RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 CHST13Q8NET6 341 aa6.68□□□□□ -1.34
SKP1-207ENST00000520417 PTPRN2Q92932 1015 aa6.68□□□□□ -1.34
SKP1-207ENST00000520417 NBPF4Q96M43 638 aa6.68□□□□□ -1.34
SKP1-207ENST00000520417 YTHDC1Q96MU7 727 aaKnown RBP6.68□□□□□ -1.34
SKP1-207ENST00000520417 BARX1Q9HBU1 254 aaPredicted RBP6.68□□□□□ -1.34
SKP1-207ENST00000520417 SMPD4Q9NXE4 827 aa6.68□□□□□ -1.34
SKP1-207ENST00000520417 ARHGAP20Q9P2F6 1191 aa6.68□□□□□ -1.34
SKP1-207ENST00000520417 TELO2Q9Y4R8 837 aa6.68□□□□□ -1.34
SKP1-207ENST00000520417 C9orf118A6NHY6 69 aa6.67□□□□□ -1.34
SKP1-207ENST00000520417 B4GALT4O60513 344 aa6.67□□□□□ -1.34
SKP1-207ENST00000520417 ITGB3P05106 788 aa6.67□□□□□ -1.34
SKP1-207ENST00000520417 ENO2P09104 434 aaPredicted RBP6.67□□□□□ -1.34
SKP1-207ENST00000520417 PFKPQ01813 784 aa6.67□□□□□ -1.34
SKP1-207ENST00000520417 EFEMP1Q12805 493 aa6.67□□□□□ -1.34
SKP1-207ENST00000520417 DBX2Q6ZNG2 339 aa6.67□□□□□ -1.34
SKP1-207ENST00000520417 MAMDC2Q7Z304 686 aaPredicted RBP6.67□□□□□ -1.34
SKP1-207ENST00000520417 LIMS2Q7Z4I7 341 aa6.67□□□□□ -1.34
SKP1-207ENST00000520417 PLEKHH3Q7Z736 793 aa6.67□□□□□ -1.34
SKP1-207ENST00000520417 PROSER1Q86XN7 944 aa6.67□□□□□ -1.34
SKP1-207ENST00000520417 STPG3Q8N7X2 389 aa6.67□□□□□ -1.34
SKP1-207ENST00000520417 DEPDC7Q96QD5 511 aa6.67□□□□□ -1.34
SKP1-207ENST00000520417 SRPK1Q96SB4 655 aaKnown RBP6.67□□□□□ -1.34
SKP1-207ENST00000520417 RIC8BQ9NVN3 520 aa6.67□□□□□ -1.34
SKP1-207ENST00000520417 ZFP69BQ9UJL9 534 aa6.67□□□□□ -1.34
SKP1-207ENST00000520417 PCDHA9Q9Y5H5 950 aa6.67□□□□□ -1.34
SKP1-207ENST00000520417 LAMTOR5O43504 91 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 B4GALT3O60512 393 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 APPP05067 770 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 PYGMP11217 842 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 INSRRP14616 1297 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 DNM2P50570 870 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 NFKB2Q00653 900 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 BTBD8Q5XKL5 378 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 CD276Q5ZPR3 534 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 ARHGAP36Q6ZRI8 547 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 ZC3H7AQ8IWR0 971 aaKnown RBP6.66□□□□□ -1.34
SKP1-207ENST00000520417 KBTBD2Q8IY47 623 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 DTX3Q8N9I9 347 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 NUDT10Q8NFP7 164 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 FBXW5Q969U6 566 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 NUDT11Q96G61 164 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 EXOC2Q96KP1 924 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 C8orf37Q96NL8 207 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 DHRS4Q9BTZ2 278 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 SLC39A2Q9NP94 309 aa6.66□□□□□ -1.34
SKP1-207ENST00000520417 FAM221BA6H8Z2 402 aa6.65□□□□□ -1.34
SKP1-207ENST00000520417 NPEPPSL1A6NEC2 478 aa6.65□□□□□ -1.34
SKP1-207ENST00000520417 KCNK3O14649 394 aa6.65□□□□□ -1.34
SKP1-207ENST00000520417 MAGEA10P43363 369 aaPredicted RBP6.65□□□□□ -1.34
SKP1-207ENST00000520417 NFATC3Q12968 1075 aa6.65□□□□□ -1.34
SKP1-207ENST00000520417 SURF1Q15526 300 aa6.65□□□□□ -1.34
SKP1-207ENST00000520417 SMAD2Q15796 467 aaKnown RBP6.65□□□□□ -1.34
SKP1-207ENST00000520417 LCE5AQ5TCM9 118 aa6.65□□□□□ -1.34
SKP1-207ENST00000520417 ARHGEF18Q6ZSZ5 1173 aa6.65□□□□□ -1.34
SKP1-207ENST00000520417 OSTM1Q86WC4 334 aa6.65□□□□□ -1.34
SKP1-207ENST00000520417 PTRH1Q86Y79 214 aaKnown RBP6.65□□□□□ -1.34
SKP1-207ENST00000520417 C8orf49Q96NF6 230 aa6.65□□□□□ -1.34
SKP1-207ENST00000520417 TACO1Q9BSH4 297 aaKnown RBP6.65□□□□□ -1.34
SKP1-207ENST00000520417 KRTAP9-3Q9BYQ3 159 aa6.65□□□□□ -1.34
SKP1-207ENST00000520417 NDOR1Q9UHB4 597 aa6.65□□□□□ -1.34
SKP1-207ENST00000520417 TCRBV5S4A2TA0A5A2 114 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 ACOT7O00154 380 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 PDE6AP16499 860 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 GABREP78334 506 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 PUM1Q14671 1186 aaKnown RBP eCLIP6.64□□□□□ -1.351e-10■■□□□ 11.7
SKP1-207ENST00000520417 GPR19Q15760 415 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 CRY1Q16526 586 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 HABP4Q5JVS0 413 aaKnown RBP6.64□□□□□ -1.35
SKP1-207ENST00000520417 GGNQ86UU5 652 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 NLGN4XQ8N0W4 816 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 KLHL36Q8N4N3 616 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 IGDCC4Q8TDY8 1250 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 SH3RF2Q8TEC5 729 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 BORCS6Q96GS4 357 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 RBM15Q96T37 977 aaKnown RBP eCLIP6.64□□□□□ -1.35
SKP1-207ENST00000520417 DNAJC7Q99615 494 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 SNTG2Q9NY99 539 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 HSPBP1Q9NZL4 362 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 ARHGAP28Q9P2N2 729 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 ST6GALNAC2Q9UJ37 374 aa6.64□□□□□ -1.35
SKP1-207ENST00000520417 CNOT11Q9UKZ1 510 aaKnown RBP6.64□□□□□ -1.35
SKP1-207ENST00000520417 MRPS23Q9Y3D9 190 aaKnown RBP6.64□□□□□ -1.35
SKP1-207ENST00000520417 GSTA4O15217 222 aa6.63□□□□□ -1.35
SKP1-207ENST00000520417 CRTAMO95727 393 aa6.63□□□□□ -1.35
SKP1-207ENST00000520417 C6orf222P0C671 652 aaPredicted RBP6.63□□□□□ -1.35
SKP1-207ENST00000520417 PTPN1P18031 435 aaKnown RBP6.63□□□□□ -1.35
SKP1-207ENST00000520417 NAT1P18440 290 aa6.63□□□□□ -1.35
SKP1-207ENST00000520417 EPHA5P54756 1037 aa6.63□□□□□ -1.35
SKP1-207ENST00000520417 RASA3Q14644 834 aa6.63□□□□□ -1.35
SKP1-207ENST00000520417 ZXDCQ2QGD7 858 aaPredicted RBP6.63□□□□□ -1.35
SKP1-207ENST00000520417 FAM47CQ5HY64 1035 aa6.63□□□□□ -1.35
SKP1-207ENST00000520417 GPR155Q7Z3F1 870 aa6.63□□□□□ -1.35
SKP1-207ENST00000520417 PCDH19Q8TAB3 1148 aa6.63□□□□□ -1.35
SKP1-207ENST00000520417 CBLCQ9ULV8 474 aa6.63□□□□□ -1.35
SKP1-207ENST00000520417 ATP23Q9Y6H3 246 aa6.63□□□□□ -1.35
SKP1-207ENST00000520417 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.62□□□□□ -1.35
SKP1-207ENST00000520417 CCDC66A2RUB6 948 aa6.62□□□□□ -1.35
SKP1-207ENST00000520417 PRAMEF25A6NGN4 478 aa6.62□□□□□ -1.35
SKP1-207ENST00000520417 ZNF839A8K0R7 811 aa6.62□□□□□ -1.35
SKP1-207ENST00000520417 JAM2P57087 298 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms