1Q02750 393 aaPredicted RBP20.99■□□□□ 0.95
SMPD1-203ENST00000527275 GSDMAQ96QA5 445 aa20.99■□□□□ 0.95
SMPD1-203ENST00000527275 SORBS3O60504 671 aa20.99■□□□□ 0.95
SMPD1-203ENST00000527275 STAT6P42226 847 aa20.99■□□□□ 0.95
SMPD1-203ENST00000527275 FLT3LGP49771 235 aa20.99■□□□□ 0.95
SMPD1-203ENST00000527275 RRAGBQ5VZM2 374 aa20.99■□□□□ 0.95
SMPD1-203ENST00000527275 MSL3Q8N5Y2 521 aaKnown RBP20.99■□□□□ 0.95
SMPD1-203ENST00000527275 SENP7Q9BQF6 1050 aa20.99■□□□□ 0.95
SMPD1-203ENST00000527275 KATNBL1Q9H079 304 aa20.99■□□□□ 0.95
SMPD1-203ENST00000527275 TSKSQ9UJT2 592 aa20.99■□□□□ 0.95
SMPD1-203ENST00000527275 SYNGAP1Q96PV0 1343 aa20.98■□□□□ 0.95
SMPD1-203ENST00000527275 DOCK5Q9H7D0 1870 aa20.98■□□□□ 0.95
SMPD1-203ENST00000527275 ARIH2O95376 493 aa20.98■□□□□ 0.95
SMPD1-203ENST00000527275 CCNE2O96020 404 aa20.98■□□□□ 0.95
SMPD1-203ENST00000527275 UBA1P22314 1058 aaKnown RBP20.98■□□□□ 0.95
SMPD1-203ENST00000527275 PRKCZQ05513 592 aa20.98■□□□□ 0.95
SMPD1-203ENST00000527275 LY6KQ17RY6 165 aa20.98■□□□□ 0.95
SMPD1-203ENST00000527275 CD99L2Q8TCZ2 262 aa20.98■□□□□ 0.95
SMPD1-203ENST00000527275 MTRQ99707 1265 aa20.98■□□□□ 0.95
SMPD1-203ENST00000527275 BEGAINQ9BUH8 593 aa20.98■□□□□ 0.95
SMPD1-203ENST00000527275 GTPBP6O43824 516 aaPredicted RBP20.97■□□□□ 0.95
SMPD1-203ENST00000527275 ECM1Q16610 540 aa20.97■□□□□ 0.95
SMPD1-203ENST00000527275 TAPT1Q6NXT6 567 aa20.97■□□□□ 0.95
SMPD1-203ENST00000527275 CYFIP1Q7L576 1253 aa20.97■□□□□ 0.95
SMPD1-203ENST00000527275 ABHD16BQ9H3Z7 469 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms