RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 SPRED2Q7Z698 418 aa11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 SERINC5Q86VE9 423 aa11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 SGMS1Q86VZ5 419 aa11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 GIMAP8Q8ND71 665 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 GLG1Q92896 1179 aa11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 ZNF215Q9UL58 517 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 FRMPD4Q14CM0 1322 aa11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 ABHD14A-ACY1A0A1B0GW23 586 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 SMCO2A6NFE2 343 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 EPOPA6NHQ4 379 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 LGR5O75473 907 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 UPP2O95045 317 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 CXCL10P02778 98 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 ITGB5P18084 799 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 IGBP1P78318 339 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 MTMR1Q13613 665 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 KRT32Q14532 448 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 WWC2Q6AWC2 1192 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 TRAF7Q6Q0C0 670 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 IL27Q8NEV9 243 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 DBF4BQ8NFT6 615 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 SEPT1Q8WYJ6 367 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 SYMPKQ92797 1274 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 GPRASP2Q96D09 838 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 JAKMIP1Q96N16 626 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 UIMC1Q96RL1 719 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 RAD9AQ99638 391 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 SENP7Q9BQF6 1050 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 TSPYL2Q9H2G4 693 aaPredicted RBP11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 EHMT1Q9H9B1 1298 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 RBM28Q9NW13 759 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 TMEM260Q9NX78 707 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 THEGQ9P2T0 379 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 REV3LO60673 3130 aa11.73□□□□□ -0.53
CTNNA1-235ENST00000522730 GSTTP1A0A1W2PQM5 241 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 PPFIA3O75145 1194 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 PRR29P0C7W0 189 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 ADD1P35611 737 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 ZNF76P36508 570 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 ADCY7P51828 1080 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 RBL2Q08999 1139 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 APOBRQ0VD83 1088 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 TJAP1Q5JTD0 557 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 Q6ZUG5 572 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 MYOCDQ8IZQ8 938 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 CYP2W1Q8TAV3 490 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 SEPT8Q92599 483 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 CDHR1Q96JP9 859 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 OSBPL7Q9BZF2 842 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 JADE2Q9NQC1 790 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 UBIAD1Q9Y5Z9 338 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 GBF1Q92538 1859 aa11.72□□□□□ -0.53
CTNNA1-235ENST00000522730 EMSYQ7Z589 1322 aa11.71□□□□□ -0.53
CTNNA1-235ENST00000522730 EFCAB14O75071 495 aa11.71□□□□□ -0.53
CTNNA1-235ENST00000522730 AMHP03971 560 aa11.71□□□□□ -0.53
CTNNA1-235ENST00000522730 HMGB1P09429 215 aaKnown RBP11.71□□□□□ -0.53
CTNNA1-235ENST00000522730 KCNA2P16389 499 aa11.71□□□□□ -0.53
CTNNA1-235ENST00000522730 CDC27P30260 824 aa11.71□□□□□ -0.53
CTNNA1-235ENST00000522730 MRPS5P82675 430 aaKnown RBP11.71□□□□□ -0.53
CTNNA1-235ENST00000522730 PPFIA1Q13136 1202 aa11.71□□□□□ -0.53
CTNNA1-235ENST00000522730 JAKMIP3Q5VZ66 844 aa11.71□□□□□ -0.53
CTNNA1-235ENST00000522730 TYW1BQ6NUM6 668 aa11.71□□□□□ -0.53
CTNNA1-235ENST00000522730 LMBR1Q8WVP7 490 aa11.71□□□□□ -0.53
CTNNA1-235ENST00000522730 ASB2Q96Q27 587 aa11.71□□□□□ -0.53
CTNNA1-235ENST00000522730 MXRA8Q9BRK3 442 aa11.71□□□□□ -0.53
CTNNA1-235ENST00000522730 RIC8AQ9NPQ8 531 aa11.71□□□□□ -0.53
CTNNA1-235ENST00000522730 MTCH2Q9Y6C9 303 aa11.71□□□□□ -0.53
CTNNA1-235ENST00000522730 CNTNAP5Q8WYK1 1306 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 DDX39AO00148 427 aaKnown RBP11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 STXBP3O00186 592 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 GJB5O95377 273 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 ARP10275 920 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 METAP2P50579 478 aaKnown RBP eCLIP11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 TFF2Q03403 129 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 GRB10Q13322 594 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 TSGA10IPQ3SY00 556 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 PLEKHG4Q58EX7 1191 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 BLOC1S2Q6QNY1 142 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 RUFY4Q6ZNE9 571 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 ATXN2LQ8WWM7 1075 aaKnown RBP11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 BRF1Q92994 677 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 ZBTB10Q96DT7 871 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 SDF4Q9BRK5 362 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 SMARCAD1Q9H4L7 1026 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 AZI2Q9H6S1 392 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 KCNH7Q9NS40 1196 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 FAM217BQ9NTX9 383 aaPredicted RBP11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 ERAP1Q9NZ08 941 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 SNX14Q9Y5W7 946 aa11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 PRRC2BQ5JSZ5 2229 aaKnown RBP11.7□□□□□ -0.54
CTNNA1-235ENST00000522730 NRCAMQ92823 1304 aa11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 BDP1A6H8Y1 2624 aa11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 MAFGO15525 162 aa11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 FOSP01100 380 aaPredicted RBP11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 AKAP17AQ02040 695 aaKnown RBP11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 FUT2Q10981 343 aa11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 GRIK4Q16099 956 aa11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 GDPD5Q8WTR4 605 aa11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 DNAJB3Q8WWF6 145 aa11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 TGS1Q96RS0 853 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms