RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 DHX8Q14562 1220 aaKnown RBP16.89■□□□□ 0.29
SREK1-209ENST00000520953 GNPTABQ3T906 1256 aa16.89■□□□□ 0.29
SREK1-209ENST00000520953 TMEM119Q4V9L6 283 aa16.89■□□□□ 0.29
SREK1-209ENST00000520953 PRAMEF19Q5SWL8 479 aa16.89■□□□□ 0.29
SREK1-209ENST00000520953 CYFIP1Q7L576 1253 aa16.89■□□□□ 0.29
SREK1-209ENST00000520953 BANK1Q8NDB2 785 aa16.89■□□□□ 0.29
SREK1-209ENST00000520953 TIGD1Q96MW7 591 aa16.89■□□□□ 0.29
SREK1-209ENST00000520953 KATNBL1Q9H079 304 aa16.89■□□□□ 0.29
SREK1-209ENST00000520953 BLZF1Q9H2G9 400 aa16.89■□□□□ 0.29
SREK1-209ENST00000520953 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.89■□□□□ 0.29
SREK1-209ENST00000520953 KIAA1024Q9UPX6 916 aa16.89■□□□□ 0.29
SREK1-209ENST00000520953 E9PMD0 336 aa16.88■□□□□ 0.29
SREK1-209ENST00000520953 STAM2O75886 525 aa16.88■□□□□ 0.29
SREK1-209ENST00000520953 ICAM3P32942 547 aa16.88■□□□□ 0.29
SREK1-209ENST00000520953 RBM43Q6ZSC3 357 aaKnown RBP16.88■□□□□ 0.29
SREK1-209ENST00000520953 IQUBQ8NA54 791 aa16.88■□□□□ 0.29
SREK1-209ENST00000520953 SLITRK3O94933 977 aa16.88■□□□□ 0.29
SREK1-209ENST00000520953 ISM2Q6H9L7 571 aa16.88■□□□□ 0.29
SREK1-209ENST00000520953 SH3RF1Q7Z6J0 888 aa16.88■□□□□ 0.29
SREK1-209ENST00000520953 TRIM44Q96DX7 344 aaPredicted RBP16.88■□□□□ 0.29
SREK1-209ENST00000520953 CALML4Q96GE6 196 aa16.88■□□□□ 0.29
SREK1-209ENST00000520953 PDLIM2Q96JY6 352 aa16.88■□□□□ 0.29
SREK1-209ENST00000520953 HSD17B14Q9BPX1 270 aa16.88■□□□□ 0.29
SREK1-209ENST00000520953 TINF2Q9BSI4 451 aa16.88■□□□□ 0.29
SREK1-209ENST00000520953 TBC1D22BQ9NU19 505 aa16.88■□□□□ 0.29
SREK1-209ENST00000520953 CCDC39Q9UFE4 941 aa16.88■□□□□ 0.29
SREK1-209ENST00000520953 ASB14A6NK59 587 aa16.87■□□□□ 0.29
SREK1-209ENST00000520953 MCM6Q14566 821 aa16.87■□□□□ 0.29
SREK1-209ENST00000520953 UGCGQ16739 394 aa16.87■□□□□ 0.29
SREK1-209ENST00000520953 TAPT1Q6NXT6 567 aa16.87■□□□□ 0.29
SREK1-209ENST00000520953 MIER3Q7Z3K6 550 aa16.87■□□□□ 0.29
SREK1-209ENST00000520953 DDX41Q9UJV9 622 aaKnown RBP16.87■□□□□ 0.29
SREK1-209ENST00000520953 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.87■□□□□ 0.29
SREK1-209ENST00000520953 BIN1O00499 593 aa16.87■□□□□ 0.29
SREK1-209ENST00000520953 CYP2C19P33261 490 aa16.87■□□□□ 0.29
SREK1-209ENST00000520953 CUL4BQ13620 913 aa16.87■□□□□ 0.29
SREK1-209ENST00000520953 POSTNQ15063 836 aa16.87■□□□□ 0.29
SREK1-209ENST00000520953 MAMDC4Q6UXC1 1216 aa16.87■□□□□ 0.29
SREK1-209ENST00000520953 TPH2Q8IWU9 490 aa16.87■□□□□ 0.29
SREK1-209ENST00000520953 REM2Q8IYK8 340 aaPredicted RBP16.87■□□□□ 0.29
SREK1-209ENST00000520953 CEP57L1Q8IYX8 460 aa16.87■□□□□ 0.29
SREK1-209ENST00000520953 CDK5RAP3Q96JB5 506 aa16.87■□□□□ 0.29
SREK1-209ENST00000520953 JPH1Q9HDC5 661 aaPredicted RBP16.87■□□□□ 0.29
SREK1-209ENST00000520953 SAMM50Q9Y512 469 aa16.87■□□□□ 0.29
SREK1-209ENST00000520953 MAFGO15525 162 aa16.86■□□□□ 0.29
SREK1-209ENST00000520953 ADCY6O43306 1168 aa16.86■□□□□ 0.29
SREK1-209ENST00000520953 RPA1P27694 616 aa16.86■□□□□ 0.29
SREK1-209ENST00000520953 ADCYAP1R1P41586 468 aa16.86■□□□□ 0.29
SREK1-209ENST00000520953 SP3Q02447 781 aa16.86■□□□□ 0.29
SREK1-209ENST00000520953 PRKCZQ05513 592 aa16.86■□□□□ 0.29
SREK1-209ENST00000520953 HYIQ5T013 277 aa16.86■□□□□ 0.29
SREK1-209ENST00000520953 CCDC62Q6P9F0 684 aa16.86■□□□□ 0.29
SREK1-209ENST00000520953 TRMT1LQ7Z2T5 733 aaKnown RBP16.86■□□□□ 0.29
SREK1-209ENST00000520953 ZNF467Q7Z7K2 595 aaPredicted RBP16.86■□□□□ 0.29
SREK1-209ENST00000520953 CD99L2Q8TCZ2 262 aa16.86■□□□□ 0.29
SREK1-209ENST00000520953 PIGOQ8TEQ8 1089 aa16.86■□□□□ 0.29
SREK1-209ENST00000520953 FUCA2Q9BTY2 467 aa16.86■□□□□ 0.29
SREK1-209ENST00000520953 DIS3Q9Y2L1 958 aaKnown RBP16.86■□□□□ 0.29
SREK1-209ENST00000520953 TMEM150BA6NC51 233 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 FARP2O94887 1054 aaPredicted RBP16.85■□□□□ 0.29
SREK1-209ENST00000520953 GGPS1O95749 300 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 HOXC6P09630 235 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 HSPA6P17066 643 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 FCGRTP55899 365 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 EPHA7Q15375 998 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 CDHR1Q96JP9 859 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 LXNQ9BS40 222 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 SLC9A2Q9UBY0 812 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 PCDHA5Q9Y5H7 936 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 NFASCO94856 1347 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 C1QTNF8P60827 252 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 ACTR2P61160 394 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 ERMNQ8TAM6 284 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 RAD54LQ92698 747 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 MPHOSPH6Q99547 160 aaKnown RBP16.85■□□□□ 0.29
SREK1-209ENST00000520953 SH2D3AQ9BRG2 576 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 POLR3CQ9BUI4 534 aaPredicted RBP16.85■□□□□ 0.29
SREK1-209ENST00000520953 KIAA1468Q9P260 1216 aa16.85■□□□□ 0.29
SREK1-209ENST00000520953 ZHX1Q9UKY1 873 aaPredicted RBP16.85■□□□□ 0.29
SREK1-209ENST00000520953 B4DLN1 442 aa16.84■□□□□ 0.29
SREK1-209ENST00000520953 TXNP10599 105 aaKnown RBP16.84■□□□□ 0.29
SREK1-209ENST00000520953 RGS2P41220 211 aa16.84■□□□□ 0.29
SREK1-209ENST00000520953 FLT3LGP49771 235 aa16.84■□□□□ 0.29
SREK1-209ENST00000520953 HAUS3Q68CZ6 603 aa16.84■□□□□ 0.29
SREK1-209ENST00000520953 LENG1Q96BZ8 264 aaPredicted RBP16.84■□□□□ 0.29
SREK1-209ENST00000520953 CFHR5Q9BXR6 569 aa16.84■□□□□ 0.29
SREK1-209ENST00000520953 KBTBD4Q9NVX7 518 aa16.84■□□□□ 0.29
SREK1-209ENST00000520953 WDR81Q562E7 1941 aa16.84■□□□□ 0.29
SREK1-209ENST00000520953 SSBP05455 408 aaKnown RBP eCLIP16.84■□□□□ 0.29
SREK1-209ENST00000520953 KRT76Q01546 638 aa16.84■□□□□ 0.29
SREK1-209ENST00000520953 LARP4BQ92615 738 aaKnown RBP16.84■□□□□ 0.29
SREK1-209ENST00000520953 APBA2Q99767 749 aa16.84■□□□□ 0.29
SREK1-209ENST00000520953 SENP7Q9BQF6 1050 aa16.84■□□□□ 0.29
SREK1-209ENST00000520953 SYNGAP1Q96PV0 1343 aa16.83■□□□□ 0.29
SREK1-209ENST00000520953 KDM3AQ9Y4C1 1321 aa16.83■□□□□ 0.29
SREK1-209ENST00000520953 NPHP3-ACAD11A0A0J9YXS1 232 aa16.83■□□□□ 0.28
SREK1-209ENST00000520953 ESPNB1AK53 854 aa16.83■□□□□ 0.28
SREK1-209ENST00000520953 WDR64B1ANS9 1081 aa16.83■□□□□ 0.28
SREK1-209ENST00000520953 GPR25O00155 361 aa16.83■□□□□ 0.28
SREK1-209ENST00000520953 CTAGE5O15320 804 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms