RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 Q7L0L9 218 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 APTXQ7Z2E3 356 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 MAPKAPK5Q8IW41 473 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 CCDC82Q8N4S0 544 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 PROCA1Q8NCQ7 364 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 FAM71BQ8TC56 605 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 TNFRSF25Q93038 417 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 NSUN4Q96CB9 384 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 LZTS2Q9BRK4 669 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 RIOK1Q9BRS2 568 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 PAGR1Q9BTK6 254 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 PRO3102Q9H379 93 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 KAT14Q9H8E8 782 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 VIPAS39Q9H9C1 493 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 HMX1Q9NP08 348 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 SAP30BPQ9UHR5 308 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 V9GY48 417 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 LOC285556D6RIA3 1793 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 DDX60LQ5H9U9 1706 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 CCDC194A0A1B0GVG4 234 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 LRRC10BA6NIK2 292 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 KRT86O43790 486 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 SEC31AO94979 1220 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 PLEKHA8P1O95397 391 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 FGFR1OPO95684 399 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 CAP2P40123 477 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 CCT6AP40227 531 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 PRPHP41219 470 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 GCLCP48506 637 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 DNM2P50570 870 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 STX17P56962 302 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 MAP3K10Q02779 954 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 TROAPQ12815 778 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 ZNF174Q15697 407 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 SBK1Q52WX2 424 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 WDR78Q5VTH9 848 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 PDXDC2PQ6P474 469 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 DTHD1Q6ZMT9 781 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 BLIDQ8IZY5 108 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 SLC35F6Q8N357 371 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 DAGLBQ8NCG7 672 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 OR8K1Q8NGG5 319 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 TGFBRAP1Q8WUH2 860 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 TRIB2Q92519 343 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 FAM163AQ96GL9 167 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 EPSTI1Q96J88 318 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 AK8Q96MA6 479 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 FUT8Q9BYC5 575 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 C11orf49Q9H6J7 331 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 AS3MTQ9HBK9 375 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 ZNF287Q9HBT7 754 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 TMOD4Q9NZQ9 345 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 MYO6Q9UM54 1294 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 PCDHA4Q9UN74 947 aa9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 LUC7L2Q9Y383 392 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-223ENST00000520520 RPTORQ8N122 1335 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 ANO9A1A5B4 782 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 TARSL2A2RTX5 802 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 TSPY2A6NKD2 308 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 MAP2K7O14733 419 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 TEX33O43247 280 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 TBC1D12O60347 775 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 KRT9P35527 623 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 MAGEA10P43363 369 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 AMPD3Q01432 767 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 UBXN1Q04323 297 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 DSG2Q14126 1118 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 FKBP15Q5T1M5 1219 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 WDR93Q6P2C0 686 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 PIK3AP1Q6ZUJ8 805 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 KIAA1328Q86T90 577 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 CCDC170Q8IYT3 715 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 DEFB123Q8N688 67 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 SDR42E1Q8WUS8 393 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 CPLX3Q8WVH0 158 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 DHTKD1Q96HY7 919 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 P2RX7Q99572 595 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 INCENPQ9NQS7 918 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 DISC1Q9NRI5 854 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 TAB2Q9NYJ8 693 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 NAV1Q8NEY1 1877 aa9.59□□□□□ -0.87
CTNNA1-223ENST00000520520 A0A087X0B3 334 aa9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 FANCGO15287 622 aa9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 PRDM1O75626 825 aa9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 NDUFA10O95299 355 aa9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 MCM7P33993 719 aa9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 UBA7P41226 1012 aa9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 JAG1P78504 1218 aa9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 FOXK1P85037 733 aa9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 SLC20A2Q08357 652 aa9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 MTF1Q14872 753 aa9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 USP49Q70CQ1 688 aa9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 KRT25Q7Z3Z0 450 aa9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 DGKHQ86XP1 1220 aa9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 CMTR1Q8N1G2 835 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 MED15Q96RN5 788 aa9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 DNAJC7Q99615 494 aa9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 NUDT12Q9BQG2 462 aa9.58□□□□□ -0.88
CTNNA1-223ENST00000520520 UBE2OQ9C0C9 1292 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms