RNA–Protein interactions for RNA: ENST00000518815.1

MTCL1-207, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best) BASIC

Gene MTCL1, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-207ENST00000518815 NYAP2Q9P242 653 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.07□□□□□ -0.64
MTCL1-207ENST00000518815 CALUO43852 315 aaPredicted RBP11.07□□□□□ -0.64
MTCL1-207ENST00000518815 TDP2O95551 362 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 GH2P01242 217 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 CETN2P41208 172 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 GRB10Q13322 594 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 MOXD1Q6UVY6 613 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 TMEM179Q6ZVK1 233 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 KCTD17Q8N5Z5 321 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 MTMR9Q96QG7 549 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 JMJD4Q9H9V9 463 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 NLRC4Q9NPP4 1024 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 MEA1Q16626 185 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 RNF187Q5TA31 235 aaPredicted RBP11.07□□□□□ -0.64
MTCL1-207ENST00000518815 MSANTD4Q8NCY6 345 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 NOX5Q96PH1 765 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 MXD3Q9BW11 206 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 MRIQ9BWK5 157 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 PLEKHA4Q9H4M7 779 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 PCDHB13Q9Y5F0 798 aa11.07□□□□□ -0.64
MTCL1-207ENST00000518815 SNHG28P0DPA3 235 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 NEFHP12036 1026 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 IRX3P78415 501 aaPredicted RBP11.06□□□□□ -0.64
MTCL1-207ENST00000518815 SFMBT2Q5VUG0 894 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 RRAGAQ7L523 313 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 CHP1Q99653 195 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 DUSP9Q99956 384 aaKnown RBP11.06□□□□□ -0.64
MTCL1-207ENST00000518815 IRX2Q9BZI1 471 aaPredicted RBP11.06□□□□□ -0.64
MTCL1-207ENST00000518815 ZNF277Q9NRM2 450 aaPredicted RBP11.06□□□□□ -0.64
MTCL1-207ENST00000518815 FRMD4BQ9Y2L6 1034 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 JRKLQ9Y4A0 524 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 FHOD1Q9Y613 1164 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 SNED1Q8TER0 1413 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 MYMKA6NI61 221 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 TBX3O15119 743 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 ZRANB2O95218 330 aaKnown RBP eCLIP11.06□□□□□ -0.64
MTCL1-207ENST00000518815 FCER1AP12319 257 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 BMP3P12645 472 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 NOVP48745 357 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 PSMD1Q99460 953 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 ANO3Q9BYT9 981 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 CCPG1Q9ULG6 757 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 KIAA1024Q9UPX6 916 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 GCOM1H8Y6P7 765 aaPredicted RBP11.06□□□□□ -0.64
MTCL1-207ENST00000518815 ECE2O60344 883 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 POLR2MP0CAP2 368 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 EPB41P11171 864 aaKnown RBP11.06□□□□□ -0.64
MTCL1-207ENST00000518815 CACNB1Q02641 598 aaPredicted RBP11.06□□□□□ -0.64
MTCL1-207ENST00000518815 GABPAQ06546 454 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 GPR162Q16538 588 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 DPH6Q7L8W6 267 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 USP37Q86T82 979 aa11.06□□□□□ -0.64
MTCL1-207ENST00000518815 BAZ2BQ9UIF8 2168 aaKnown RBP11.06□□□□□ -0.64
MTCL1-207ENST00000518815 NAV1Q8NEY1 1877 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 POTEMA6NI47 508 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 CCDC172P0C7W6 258 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 PLA2G4BP0C869 781 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 IRX5P78411 483 aaPredicted RBP11.05□□□□□ -0.64
MTCL1-207ENST00000518815 CDC37Q16543 378 aaPredicted RBP11.05□□□□□ -0.64
MTCL1-207ENST00000518815 CDC42EP5Q6NZY7 148 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 CLEC10AQ8IUN9 316 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 RUBCNQ92622 972 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 HYOU1Q9Y4L1 999 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 COASYQ13057 564 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 TTC31Q49AM3 519 aaPredicted RBP11.05□□□□□ -0.64
MTCL1-207ENST00000518815 TMEM119Q4V9L6 283 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 IRF2BP1Q8IU81 584 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 UPF1Q92900 1129 aaKnown RBP eCLIP11.05□□□□□ -0.64
MTCL1-207ENST00000518815 METTL14Q9HCE5 456 aaKnown RBP11.05□□□□□ -0.64
MTCL1-207ENST00000518815 MED4Q9NPJ6 270 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 RNF14Q9UBS8 474 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 TMEM110-MUSTN1A8MSY1 372 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 USP17L10C9JJH3 530 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 EXOC3O60645 756 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 ATP2C2O75185 946 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 HOXA13P31271 388 aaPredicted RBP11.05□□□□□ -0.64
MTCL1-207ENST00000518815 PMS1P54277 932 aaKnown RBP11.05□□□□□ -0.64
MTCL1-207ENST00000518815 PABPC4Q13310 644 aaKnown RBP eCLIP11.05□□□□□ -0.64
MTCL1-207ENST00000518815 BIRC3Q13489 604 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 STRIP1Q5VSL9 837 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 LRRN4CLQ8ND94 238 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 FAM20AQ96MK3 541 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 MRPL11Q9Y3B7 192 aaKnown RBP11.05□□□□□ -0.64
MTCL1-207ENST00000518815 CD2APQ9Y5K6 639 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 CSADQ9Y600 493 aa11.05□□□□□ -0.64
MTCL1-207ENST00000518815 SHTN1A0MZ66 631 aa11.04□□□□□ -0.64
MTCL1-207ENST00000518815 TARSL2A2RTX5 802 aaKnown RBP11.04□□□□□ -0.64
MTCL1-207ENST00000518815 CCDC113Q9H0I3 377 aa11.04□□□□□ -0.64
MTCL1-207ENST00000518815 PDE11AQ9HCR9 933 aa11.04□□□□□ -0.64
MTCL1-207ENST00000518815 CEP72Q9P209 647 aa11.04□□□□□ -0.64
MTCL1-207ENST00000518815 RAB21Q9UL25 225 aa11.04□□□□□ -0.64
MTCL1-207ENST00000518815 PITPNM2Q9BZ72 1349 aa11.04□□□□□ -0.64
MTCL1-207ENST00000518815 IGKV6D-41A0A0C4DH26 115 aa11.04□□□□□ -0.64
MTCL1-207ENST00000518815 GSTTP1A0A1W2PQM5 241 aa11.04□□□□□ -0.64
MTCL1-207ENST00000518815 SSU72P8A0A1W2PR75 194 aa11.04□□□□□ -0.64
MTCL1-207ENST00000518815 ARHGAP25P42331 645 aa11.04□□□□□ -0.64
MTCL1-207ENST00000518815 KIF11P52732 1056 aa11.04□□□□□ -0.64
MTCL1-207ENST00000518815 RNASE9P60153 205 aaKnown RBP11.04□□□□□ -0.64
MTCL1-207ENST00000518815 ASIC2Q16515 512 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms