RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 PYGMP11217 842 aa4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 KCNA6P17658 529 aa4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 SDSP20132 328 aa4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 LACTBP83111 547 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 SRSF3P84103 164 aaKnown RBP4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 TARBP2Q15633 366 aaKnown RBP4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 C21orf62-AS1Q17RA5 79 aa4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 MILR1Q7Z6M3 343 aa4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 LRRTM3Q86VH5 581 aa4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 DHX37Q8IY37 1157 aaKnown RBP4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 NLGN4XQ8N0W4 816 aa4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 DDX1Q92499 740 aaKnown RBP4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 RNF38Q9H0F5 515 aa4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 NGRNQ9NPE2 291 aaKnown RBP4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 LUC7LQ9NQ29 371 aaKnown RBP4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 MYOTQ9UBF9 498 aa4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 DSEQ9UL01 958 aa4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 SIT1Q9Y3P8 196 aa4.73□□□□□ -1.65
HMGB1P41-201ENST00000520234 K7ESM1 405 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 IRS4O14654 1257 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 COL6A2P12110 1019 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 DNM2P50570 870 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 ARHGAP44Q17R89 818 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 CFAP100Q494V2 611 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 EP400NLQ6ZTU2 488 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 KIF18BQ86Y91 864 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 PPM1KQ8N3J5 372 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 IGSF22Q8N9C0 903 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 TTLL11Q8NHH1 800 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 CPA5Q8WXQ8 436 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 ALG3Q92685 438 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 SIGLEC10Q96LC7 697 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 ORAI3Q9BRQ5 295 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 RXFP1Q9HBX9 757 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 SAMD15Q9P1V8 674 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 ASH2LQ9UBL3 628 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 CBLCQ9ULV8 474 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 MAPRE3Q9UPY8 281 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 IRAK3Q9Y616 596 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 IRS2Q9Y4H2 1338 aa4.72□□□□□ -1.65
HMGB1P41-201ENST00000520234 TCRBV5S2A0A599 114 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 ZNF561-AS1K7EIQ3 104 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 NKRFO15226 690 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 JMJD7P0C870 316 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 NCAM1P13591 858 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 PDE6AP16499 860 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 PFKLP17858 780 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 FBLN1P23142 703 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 EPHA5P54756 1037 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 ZNF200P98182 395 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 TMEM177Q53S58 311 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 CDCA2Q69YH5 1023 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 ABHD17CQ6PCB6 329 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 ARHGAP36Q6ZRI8 547 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 OVCH1Q7RTY7 1134 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 OSTM1Q86WC4 334 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 LDHDQ86WU2 507 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 MIB1Q86YT6 1006 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 FAM126BQ8IXS8 530 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 SYT8Q8NBV8 401 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 WNK4Q96J92 1243 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 MRIQ9BWK5 157 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 SGPP1Q9BX95 441 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 CNTD2Q9H8S5 307 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 PCDH18Q9HCL0 1135 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 CABP5Q9NP86 173 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 MBD1Q9UIS9 605 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 SRPK3Q9UPE1 567 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 COQ6Q9Y2Z9 468 aa4.71□□□□□ -1.66
HMGB1P41-201ENST00000520234 SBNO2Q9Y2G9 1366 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 A0A087X0B3 334 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 LOC105371045A0A1W2PR82 267 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 N4BP3O15049 544 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 AMY2AP04746 511 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 ASGR2P07307 311 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 MYCLP1P12525 358 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 AMY2BP19961 511 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 GJA4P35212 333 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 MASP1P48740 699 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 NEK4P51957 841 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 CACNB2Q08289 660 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 ZNF460Q14592 562 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 FIGNQ5HY92 759 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 CRB2Q5IJ48 1285 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 RNF187Q5TA31 235 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 PIK3R6Q5UE93 754 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 CNNM4Q6P4Q7 775 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 ETV3LQ6ZN32 361 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 KCTD1Q719H9 257 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 ZC3H18Q86VM9 953 aaKnown RBP4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 C2orf69Q8N8R5 385 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 MZB1Q8WU39 189 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 YIPF4Q9BSR8 244 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 HSPBP1Q9NZL4 362 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 PCDHA5Q9Y5H7 936 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 HCFC2Q9Y5Z7 792 aa4.7□□□□□ -1.66
HMGB1P41-201ENST00000520234 TCRBV5S4A2TA0A5A2 114 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 SLC12A8A0AV02 714 aa4.69□□□□□ -1.66
HMGB1P41-201ENST00000520234 GSG1L2A8MUP6 293 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms