RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 DIAPH1O60610 1272 aaKnown RBP4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 TADA3O75528 432 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 GRK2P25098 689 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 GRK3P35626 688 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 KIZQ2M2Z5 673 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 EMC4Q5J8M3 183 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 STYK1Q6J9G0 422 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 RSPO2Q6UXX9 243 aaPredicted RBP4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 LBX2Q6XYB7 198 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 PLEKHH3Q7Z736 793 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 CHST13Q8NET6 341 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 PIP4K2CQ8TBX8 421 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 PMFBP1Q8TBY8 1022 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 TOE1Q96GM8 510 aaKnown RBP4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 KRTAP17-1Q9BYP8 105 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 CDIP1Q9H305 208 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 DTLQ9NZJ0 730 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 MYOTQ9UBF9 498 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 FGD5Q6ZNL6 1462 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 KIF21AQ7Z4S6 1674 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 CTTNBP2Q8WZ74 1663 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 CLIP1P30622 1438 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 VPS8Q8N3P4 1428 aa4.79□□□□□ -1.64
LINCR-0001-203ENST00000524047 TCRBV5S2A0A599 114 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 LAMTOR5O43504 91 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 AKAP8O43823 692 aaKnown RBP4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 MAFKO60675 156 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 CYP7B1O75881 506 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 IL13P35225 146 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 GPR85P60893 370 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 SF3A1Q15459 793 aaKnown RBP4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 FAM209AQ5JX71 171 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 PRAMEF18Q5VWM3 479 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 DPH6Q7L8W6 267 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 SCUBE1Q8IWY4 988 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 IFNL3Q8IZI9 196 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 ZBTB38Q8NAP3 1195 aaPredicted RBP4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 ARMC5Q96C12 935 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 MBD6Q96DN6 1003 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 YTHDC1Q96MU7 727 aaKnown RBP4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 CLIC6Q96NY7 704 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 DEPDC7Q96QD5 511 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 HSPBP1Q9NZL4 362 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 TRAF6Q9Y4K3 522 aa4.78□□□□□ -1.64
LINCR-0001-203ENST00000524047 KDM2BQ8NHM5 1336 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 TRBV23-1A0A0A0MS06 115 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 FAM221BA6H8Z2 402 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 SOD2P04179 222 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 FAM153BP0C7A2 387 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 GNAT1P11488 350 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 COL6A2P12110 1019 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 SERINC3Q13530 473 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 RASA3Q14644 834 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 FOXB2Q5VYV0 432 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 PKN3Q6P5Z2 889 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 TEPPQ6URK8 271 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 LIMS2Q7Z4I7 341 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 RBM12BQ8IXT5 1001 aaKnown RBP4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 WRNIP1Q96S55 665 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 SRPK1Q96SB4 655 aaKnown RBP4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 TMEM209Q96SK2 561 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 DNAJC2Q99543 621 aaKnown RBP4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 ZFYVE21Q9BQ24 234 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 ALG1Q9BT22 464 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 TMEM168Q9H0V1 697 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 SMOC1Q9H4F8 434 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 L2HGDHQ9H9P8 463 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 SLC6A20Q9NP91 592 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 SNTG2Q9NY99 539 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 PPP4R1LQ9P1A2 415 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 ASXL2Q76L83 1435 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 ABCA10Q8WWZ4 1543 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 TOPBP1Q92547 1522 aa4.77□□□□□ -1.65
LINCR-0001-203ENST00000524047 CUX2O14529 1486 aa4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 SLC27A2O14975 620 aa4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 LRG1P02750 347 aa4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 CYP1A1P04798 512 aaPredicted RBP4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 MLLT6P55198 1093 aaPredicted RBP4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 SUMO1P63165 101 aaKnown RBP4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 GRIN1Q05586 938 aa4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 RBL2Q08999 1139 aa4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 SPIRE1Q08AE8 756 aa4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 OTOP3Q7RTS5 596 aa4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 MTDHQ86UE4 582 aaKnown RBP4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 TRIM48Q8IWZ4 208 aa4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 PHOSPHO1Q8TCT1 267 aa4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 ZSWIM3Q96MP5 696 aa4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 IPPKQ9H8X2 491 aa4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 ASH2LQ9UBL3 628 aa4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 ST6GALNAC2Q9UJ37 374 aa4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 TSC22D4Q9Y3Q8 395 aa4.76□□□□□ -1.65
LINCR-0001-203ENST00000524047 PDS5BQ9NTI5 1447 aa4.75□□□□□ -1.65
LINCR-0001-203ENST00000524047 FAM47E-STBD1D6RA91 191 aa4.75□□□□□ -1.65
LINCR-0001-203ENST00000524047 NKRFO15226 690 aaKnown RBP eCLIP4.75□□□□□ -1.65
LINCR-0001-203ENST00000524047 EPHB4P54760 987 aa4.75□□□□□ -1.65
LINCR-0001-203ENST00000524047 PPP2CBP62714 309 aa4.75□□□□□ -1.65
LINCR-0001-203ENST00000524047 PPP2CAP67775 309 aa4.75□□□□□ -1.65
LINCR-0001-203ENST00000524047 TUSC3Q13454 348 aa4.75□□□□□ -1.65
LINCR-0001-203ENST00000524047 SOGA3Q5TF21 947 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms