RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 PPM1JQ5JR12 505 aa6.53□□□□□ -1.36
CTNNA1-239ENST00000523685 DCAF15Q66K64 600 aa6.53□□□□□ -1.36
CTNNA1-239ENST00000523685 APOBEC3HQ6NTF7 200 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-239ENST00000523685 CD163Q86VB7 1156 aa6.53□□□□□ -1.36
CTNNA1-239ENST00000523685 FAM9BQ8IZU0 186 aa6.53□□□□□ -1.36
CTNNA1-239ENST00000523685 ANKRD44Q8N8A2 993 aa6.53□□□□□ -1.36
CTNNA1-239ENST00000523685 C2CD4AQ8NCU7 369 aaPredicted RBP6.53□□□□□ -1.36
CTNNA1-239ENST00000523685 DPF3Q92784 378 aa6.53□□□□□ -1.36
CTNNA1-239ENST00000523685 HOOK2Q96ED9 719 aa6.53□□□□□ -1.36
CTNNA1-239ENST00000523685 UBL7Q96S82 380 aaPredicted RBP6.53□□□□□ -1.36
CTNNA1-239ENST00000523685 ZNF341Q9BYN7 854 aa6.53□□□□□ -1.36
CTNNA1-239ENST00000523685 GSX1Q9H4S2 264 aaPredicted RBP6.53□□□□□ -1.36
CTNNA1-239ENST00000523685 POLR3KQ9Y2Y1 108 aaPredicted RBP6.53□□□□□ -1.36
CTNNA1-239ENST00000523685 MAST3O60307 1309 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 HTTP42858 3142 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 OTOFQ9HC10 1997 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 PRAMEF27A3QJZ7 478 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 C1QTNF9BB2RNN3 333 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 PDHXO00330 501 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 FANCGO15287 622 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 ANP32CO43423 234 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 PDE8BO95263 885 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 IFIT1P09914 478 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 CHRNA4P43681 627 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 PSMC4P43686 418 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 PREPP48147 710 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 SOX9P48436 509 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 NASPP49321 788 aaPredicted RBP6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 USP11P51784 963 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 PDE4BQ07343 736 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 PUM3Q15397 648 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 RNF214Q8ND24 703 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 RAET1EQ8TD07 263 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 FAM46AQ96IP4 442 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 ZDHHC15Q96MV8 337 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 WNT10AQ9GZT5 417 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 PRKAG2Q9UGJ0 569 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 ACTL7BQ9Y614 415 aa6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 MKI67P46013 3256 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-239ENST00000523685 MYPNQ86TC9 1320 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 ECM29Q5VYK3 1845 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 GAS2O43903 313 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 ATE1O95260 518 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 CYP2C8P10632 490 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 SLC5A1P13866 664 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 HOXD10P28358 340 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 CTGFP29279 349 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 PPATQ06203 517 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 NFIAQ12857 509 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 TTLL4Q14679 1199 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 SF3A1Q15459 793 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 RABL6Q3YEC7 729 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 ZBTB37Q5TC79 503 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 HHIPL2Q6UWX4 724 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 C17orf99Q6UX52 265 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 GK5Q6ZS86 529 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 FAM83AQ86UY5 434 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 VGLL2Q8N8G2 317 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 FAM151AQ8WW52 585 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 SREK1Q8WXA9 508 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 MEGF10Q96KG7 1140 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.51□□□□□ -1.371e-7■■□□□ 11.9
CTNNA1-239ENST00000523685 TANGO6Q9C0B7 1094 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 SIL1Q9H173 461 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 EHMT1Q9H9B1 1298 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 PIDD1Q9HB75 910 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 SRRDQ9UH36 339 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 DAGLAQ9Y4D2 1042 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 PCDHB14Q9Y5E9 798 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 A0A1B0GUL6 1792 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 CENPFP49454 3210 aa6.51□□□□□ -1.37
CTNNA1-239ENST00000523685 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 EYA2O00167 538 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 RNGTTO60942 597 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 CCL5P13501 91 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 PLCG1P19174 1290 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 PRDX5P30044 214 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 GRK4P32298 578 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 GSK3AP49840 483 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 PRMT2P55345 433 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 ETF1P62495 437 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 CLCQ05315 142 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 PRKCZQ05513 592 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 UVSSAQ2YD98 709 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 FKBP1CQ5VVH2 108 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 CDC42EP5Q6NZY7 148 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 GADL1Q6ZQY3 521 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 ANKRD23Q86SG2 305 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 ZFPM1Q8IX07 1006 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 WDR66Q8TBY9 1149 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 ZNF507Q8TCN5 953 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 LPIN2Q92539 896 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 SHISA4Q96DD7 197 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 PARK7Q99497 189 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 MRIQ9BWK5 157 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 ZCCHC17Q9NP64 241 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 FAM105AQ9NUU6 356 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 USP40Q9NVE5 1235 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 SUGT1Q9Y2Z0 365 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 CORINQ9Y5Q5 1042 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms