RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 CDC27P30260 824 aa23.47■■□□□ 1.35
SNHG6-203ENST00000520944 ADD1P35611 737 aaKnown RBP23.47■■□□□ 1.35
SNHG6-203ENST00000520944 ARHGAP4P98171 946 aa23.47■■□□□ 1.35
SNHG6-203ENST00000520944 APOBRQ0VD83 1088 aa23.47■■□□□ 1.35
SNHG6-203ENST00000520944 CCDC85BQ15834 202 aaPredicted RBP23.47■■□□□ 1.35
SNHG6-203ENST00000520944 GLG1Q92896 1179 aa23.47■■□□□ 1.35
SNHG6-203ENST00000520944 BRF1Q92994 677 aa23.47■■□□□ 1.35
SNHG6-203ENST00000520944 FAM217BQ9NTX9 383 aaPredicted RBP23.47■■□□□ 1.35
SNHG6-203ENST00000520944 NRCAMQ92823 1304 aa23.47■■□□□ 1.35
SNHG6-203ENST00000520944 PSMA5P28066 241 aa23.46■■□□□ 1.35
SNHG6-203ENST00000520944 MYO9BQ13459 2157 aa23.46■■□□□ 1.35
SNHG6-203ENST00000520944 MBTPS1Q14703 1052 aa23.46■■□□□ 1.35
SNHG6-203ENST00000520944 TYW1BQ6NUM6 668 aa23.46■■□□□ 1.35
SNHG6-203ENST00000520944 MXRA8Q9BRK3 442 aa23.46■■□□□ 1.35
SNHG6-203ENST00000520944 TANC1Q9C0D5 1861 aa23.46■■□□□ 1.35
SNHG6-203ENST00000520944 CERS4Q9HA82 394 aa23.46■■□□□ 1.35
SNHG6-203ENST00000520944 ERAP1Q9NZ08 941 aa23.46■■□□□ 1.35
SNHG6-203ENST00000520944 GSTTP1A0A1W2PQM5 241 aa23.45■■□□□ 1.34
SNHG6-203ENST00000520944 DEFB103AP81534 67 aa23.45■■□□□ 1.34
SNHG6-203ENST00000520944 TAP1Q03518 808 aa23.45■■□□□ 1.34
SNHG6-203ENST00000520944 SMARCAD1Q9H4L7 1026 aa23.45■■□□□ 1.34
SNHG6-203ENST00000520944 KCNH7Q9NS40 1196 aa23.45■■□□□ 1.34
SNHG6-203ENST00000520944 TET1Q8NFU7 2136 aa23.44■■□□□ 1.34
SNHG6-203ENST00000520944 GTPBP6O43824 516 aaPredicted RBP23.44■■□□□ 1.34
SNHG6-203ENST00000520944 CTSHP09668 335 aa23.44■■□□□ 1.34
SNHG6-203ENST00000520944 ZNF76P36508 570 aa23.44■■□□□ 1.34
SNHG6-203ENST00000520944 AP3B2Q13367 1082 aa23.44■■□□□ 1.34
SNHG6-203ENST00000520944 TCTN1Q2MV58 587 aa23.44■■□□□ 1.34
SNHG6-203ENST00000520944 TMCO2Q7Z6W1 182 aaPredicted RBP23.44■■□□□ 1.34
SNHG6-203ENST00000520944 DBF4BQ8NFT6 615 aa23.44■■□□□ 1.34
SNHG6-203ENST00000520944 LMBR1Q8WVP7 490 aa23.44■■□□□ 1.34
SNHG6-203ENST00000520944 ARNTL2Q8WYA1 636 aa23.44■■□□□ 1.34
SNHG6-203ENST00000520944 PGBD1Q96JS3 809 aa23.44■■□□□ 1.34
SNHG6-203ENST00000520944 RAD9AQ99638 391 aa23.44■■□□□ 1.34
SNHG6-203ENST00000520944 SDF4Q9BRK5 362 aa23.44■■□□□ 1.34
SNHG6-203ENST00000520944 ANO3Q9BYT9 981 aa23.44■■□□□ 1.34
SNHG6-203ENST00000520944 JPH1Q9HDC5 661 aaPredicted RBP23.44■■□□□ 1.34
SNHG6-203ENST00000520944 RPS6KB1P23443 525 aa23.43■■□□□ 1.34
SNHG6-203ENST00000520944 MARK3P27448 753 aa23.43■■□□□ 1.34
SNHG6-203ENST00000520944 AKAP17AQ02040 695 aaKnown RBP23.43■■□□□ 1.34
SNHG6-203ENST00000520944 PPFIA1Q13136 1202 aa23.43■■□□□ 1.34
SNHG6-203ENST00000520944 PFKFB3Q16875 520 aaPredicted RBP23.43■■□□□ 1.34
SNHG6-203ENST00000520944 CEP55Q53EZ4 464 aa23.43■■□□□ 1.34
SNHG6-203ENST00000520944 MICALL1Q8N3F8 863 aa23.43■■□□□ 1.34
SNHG6-203ENST00000520944 CCDC12Q8WUD4 166 aaPredicted RBP23.43■■□□□ 1.34
SNHG6-203ENST00000520944 SEPT8Q92599 483 aa23.43■■□□□ 1.34
SNHG6-203ENST00000520944 SYMPKQ92797 1274 aaKnown RBP23.43■■□□□ 1.34
SNHG6-203ENST00000520944 TSPYL2Q9H2G4 693 aaPredicted RBP23.43■■□□□ 1.34
SNHG6-203ENST00000520944 AZI2Q9H6S1 392 aa23.43■■□□□ 1.34
SNHG6-203ENST00000520944 SLC9A2Q9UBY0 812 aa23.43■■□□□ 1.34
SNHG6-203ENST00000520944 RFXAPO00287 272 aa23.42■■□□□ 1.34
SNHG6-203ENST00000520944 GJB5O95377 273 aa23.42■■□□□ 1.34
SNHG6-203ENST00000520944 AMHP03971 560 aa23.42■■□□□ 1.34
SNHG6-203ENST00000520944 SCG2P13521 617 aa23.42■■□□□ 1.34
SNHG6-203ENST00000520944 ADAM17P78536 824 aa23.42■■□□□ 1.34
SNHG6-203ENST00000520944 PLEKHG4Q58EX7 1191 aa23.42■■□□□ 1.34
SNHG6-203ENST00000520944 FBXL16Q8N461 479 aa23.42■■□□□ 1.34
SNHG6-203ENST00000520944 CYP2W1Q8TAV3 490 aa23.42■■□□□ 1.34
SNHG6-203ENST00000520944 TNPO1Q92973 898 aaKnown RBP23.42■■□□□ 1.34
SNHG6-203ENST00000520944 TMEM260Q9NX78 707 aa23.42■■□□□ 1.34
SNHG6-203ENST00000520944 SREBF1P36956 1147 aa23.41■■□□□ 1.34
SNHG6-203ENST00000520944 FAM117BQ6P1L5 589 aa23.41■■□□□ 1.34
SNHG6-203ENST00000520944 TAF2Q6P1X5 1199 aa23.41■■□□□ 1.34
SNHG6-203ENST00000520944 RSPH3Q86UC2 560 aa23.41■■□□□ 1.34
SNHG6-203ENST00000520944 C6orf50Q9HD87 102 aa23.41■■□□□ 1.34
SNHG6-203ENST00000520944 PRDM6Q9NQX0 595 aa23.41■■□□□ 1.34
SNHG6-203ENST00000520944 TRANK1O15050 2925 aa23.4■■□□□ 1.34
SNHG6-203ENST00000520944 NFASCO94856 1347 aa23.4■■□□□ 1.34
SNHG6-203ENST00000520944 ARP10275 920 aa23.4■■□□□ 1.34
SNHG6-203ENST00000520944 CLK2P49760 499 aaKnown RBP23.4■■□□□ 1.34
SNHG6-203ENST00000520944 GRIK4Q16099 956 aa23.4■■□□□ 1.34
SNHG6-203ENST00000520944 TJAP1Q5JTD0 557 aa23.4■■□□□ 1.34
SNHG6-203ENST00000520944 JAKMIP3Q5VZ66 844 aa23.4■■□□□ 1.34
SNHG6-203ENST00000520944 MCTP2Q6DN12 878 aa23.4■■□□□ 1.34
SNHG6-203ENST00000520944 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.4■■□□□ 1.344e-7■■□□□ 12.9
SNHG6-203ENST00000520944 MYOCDQ8IZQ8 938 aa23.4■■□□□ 1.34
SNHG6-203ENST00000520944 ATXN2LQ8WWM7 1075 aaKnown RBP23.4■■□□□ 1.34
SNHG6-203ENST00000520944 THEGQ9P2T0 379 aa23.4■■□□□ 1.34
SNHG6-203ENST00000520944 GBF1Q92538 1859 aa23.4■■□□□ 1.34
SNHG6-203ENST00000520944 LCHNA4D1U4 455 aa23.39■■□□□ 1.33
SNHG6-203ENST00000520944 MEIS1O00470 390 aa23.39■■□□□ 1.33
SNHG6-203ENST00000520944 PRPF3O43395 683 aaKnown RBP23.39■■□□□ 1.33
SNHG6-203ENST00000520944 EPB41L2O43491 1005 aaKnown RBP23.39■■□□□ 1.33
SNHG6-203ENST00000520944 ARHGEF15O94989 841 aa23.39■■□□□ 1.33
SNHG6-203ENST00000520944 POU3F3P20264 500 aaPredicted RBP23.39■■□□□ 1.33
SNHG6-203ENST00000520944 FAM26DQ5JW98 314 aa23.39■■□□□ 1.33
SNHG6-203ENST00000520944 AGO4Q9HCK5 861 aaKnown RBP23.39■■□□□ 1.33
SNHG6-203ENST00000520944 TUBE1Q9UJT0 475 aa23.39■■□□□ 1.33
SNHG6-203ENST00000520944 INSL6Q9Y581 213 aa23.39■■□□□ 1.33
SNHG6-203ENST00000520944 RRN3P2A6NIE6 340 aa23.38■■□□□ 1.33
SNHG6-203ENST00000520944 GNA11P29992 359 aa23.38■■□□□ 1.33
SNHG6-203ENST00000520944 ACTR2P61160 394 aa23.38■■□□□ 1.33
SNHG6-203ENST00000520944 IGBP1P78318 339 aa23.38■■□□□ 1.33
SNHG6-203ENST00000520944 NIPA1Q7RTP0 329 aa23.38■■□□□ 1.33
SNHG6-203ENST00000520944 RPAINQ86UA6 219 aa23.38■■□□□ 1.33
SNHG6-203ENST00000520944 APBB2Q92870 758 aa23.38■■□□□ 1.33
SNHG6-203ENST00000520944 AGXT2Q9BYV1 514 aa23.38■■□□□ 1.33
SNHG6-203ENST00000520944 ZMYND12Q9H0C1 365 aa23.38■■□□□ 1.33
SNHG6-203ENST00000520944 MTCH2Q9Y6C9 303 aa23.38■■□□□ 1.33
SNHG6-203ENST00000520944 SPTBN5Q9NRC6 3674 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms