RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 CCDC148Q8NFR7 591 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 RASGRP4Q8TDF6 673 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 TLCD1Q96CP7 247 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 GJD4Q96KN9 370 aaPredicted RBP11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 MRIQ9BWK5 157 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 SCN9AQ15858 1988 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 A0A087WUV0 522 aaPredicted RBP11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 PP2D1A8MPX8 630 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 RPS6KA4O75676 772 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 ALAS1P13196 640 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 KCNA1Q09470 495 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 MAN2A1Q16706 1144 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 TSNAXIP1Q2TAA8 658 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 LRCH2Q5VUJ6 765 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 KCNV1Q6PIU1 500 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 KRT25Q7Z3Z0 450 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 C11orf96Q7Z7L8 435 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 HOMER1Q86YM7 354 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 TUBGCP2Q9BSJ2 902 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 GDAQ9Y2T3 454 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 OAS1P00973 400 aaKnown RBP11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 ALDH1B1P30837 517 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 KRT9P35527 623 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 COPB2P35606 906 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 DRG2P55039 364 aaKnown RBP11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 FAM98CQ17RN3 349 aaKnown RBP11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 B3GNT9Q6UX72 402 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 SPATA4Q8NEY3 305 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 SLCO2A1Q92959 643 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 JADE2Q9NQC1 790 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 USP17L3A6NCW0 530 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 USP17L4A6NCW7 530 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 SH3BP5O60239 455 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 KIF5BP33176 963 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 SLC4A8Q2Y0W8 1093 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 USP17L1Q7RTZ2 530 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 SLC44A5Q8NCS7 719 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 OSBPL9Q96SU4 736 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 ANKRD2Q9GZV1 360 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 EPB41L4BQ9H329 900 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 SUGCTQ9HAC7 445 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 SIX2Q9NPC8 291 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 UBE4BO95155 1302 aa11.49□□□□□ -0.57
ERGIC1-211ENST00000523215 KRT86O43790 486 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 MCM7P33993 719 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 GTF2A1P52655 376 aaPredicted RBP11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 FKBP1AP62942 108 aaKnown RBP11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 CCDC15Q0P6D6 951 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 ICE2Q659A1 982 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 FBXO41Q8TF61 875 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 AGBL1Q96MI9 1066 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 SUDS3Q9H7L9 328 aaPredicted RBP11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 AGPAT5Q9NUQ2 364 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 CAPN6Q9Y6Q1 641 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 CCDC194A0A1B0GVG4 234 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 EPHB6O15197 1021 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 NPHP1O15259 732 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 STK10O94804 968 aaKnown RBP11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 ALADP13716 330 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 CYLC1P35663 651 aaPredicted RBP11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 TRPC1P48995 793 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 IQCEQ6IPM2 695 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 P3H4Q92791 437 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 JAKMIP2Q96AA8 810 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 SEZ6LQ9BYH1 1024 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 CRNKL1Q9BZJ0 848 aaKnown RBP11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 ACBD3Q9H3P7 528 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 KIAA1522Q9P206 1035 aaPredicted RBP11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 TRIM49BA6NDI0 452 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 TIMM44O43615 452 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 DIXDC1Q155Q3 683 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 FOXR1Q6PIV2 292 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 IRF2BP2Q7Z5L9 587 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 PPM1EQ8WY54 764 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 TATDN2Q93075 761 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 METTL14Q9HCE5 456 aaKnown RBP11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 TRIM10Q9UDY6 481 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 PCDHA13Q9Y5I0 950 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 MYH10P35580 1976 aa11.48□□□□□ -0.57
ERGIC1-211ENST00000523215 PEX19P40855 299 aa11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 KARSQ15046 597 aaKnown RBP11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 NCAPH2Q6IBW4 605 aa11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 CCDC84Q86UT8 332 aaPredicted RBP11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 PNMA1Q8ND90 353 aa11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 WHAMMQ8TF30 809 aa11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 GPR101Q96P66 508 aaPredicted RBP11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 EHD4Q9H223 541 aa11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 FAM204AQ9H8W3 233 aa11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 LUC7L2Q9Y383 392 aaKnown RBP11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 ZNF233A6NK53 670 aa11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 NEFHP12036 1026 aa11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 AGBL2Q5U5Z8 902 aa11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 KLHL10Q6JEL2 608 aa11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 AFAP1L1Q8TED9 768 aa11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 RAD54LQ92698 747 aa11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 ISCUQ9H1K1 167 aa11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 SLC24A3Q9HC58 644 aa11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 STIM2Q9P246 746 aa11.47□□□□□ -0.57
ERGIC1-211ENST00000523215 MYH11P35749 1972 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms