RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 DENND5AQ6IQ26 1287 aa6.36□□□□□ -1.39
NSMCE2-211ENST00000523549 TEPPQ6URK8 271 aa6.36□□□□□ -1.39
NSMCE2-211ENST00000523549 SH3RF3Q8TEJ3 882 aaPredicted RBP6.36□□□□□ -1.39
NSMCE2-211ENST00000523549 TOE1Q96GM8 510 aaKnown RBP6.36□□□□□ -1.39
NSMCE2-211ENST00000523549 SCAND2PQ9GZW5 306 aaPredicted RBP6.36□□□□□ -1.39
NSMCE2-211ENST00000523549 TCOF1Q13428 1488 aaKnown RBP6.35□□□□□ -1.39
NSMCE2-211ENST00000523549 ACVRL1P37023 503 aa6.35□□□□□ -1.39
NSMCE2-211ENST00000523549 PPP2CBP62714 309 aa6.35□□□□□ -1.39
NSMCE2-211ENST00000523549 PPP2CAP67775 309 aa6.35□□□□□ -1.39
NSMCE2-211ENST00000523549 PLEKHH3Q7Z736 793 aa6.35□□□□□ -1.39
NSMCE2-211ENST00000523549 ZNF227Q86WZ6 799 aa6.35□□□□□ -1.39
NSMCE2-211ENST00000523549 ZCCHC14Q8WYQ9 949 aaKnown RBP6.35□□□□□ -1.39
NSMCE2-211ENST00000523549 CCDC140Q96MF4 163 aa6.35□□□□□ -1.39
NSMCE2-211ENST00000523549 TMEM168Q9H0V1 697 aa6.35□□□□□ -1.39
NSMCE2-211ENST00000523549 SRRDQ9UH36 339 aa6.35□□□□□ -1.39
NSMCE2-211ENST00000523549 MEFVO15553 781 aaPredicted RBP6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 SUV39H1O43463 412 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 MYO1BO43795 1136 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 CPP00450 1065 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 CYP1A1P04798 512 aaPredicted RBP6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 C6P13671 934 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 LCP1P13796 627 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 TACR2P21452 398 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 LSAMPQ13449 338 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 CHRNA2Q15822 529 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 CRIP3Q6Q6R5 217 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 IGDCC4Q8TDY8 1250 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 PPP1R14AQ96A00 147 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 ANAPC16Q96DE5 110 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 WWC2-AS2Q96NR7 200 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 KLC2Q9H0B6 622 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 CDIP1Q9H305 208 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 L2HGDHQ9H9P8 463 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 COA3Q9Y2R0 106 aaPredicted RBP6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 NPFFR2Q9Y5X5 522 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 MYO3AQ8NEV4 1616 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 VWDEQ8N2E2 1590 aa6.34□□□□□ -1.39
NSMCE2-211ENST00000523549 TRAPPC8Q9Y2L5 1435 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 HECW1Q76N89 1606 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 NPEPPSL1A6NEC2 478 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 CYP7B1O75881 506 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 SNRPB2P08579 225 aaKnown RBP6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 ATF4P18848 351 aaPredicted RBP6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 LTBRP36941 435 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 ECI1P42126 302 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 GFRA1P56159 465 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 PRSS53Q2L4Q9 553 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 STEAP3Q658P3 488 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 C6orf15Q6UXA7 325 aaPredicted RBP6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 KISS1RQ969F8 398 aaPredicted RBP6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 C1orf159Q96HA4 380 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 ZSWIM3Q96MP5 696 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 CLIC6Q96NY7 704 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 PTPN18Q99952 460 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 YIPF4Q9BSR8 244 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 TGIF2Q9GZN2 237 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 ACBD3Q9H3P7 528 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 DISP1Q96F81 1524 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 DENND4BO75064 1496 aaPredicted RBP6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 PLA2R1Q13018 1463 aa6.33□□□□□ -1.4
NSMCE2-211ENST00000523549 SLPIP03973 132 aa6.32□□□□□ -1.4
NSMCE2-211ENST00000523549 COL6A1P12109 1028 aa6.32□□□□□ -1.4
NSMCE2-211ENST00000523549 R3HDM1Q15032 1099 aaKnown RBP6.32□□□□□ -1.4
NSMCE2-211ENST00000523549 SLC35F1Q5T1Q4 408 aa6.32□□□□□ -1.4
NSMCE2-211ENST00000523549 PROSER1Q86XN7 944 aa6.32□□□□□ -1.4
NSMCE2-211ENST00000523549 FAM178BQ8IXR5 827 aa6.32□□□□□ -1.4
NSMCE2-211ENST00000523549 KBTBD2Q8IY47 623 aa6.32□□□□□ -1.4
NSMCE2-211ENST00000523549 TMEM209Q96SK2 561 aa6.32□□□□□ -1.4
NSMCE2-211ENST00000523549 ZNF747Q9BV97 191 aa6.32□□□□□ -1.4
NSMCE2-211ENST00000523549 PCDHB4Q9Y5E5 795 aa6.32□□□□□ -1.4
NSMCE2-211ENST00000523549 PCDHA2Q9Y5H9 948 aa6.32□□□□□ -1.4
NSMCE2-211ENST00000523549 CDK12Q9NYV4 1490 aaPredicted RBP6.32□□□□□ -1.4
NSMCE2-211ENST00000523549 RGS12O14924 1447 aa6.32□□□□□ -1.4
NSMCE2-211ENST00000523549 WRNQ14191 1432 aaPredicted RBP eCLIP6.32□□□□□ -1.4
NSMCE2-211ENST00000523549 XIRP1Q702N8 1843 aaKnown RBP6.32□□□□□ -1.4
NSMCE2-211ENST00000523549 ABCA8O94911 1581 aa6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 NEURL4Q96JN8 1562 aa6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 RAPGEF2Q9Y4G8 1499 aa6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 PATE3B3GLJ2 98 aa6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 NFATC3Q12968 1075 aa6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 SV2CQ496J9 727 aa6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 ARHGEF18Q6ZSZ5 1173 aa6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 CIR1Q86X95 450 aaPredicted RBP6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 PPIL6Q8IXY8 311 aa6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 KLHL36Q8N4N3 616 aa6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 TMEM145Q8NBT3 493 aa6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 CDK5RAP1Q96SZ6 601 aaKnown RBP6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 SMOC1Q9H4F8 434 aa6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 CROTQ9UKG9 612 aa6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 LRP6O75581 1613 aa6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 FHOD3Q2V2M9 1422 aa6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 IQGAP2Q13576 1575 aa6.31□□□□□ -1.4
NSMCE2-211ENST00000523549 NHSL1Q5SYE7 1610 aa6.3□□□□□ -1.4
NSMCE2-211ENST00000523549 CYR61O00622 381 aa6.3□□□□□ -1.4
NSMCE2-211ENST00000523549 SMAD7O15105 426 aaKnown RBP6.3□□□□□ -1.4
NSMCE2-211ENST00000523549 SUSD5O60279 629 aa6.3□□□□□ -1.4
NSMCE2-211ENST00000523549 B4GALT4O60513 344 aa6.3□□□□□ -1.4
NSMCE2-211ENST00000523549 SLFN13Q68D06 897 aa6.3□□□□□ -1.4
NSMCE2-211ENST00000523549 PHOSPHO1Q8TCT1 267 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms