RNA–Protein interactions for RNA: ENST00000521312.1

UBR5-209, Transcript of ubiquitin protein ligase E3 component n-recognin 5, human

TSL 3

Gene UBR5, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR5-209	ENST00000521312	C19orf47	Q8N9M1	422 aa	Known RBP	5.01	□□□□□ -1.61
UBR5-209	ENST00000521312	NPLOC4	Q8TAT6	608 aa		5.01	□□□□□ -1.61
UBR5-209	ENST00000521312	C12orf65	Q9H3J6	166 aa	Known RBP	5.01	□□□□□ -1.61
UBR5-209	ENST00000521312	ZNF703	Q9H7S9	590 aa	Predicted RBP	5.01	□□□□□ -1.61
UBR5-209	ENST00000521312	ARHGAP20	Q9P2F6	1191 aa		5.01	□□□□□ -1.61
UBR5-209	ENST00000521312	RBPJL	Q9UBG7	517 aa		5.01	□□□□□ -1.61
UBR5-209	ENST00000521312	ZNF888	P0CJ79	500 aa	Predicted RBP	5	□□□□□ -1.61
UBR5-209	ENST00000521312	GLRB	P48167	497 aa		5	□□□□□ -1.61
UBR5-209	ENST00000521312	SKIDA1	Q1XH10	827 aa		5	□□□□□ -1.61
UBR5-209	ENST00000521312	CYP4F22	Q6NT55	531 aa		5	□□□□□ -1.61
UBR5-209	ENST00000521312	ZNF808	Q8N4W9	903 aa	Predicted RBP	5	□□□□□ -1.61
UBR5-209	ENST00000521312	TTLL11	Q8NHH1	800 aa		5	□□□□□ -1.61
UBR5-209	ENST00000521312	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	5	□□□□□ -1.61
UBR5-209	ENST00000521312	PPP1R14A	Q96A00	147 aa		5	□□□□□ -1.61
UBR5-209	ENST00000521312	NKX2-4	Q9H2Z4	354 aa		5	□□□□□ -1.61
UBR5-209	ENST00000521312	MSL2	Q9HCI7	577 aa		5	□□□□□ -1.61
UBR5-209	ENST00000521312	CLDND1	Q9NY35	253 aa		5	□□□□□ -1.61
UBR5-209	ENST00000521312	FOXN1	O15353	648 aa		4.99	□□□□□ -1.61
UBR5-209	ENST00000521312	CUTA	O60888	179 aa		4.99	□□□□□ -1.61
UBR5-209	ENST00000521312	CKM	P06732	381 aa		4.99	□□□□□ -1.61
UBR5-209	ENST00000521312	COL9A2	Q14055	689 aa	Predicted RBP	4.99	□□□□□ -1.61
UBR5-209	ENST00000521312	KIAA1211L	Q6NV74	962 aa		4.99	□□□□□ -1.61
UBR5-209	ENST00000521312	TRIM59	Q8IWR1	403 aa		4.99	□□□□□ -1.61
UBR5-209	ENST00000521312	STPG3	Q8N7X2	389 aa		4.99	□□□□□ -1.61
UBR5-209	ENST00000521312	OR6P1	Q8NGX9	317 aa		4.99	□□□□□ -1.61
UBR5-209	ENST00000521312	KLHL6	Q8WZ60	621 aa		4.99	□□□□□ -1.61
UBR5-209	ENST00000521312	DPYSL5	Q9BPU6	564 aa		4.99	□□□□□ -1.61
UBR5-209	ENST00000521312	PLA2G12B	Q9BX93	195 aa		4.99	□□□□□ -1.61
UBR5-209	ENST00000521312	TLR9	Q9NR96	1032 aa		4.99	□□□□□ -1.61
UBR5-209	ENST00000521312	ASH2L	Q9UBL3	628 aa		4.99	□□□□□ -1.61
UBR5-209	ENST00000521312	APEX2	Q9UBZ4	518 aa		4.99	□□□□□ -1.61
UBR5-209	ENST00000521312	NR2E1	Q9Y466	385 aa		4.99	□□□□□ -1.61
UBR5-209	ENST00000521312		A0A1W2PQH9	124 aa		4.98	□□□□□ -1.61
UBR5-209	ENST00000521312	PEX11B	O96011	259 aa		4.98	□□□□□ -1.61
UBR5-209	ENST00000521312	ENO2	P09104	434 aa	Predicted RBP	4.98	□□□□□ -1.61
UBR5-209	ENST00000521312	EIF6	P56537	245 aa	Known RBP	4.98	□□□□□ -1.61
UBR5-209	ENST00000521312	PROSER1	Q86XN7	944 aa		4.98	□□□□□ -1.61
UBR5-209	ENST00000521312	KCND1	Q9NSA2	647 aa		4.98	□□□□□ -1.61
UBR5-209	ENST00000521312	PTPN22	Q9Y2R2	807 aa		4.98	□□□□□ -1.61
UBR5-209	ENST00000521312	GIT1	Q9Y2X7	761 aa		4.98	□□□□□ -1.61
UBR5-209	ENST00000521312	NUB1	Q9Y5A7	615 aa		4.98	□□□□□ -1.61
UBR5-209	ENST00000521312	PCDHA2	Q9Y5H9	948 aa		4.98	□□□□□ -1.61
UBR5-209	ENST00000521312	CYP27B1	O15528	508 aa		4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	POLD1	P28340	1107 aa		4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	ZNF143	P52747	638 aa	Predicted RBP	4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	FSTL1	Q12841	308 aa		4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	PPP2R5E	Q16537	467 aa		4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	RNF151	Q2KHN1	245 aa		4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	LAIR1	Q6GTX8	287 aa		4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	CCDC81	Q6ZN84	652 aa		4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	SGMS1	Q86VZ5	419 aa		4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	CCDC103	Q8IW40	242 aa		4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	RCBTB1	Q8NDN9	531 aa		4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	SCYL1	Q96KG9	808 aa		4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	SLC2A4RG	Q9NR83	387 aa		4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	PTGFRN	Q9P2B2	879 aa		4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	PUF60	Q9UHX1	559 aa	Known RBP	4.97	□□□□□ -1.61
UBR5-209	ENST00000521312	NUDT3	O95989	172 aa		4.96	□□□□□ -1.62
UBR5-209	ENST00000521312	HOXC12	P31275	282 aa		4.96	□□□□□ -1.62
UBR5-209	ENST00000521312	MSX2	P35548	267 aa	Predicted RBP	4.96	□□□□□ -1.62
UBR5-209	ENST00000521312	LTBR	P36941	435 aa		4.96	□□□□□ -1.62
UBR5-209	ENST00000521312	GRIN1	Q05586	938 aa		4.96	□□□□□ -1.62
UBR5-209	ENST00000521312	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.96	□□□□□ -1.62
UBR5-209	ENST00000521312	VHLL	Q6RSH7	139 aa		4.96	□□□□□ -1.62
UBR5-209	ENST00000521312	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.95	□□□□□ -1.62
UBR5-209	ENST00000521312	RHOBTB3	O94955	611 aa		4.95	□□□□□ -1.62
UBR5-209	ENST00000521312	CP	P00450	1065 aa		4.95	□□□□□ -1.62
UBR5-209	ENST00000521312	SNRPB2	P08579	225 aa	Known RBP	4.95	□□□□□ -1.62
UBR5-209	ENST00000521312	ECI1	P42126	302 aa		4.95	□□□□□ -1.62
UBR5-209	ENST00000521312	RRAD	P55042	308 aa		4.95	□□□□□ -1.62
UBR5-209	ENST00000521312	CRHR2	Q13324	411 aa		4.95	□□□□□ -1.62
UBR5-209	ENST00000521312	ZKSCAN2	Q63HK3	967 aa		4.95	□□□□□ -1.62
UBR5-209	ENST00000521312	DPP8	Q6V1X1	898 aa	Predicted RBP	4.95	□□□□□ -1.62
UBR5-209	ENST00000521312	BCL2L13	Q9BXK5	485 aa		4.95	□□□□□ -1.62
UBR5-209	ENST00000521312	SLC6A20	Q9NP91	592 aa		4.95	□□□□□ -1.62
UBR5-209	ENST00000521312	CEP72	Q9P209	647 aa		4.95	□□□□□ -1.62
UBR5-209	ENST00000521312	FBXL7	Q9UJT9	491 aa		4.95	□□□□□ -1.62
UBR5-209	ENST00000521312	SLC27A2	O14975	620 aa		4.94	□□□□□ -1.62
UBR5-209	ENST00000521312	HMGB1	P09429	215 aa	Known RBP	4.94	□□□□□ -1.62
UBR5-209	ENST00000521312	ADRA1B	P35368	520 aa		4.94	□□□□□ -1.62
UBR5-209	ENST00000521312	PFKP	Q01813	784 aa		4.94	□□□□□ -1.62
UBR5-209	ENST00000521312	FOXL1	Q12952	345 aa		4.94	□□□□□ -1.62
UBR5-209	ENST00000521312	ADGRE4P	Q86SQ3	457 aa		4.94	□□□□□ -1.62
UBR5-209	ENST00000521312	TMPRSS6	Q8IU80	811 aa		4.94	□□□□□ -1.62
UBR5-209	ENST00000521312	PPIL6	Q8IXY8	311 aa		4.94	□□□□□ -1.62
UBR5-209	ENST00000521312	CCDC140	Q96MF4	163 aa		4.94	□□□□□ -1.62
UBR5-209	ENST00000521312	TACO1	Q9BSH4	297 aa	Known RBP	4.94	□□□□□ -1.62
UBR5-209	ENST00000521312	ADARB2	Q9NS39	739 aa	Known RBP	4.94	□□□□□ -1.62
UBR5-209	ENST00000521312	PLA2G3	Q9NZ20	509 aa		4.94	□□□□□ -1.62
UBR5-209	ENST00000521312	ESYT3	A0FGR9	886 aa		4.93	□□□□□ -1.62
UBR5-209	ENST00000521312	MASP2	O00187	686 aa		4.93	□□□□□ -1.62
UBR5-209	ENST00000521312	ARHGAP6	O43182	974 aa		4.93	□□□□□ -1.62
UBR5-209	ENST00000521312	ERBB2	P04626	1255 aa		4.93	□□□□□ -1.62
UBR5-209	ENST00000521312	ITGAV	P06756	1048 aa		4.93	□□□□□ -1.62
UBR5-209	ENST00000521312	FAH	P16930	419 aa		4.93	□□□□□ -1.62
UBR5-209	ENST00000521312	KRT4	P19013	534 aa		4.93	□□□□□ -1.62
UBR5-209	ENST00000521312	GIPR	P48546	466 aa		4.93	□□□□□ -1.62
UBR5-209	ENST00000521312	COL10A1	Q03692	680 aa		4.93	□□□□□ -1.62

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