RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 MEI1Q5TIA1 1274 aa8.35□□□□□ -1.07
CASP4-205ENST00000525116 OLFML2BQ68BL8 750 aa8.35□□□□□ -1.07
CASP4-205ENST00000525116 LBX2Q6XYB7 198 aa8.35□□□□□ -1.07
CASP4-205ENST00000525116 CCNJLQ8IV13 435 aa8.35□□□□□ -1.07
CASP4-205ENST00000525116 NPAS3Q8IXF0 933 aa8.35□□□□□ -1.07
CASP4-205ENST00000525116 MICALL1Q8N3F8 863 aa8.35□□□□□ -1.07
CASP4-205ENST00000525116 CEP120Q8N960 986 aa8.35□□□□□ -1.07
CASP4-205ENST00000525116 SSH3Q8TE77 659 aa8.35□□□□□ -1.07
CASP4-205ENST00000525116 TRIM43Q96BQ3 446 aaPredicted RBP8.35□□□□□ -1.07
CASP4-205ENST00000525116 EAF2Q96CJ1 260 aaPredicted RBP8.35□□□□□ -1.07
CASP4-205ENST00000525116 SPATC1LQ9H0A9 340 aa8.35□□□□□ -1.07
CASP4-205ENST00000525116 TTYH1Q9H313 450 aaPredicted RBP8.35□□□□□ -1.07
CASP4-205ENST00000525116 PDLIM7Q9NR12 457 aa8.35□□□□□ -1.07
CASP4-205ENST00000525116 DZANK1Q9NVP4 752 aa8.35□□□□□ -1.07
CASP4-205ENST00000525116 MCM9Q9NXL9 1143 aa8.35□□□□□ -1.07
CASP4-205ENST00000525116 LTBP2Q14767 1821 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 TMEM238LA0A1B0GVL6 79 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 SMNDC1O75940 238 aaKnown RBP eCLIP8.34□□□□□ -1.07
CASP4-205ENST00000525116 ARAFP10398 606 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 CYP2D6P10635 497 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 EIF2AK2P19525 551 aaKnown RBP8.34□□□□□ -1.07
CASP4-205ENST00000525116 ADH6P28332 368 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 EPHB4P54760 987 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 PCBP4P57723 403 aaKnown RBP8.34□□□□□ -1.07
CASP4-205ENST00000525116 LRRC41Q15345 812 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 FAM47AQ5JRC9 791 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 KIAA1755Q5JYT7 1200 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 CERS3Q8IU89 383 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 SPICE1Q8N0Z3 855 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 GLIS3Q8NEA6 775 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 TGIF2Q9GZN2 237 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 ABCB6Q9NP58 842 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 XPNPEP3Q9NQH7 507 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 SLC5A4Q9NY91 659 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 GGT7Q9UJ14 662 aa8.34□□□□□ -1.07
CASP4-205ENST00000525116 PDE2AO00408 941 aaPredicted RBP8.33□□□□□ -1.08
CASP4-205ENST00000525116 PQBP1O60828 265 aaKnown RBP8.33□□□□□ -1.08
CASP4-205ENST00000525116 FLOT1O75955 427 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 PGK1P00558 417 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 PGK2P07205 417 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 FCER1AP12319 257 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 ITGB8P26012 769 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 SMAD3P84022 425 aaKnown RBP8.33□□□□□ -1.08
CASP4-205ENST00000525116 NAALADL2Q58DX5 795 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 ZKSCAN2Q63HK3 967 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 HFE2Q6ZVN8 426 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 AACSQ86V21 672 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 CLEC10AQ8IUN9 316 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 TMEM102Q8N9M5 508 aaPredicted RBP8.33□□□□□ -1.08
CASP4-205ENST00000525116 SLC44A5Q8NCS7 719 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 SHCBP1Q8NEM2 672 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 TNFRSF25Q93038 417 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 ATG4CQ96DT6 458 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 MAML3Q96JK9 1138 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 RNPC3Q96LT9 517 aaKnown RBP8.33□□□□□ -1.08
CASP4-205ENST00000525116 CNTNAP3BQ96NU0 1288 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 TCF12Q99081 682 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 RIOK1Q9BRS2 568 aaKnown RBP8.33□□□□□ -1.08
CASP4-205ENST00000525116 PBX4Q9BYU1 374 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 CNTNAP3Q9BZ76 1288 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 CRNKL1Q9BZJ0 848 aaKnown RBP8.33□□□□□ -1.08
CASP4-205ENST00000525116 BHLHE41Q9C0J9 482 aaPredicted RBP8.33□□□□□ -1.08
CASP4-205ENST00000525116 MROH8Q9H579 483 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 PRDM6Q9NQX0 595 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 RLFQ13129 1914 aa8.33□□□□□ -1.08
CASP4-205ENST00000525116 J3QW42 95 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 CLTBP09497 229 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 RARBP10826 455 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 ACPPP15309 386 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 RAG1P15918 1043 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 TAL1P17542 331 aaPredicted RBP8.32□□□□□ -1.08
CASP4-205ENST00000525116 GABPAQ06546 454 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 RAD51AP2Q09MP3 1159 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 GNL2Q13823 731 aaKnown RBP8.32□□□□□ -1.08
CASP4-205ENST00000525116 SNX17Q15036 470 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 SLC9C2Q5TAH2 1124 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 RNF180Q86T96 592 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 FAM35AQ86V20 835 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 ITPRIPQ8IWB1 547 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 ZNF654Q8IZM8 581 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 C3orf58Q8NDZ4 430 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 SDR42E1Q8WUS8 393 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 PPM1EQ8WY54 764 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 LENG1Q96BZ8 264 aaPredicted RBP8.32□□□□□ -1.08
CASP4-205ENST00000525116 DYNLL2Q96FJ2 89 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 MMP19Q99542 508 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 NOC4LQ9BVI4 516 aaKnown RBP8.32□□□□□ -1.08
CASP4-205ENST00000525116 TMEM39AQ9NV64 488 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 EXOC6BQ9Y2D4 811 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.32□□□□□ -1.08
CASP4-205ENST00000525116 NOP58Q9Y2X3 529 aaKnown RBP8.32□□□□□ -1.08
CASP4-205ENST00000525116 TACC3Q9Y6A5 838 aa8.32□□□□□ -1.08
CASP4-205ENST00000525116 ZNF532Q9HCE3 1301 aa8.31□□□□□ -1.08
CASP4-205ENST00000525116 ZBTB42B2RXF5 422 aa8.31□□□□□ -1.08
CASP4-205ENST00000525116 C2CD2LO14523 706 aa8.31□□□□□ -1.08
CASP4-205ENST00000525116 AKR1B1P15121 316 aa8.31□□□□□ -1.08
CASP4-205ENST00000525116 PDE6AP16499 860 aa8.31□□□□□ -1.08
CASP4-205ENST00000525116 FPGSQ05932 587 aa8.31□□□□□ -1.08
CASP4-205ENST00000525116 KCTD2Q14681 263 aa8.31□□□□□ -1.08
CASP4-205ENST00000525116 TMEM132BQ14DG7 1078 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms