RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 CYP7A1P22680 504 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 KCNJ4P48050 445 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 ANAPC15P60006 121 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 TIMM10P62072 90 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 RNF4P78317 190 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 CYP27A1Q02318 531 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 CYP27C1Q4G0S4 372 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 METTL24Q5JXM2 366 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 CCDC158Q5M9N0 1113 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 SUSD4Q5VX71 490 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 TDRD10Q5VZ19 366 aaKnown RBP7.73□□□□□ -1.17
LINC00534-203ENST00000523406 CLEC4GQ6UXB4 293 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 LDHAL6AQ6ZMR3 332 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 C22orf34Q6ZV56 151 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 ZNF765Q7L2R6 523 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 NOP9Q86U38 636 aaKnown RBP7.73□□□□□ -1.17
LINC00534-203ENST00000523406 SYNE4Q8N205 404 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 FBXL6Q8N531 539 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 LINC00116Q8NCU8 138 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 TTLL11Q8NHH1 800 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 COX4I2Q96KJ9 171 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 SRPK1Q96SB4 655 aaKnown RBP7.73□□□□□ -1.17
LINC00534-203ENST00000523406 PUS3Q9BZE2 481 aaKnown RBP7.73□□□□□ -1.17
LINC00534-203ENST00000523406 GREM2Q9H772 168 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 PRDM5Q9NQX1 630 aaPredicted RBP7.73□□□□□ -1.17
LINC00534-203ENST00000523406 CNNM1Q9NRU3 951 aa7.73□□□□□ -1.17
LINC00534-203ENST00000523406 NUP188Q5SRE5 1749 aa7.72□□□□□ -1.17
LINC00534-203ENST00000523406 A0A1B0GUL7 405 aa7.72□□□□□ -1.17
LINC00534-203ENST00000523406 GSC2O15499 205 aa7.72□□□□□ -1.17
LINC00534-203ENST00000523406 PDPK1O15530 556 aa7.72□□□□□ -1.17
LINC00534-203ENST00000523406 MCM2P49736 904 aa7.72□□□□□ -1.17
LINC00534-203ENST00000523406 NEK4P51957 841 aa7.72□□□□□ -1.17
LINC00534-203ENST00000523406 CHMP4BP1P59074 171 aa7.72□□□□□ -1.17
LINC00534-203ENST00000523406 RASGRF1Q13972 1273 aa7.72□□□□□ -1.17
LINC00534-203ENST00000523406 CCDC152Q4G0S7 254 aa7.72□□□□□ -1.17
LINC00534-203ENST00000523406 ANKRD39Q53RE8 183 aa7.72□□□□□ -1.17
LINC00534-203ENST00000523406 TTC39AQ5SRH9 613 aa7.72□□□□□ -1.17
LINC00534-203ENST00000523406 AXDND1Q5T1B0 1012 aaPredicted RBP7.72□□□□□ -1.17
LINC00534-203ENST00000523406 SFRP5Q5T4F7 317 aa7.72□□□□□ -1.17
LINC00534-203ENST00000523406 HAUS7Q99871 368 aa7.72□□□□□ -1.17
LINC00534-203ENST00000523406 CHMP5Q9NZZ3 219 aa7.72□□□□□ -1.17
LINC00534-203ENST00000523406 GTF2IRD1Q9UHL9 959 aa7.72□□□□□ -1.17
LINC00534-203ENST00000523406 RAD50Q92878 1312 aa7.72□□□□□ -1.17
LINC00534-203ENST00000523406 ATRNO75882 1429 aa7.71□□□□□ -1.17
LINC00534-203ENST00000523406 SHOXO15266 292 aa7.71□□□□□ -1.18
LINC00534-203ENST00000523406 CBFA2T2O43439 604 aa7.71□□□□□ -1.18
LINC00534-203ENST00000523406 RPS6KA4O75676 772 aa7.71□□□□□ -1.18
LINC00534-203ENST00000523406 TP53P04637 393 aaPredicted RBP7.71□□□□□ -1.18
LINC00534-203ENST00000523406 IFIT1P09914 478 aaKnown RBP7.71□□□□□ -1.18
LINC00534-203ENST00000523406 HSPA4P34932 840 aa7.71□□□□□ -1.18
LINC00534-203ENST00000523406 NMIQ13287 307 aaPredicted RBP7.71□□□□□ -1.18
LINC00534-203ENST00000523406 ATP2B3Q16720 1220 aa7.71□□□□□ -1.18
LINC00534-203ENST00000523406 NBPF9Q3BBW0 867 aa7.71□□□□□ -1.18
LINC00534-203ENST00000523406 PTF1AQ7RTS3 328 aa7.71□□□□□ -1.18
LINC00534-203ENST00000523406 SHKBP1Q8TBC3 707 aa7.71□□□□□ -1.18
LINC00534-203ENST00000523406 Q96M66 194 aa7.71□□□□□ -1.18
LINC00534-203ENST00000523406 MPHOSPH8Q99549 860 aa7.71□□□□□ -1.18
LINC00534-203ENST00000523406 MKRN2Q9H000 416 aaKnown RBP7.71□□□□□ -1.18
LINC00534-203ENST00000523406 LSG1Q9H089 658 aaKnown RBP7.71□□□□□ -1.18
LINC00534-203ENST00000523406 SUSD2Q9UGT4 822 aa7.71□□□□□ -1.18
LINC00534-203ENST00000523406 UBN2Q6ZU65 1347 aa7.71□□□□□ -1.18
LINC00534-203ENST00000523406 TJP1Q07157 1748 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 CCDC85CA6NKD9 419 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 WDR64B1ANS9 1081 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 GOLIM4O00461 696 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 NPHP1O15259 732 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 DYRK3O43781 588 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 LRRN2O75325 713 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 IGHA1P01876 353 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 ZNF865P0CJ78 1059 aaPredicted RBP7.7□□□□□ -1.18
LINC00534-203ENST00000523406 ZKSCAN1P17029 563 aaPredicted RBP7.7□□□□□ -1.18
LINC00534-203ENST00000523406 HMGB2P26583 209 aaKnown RBP7.7□□□□□ -1.18
LINC00534-203ENST00000523406 IGHMBP2P38935 993 aaKnown RBP7.7□□□□□ -1.18
LINC00534-203ENST00000523406 KIR3DL1P43629 444 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 DCAF15Q66K64 600 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 GPAT2Q6NUI2 795 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 GIMAP6Q6P9H5 292 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 EEPD1Q7L9B9 569 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 SLC51AQ86UW1 340 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 CCDC144CPQ8IYA2 1237 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 ST13P5Q8NFI4 369 aaPredicted RBP7.7□□□□□ -1.18
LINC00534-203ENST00000523406 MRFAP1L1Q96HT8 127 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 FAM227BQ96M60 508 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 NYXQ9GZU5 481 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 FAM86C1Q9NVL1 165 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 PAG1Q9NWQ8 432 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 NARFQ9UHQ1 456 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 RIPOR2Q9Y4F9 1068 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 U3KQE9 123 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 MROH5Q6ZUA9 1318 aa7.7□□□□□ -1.18
LINC00534-203ENST00000523406 PRR33A8MZF0 331 aa7.69□□□□□ -1.18
LINC00534-203ENST00000523406 SUSD5O60279 629 aa7.69□□□□□ -1.18
LINC00534-203ENST00000523406 NTSR2O95665 410 aa7.69□□□□□ -1.18
LINC00534-203ENST00000523406 SLC5A1P13866 664 aa7.69□□□□□ -1.18
LINC00534-203ENST00000523406 RFC4P35249 363 aa7.69□□□□□ -1.18
LINC00534-203ENST00000523406 ZNF143P52747 638 aaPredicted RBP7.69□□□□□ -1.18
LINC00534-203ENST00000523406 AUHQ13825 339 aaKnown RBP7.69□□□□□ -1.18
LINC00534-203ENST00000523406 CPSF6Q16630 551 aaKnown RBP eCLIP7.69□□□□□ -1.18
LINC00534-203ENST00000523406 DDX46Q7L014 1031 aaKnown RBP7.69□□□□□ -1.18
LINC00534-203ENST00000523406 KRT27Q7Z3Y8 459 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms