RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 MRFAP1L1Q96HT8 127 aa7.9□□□□□ -1.14
SCARNA1-201ENST00000517138 NCOA5Q9HCD5 579 aaKnown RBP7.9□□□□□ -1.14
SCARNA1-201ENST00000517138 SFMBT1Q9UHJ3 866 aa7.9□□□□□ -1.14
SCARNA1-201ENST00000517138 COQ6Q9Y2Z9 468 aa7.9□□□□□ -1.14
SCARNA1-201ENST00000517138 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.89□□□□□ -1.15
SCARNA1-201ENST00000517138 CCDC66A2RUB6 948 aa7.89□□□□□ -1.15
SCARNA1-201ENST00000517138 FAM90A27PA6NNH2 459 aa7.89□□□□□ -1.15
SCARNA1-201ENST00000517138 KCNA6P17658 529 aa7.89□□□□□ -1.15
SCARNA1-201ENST00000517138 MLLT6P55198 1093 aaPredicted RBP7.89□□□□□ -1.15
SCARNA1-201ENST00000517138 TTLL7Q6ZT98 887 aa7.89□□□□□ -1.15
SCARNA1-201ENST00000517138 ZC3H7AQ8IWR0 971 aaKnown RBP7.89□□□□□ -1.15
SCARNA1-201ENST00000517138 TRIM48Q8IWZ4 208 aa7.89□□□□□ -1.15
SCARNA1-201ENST00000517138 CISD2Q8N5K1 135 aaKnown RBP7.89□□□□□ -1.15
SCARNA1-201ENST00000517138 TTLL6Q8N841 843 aa7.89□□□□□ -1.15
SCARNA1-201ENST00000517138 SMURF1Q9HCE7 757 aa7.89□□□□□ -1.15
SCARNA1-201ENST00000517138 TRIM39Q9HCM9 518 aa7.89□□□□□ -1.15
SCARNA1-201ENST00000517138 NGRNQ9NPE2 291 aaKnown RBP7.89□□□□□ -1.15
SCARNA1-201ENST00000517138 CROTQ9UKG9 612 aa7.89□□□□□ -1.15
SCARNA1-201ENST00000517138 DUSP10Q9Y6W6 482 aa7.89□□□□□ -1.15
SCARNA1-201ENST00000517138 NOBOXO60393 691 aa7.88□□□□□ -1.15
SCARNA1-201ENST00000517138 CTSWP56202 376 aa7.88□□□□□ -1.15
SCARNA1-201ENST00000517138 GPR19Q15760 415 aa7.88□□□□□ -1.15
SCARNA1-201ENST00000517138 LCE1DQ5T752 114 aa7.88□□□□□ -1.15
SCARNA1-201ENST00000517138 MCTP2Q6DN12 878 aa7.88□□□□□ -1.15
SCARNA1-201ENST00000517138 C16orf59Q7L2K0 433 aa7.88□□□□□ -1.15
SCARNA1-201ENST00000517138 ZCCHC14Q8WYQ9 949 aaKnown RBP7.88□□□□□ -1.15
SCARNA1-201ENST00000517138 PCDH18Q9HCL0 1135 aa7.88□□□□□ -1.15
SCARNA1-201ENST00000517138 SRPK3Q9UPE1 567 aa7.88□□□□□ -1.15
SCARNA1-201ENST00000517138 ZNF561-AS1K7EIQ3 104 aa7.87□□□□□ -1.15
SCARNA1-201ENST00000517138 PPP1R12AO14974 1030 aaPredicted RBP7.87□□□□□ -1.15
SCARNA1-201ENST00000517138 PRICKLE3O43900 615 aaPredicted RBP7.87□□□□□ -1.15
SCARNA1-201ENST00000517138 SEC23AQ15436 765 aa7.87□□□□□ -1.15
SCARNA1-201ENST00000517138 CD276Q5ZPR3 534 aa7.87□□□□□ -1.15
SCARNA1-201ENST00000517138 DDX1Q92499 740 aaKnown RBP7.87□□□□□ -1.15
SCARNA1-201ENST00000517138 MRPL4Q9BYD3 311 aaKnown RBP7.87□□□□□ -1.15
SCARNA1-201ENST00000517138 PDGFDQ9GZP0 370 aaPredicted RBP7.87□□□□□ -1.15
SCARNA1-201ENST00000517138 HSPBP1Q9NZL4 362 aa7.87□□□□□ -1.15
SCARNA1-201ENST00000517138 RAPGEFL1Q9UHV5 662 aa7.87□□□□□ -1.15
SCARNA1-201ENST00000517138 TCRBV16S1A1N1A0A5B0 115 aa7.86□□□□□ -1.15
SCARNA1-201ENST00000517138 ESYT3A0FGR9 886 aa7.86□□□□□ -1.15
SCARNA1-201ENST00000517138 EFCAB14O75071 495 aa7.86□□□□□ -1.15
SCARNA1-201ENST00000517138 ZNF28P17035 718 aa7.86□□□□□ -1.15
SCARNA1-201ENST00000517138 ST5P78524 1137 aa7.86□□□□□ -1.15
SCARNA1-201ENST00000517138 TM4SF20Q53R12 229 aa7.86□□□□□ -1.15
SCARNA1-201ENST00000517138 BTBD8Q5XKL5 378 aa7.86□□□□□ -1.15
SCARNA1-201ENST00000517138 FERMT3Q86UX7 667 aa7.86□□□□□ -1.15
SCARNA1-201ENST00000517138 DTX3Q8N9I9 347 aa7.86□□□□□ -1.15
SCARNA1-201ENST00000517138 MAGEB10Q96LZ2 347 aaPredicted RBP7.86□□□□□ -1.15
SCARNA1-201ENST00000517138 RTEL1Q9NZ71 1219 aa7.86□□□□□ -1.15
SCARNA1-201ENST00000517138 KCNQ2O43526 872 aa7.85□□□□□ -1.15
SCARNA1-201ENST00000517138 COL6A1P12109 1028 aa7.85□□□□□ -1.15
SCARNA1-201ENST00000517138 PTPN1P18031 435 aaKnown RBP7.85□□□□□ -1.15
SCARNA1-201ENST00000517138 IL13P35225 146 aa7.85□□□□□ -1.15
SCARNA1-201ENST00000517138 GLRBP48167 497 aa7.85□□□□□ -1.15
SCARNA1-201ENST00000517138 PFKPQ01813 784 aa7.85□□□□□ -1.15
SCARNA1-201ENST00000517138 CRY1Q16526 586 aa7.85□□□□□ -1.15
SCARNA1-201ENST00000517138 RGL3Q3MIN7 710 aa7.85□□□□□ -1.15
SCARNA1-201ENST00000517138 CPZQ66K79 652 aa7.85□□□□□ -1.15
SCARNA1-201ENST00000517138 VASNQ6EMK4 673 aa7.85□□□□□ -1.15
SCARNA1-201ENST00000517138 TXNDC5Q8NBS9 432 aaKnown RBP7.85□□□□□ -1.15
SCARNA1-201ENST00000517138 RNPC3Q96LT9 517 aaKnown RBP7.85□□□□□ -1.15
SCARNA1-201ENST00000517138 CLIC6Q96NY7 704 aa7.85□□□□□ -1.15
SCARNA1-201ENST00000517138 TMEM209Q96SK2 561 aa7.85□□□□□ -1.15
SCARNA1-201ENST00000517138 SLC39A2Q9NP94 309 aa7.85□□□□□ -1.15
SCARNA1-201ENST00000517138 RIC8BQ9NVN3 520 aa7.85□□□□□ -1.15
SCARNA1-201ENST00000517138 CCDC163A0A0D9SF12 145 aa7.84□□□□□ -1.15
SCARNA1-201ENST00000517138 NFIXQ14938 502 aa7.84□□□□□ -1.15
SCARNA1-201ENST00000517138 SKIDA1Q1XH10 827 aa7.84□□□□□ -1.15
SCARNA1-201ENST00000517138 PRAMEF18Q5VWM3 479 aa7.84□□□□□ -1.15
SCARNA1-201ENST00000517138 OVCH1Q7RTY7 1134 aa7.84□□□□□ -1.15
SCARNA1-201ENST00000517138 PLD2O14939 933 aa7.83□□□□□ -1.16
SCARNA1-201ENST00000517138 IL18BPO95998 194 aa7.83□□□□□ -1.16
SCARNA1-201ENST00000517138 NAT1P18440 290 aa7.83□□□□□ -1.16
SCARNA1-201ENST00000517138 LACTBP83111 547 aaPredicted RBP7.83□□□□□ -1.16
SCARNA1-201ENST00000517138 FAM47CQ5HY64 1035 aa7.83□□□□□ -1.16
SCARNA1-201ENST00000517138 FRMD5Q7Z6J6 570 aa7.83□□□□□ -1.16
SCARNA1-201ENST00000517138 IGSF22Q8N9C0 903 aa7.83□□□□□ -1.16
SCARNA1-201ENST00000517138 DLL4Q9NR61 685 aa7.83□□□□□ -1.16
SCARNA1-201ENST00000517138 USP40Q9NVE5 1235 aa7.83□□□□□ -1.16
SCARNA1-201ENST00000517138 TMEM260Q9NX78 707 aa7.83□□□□□ -1.16
SCARNA1-201ENST00000517138 NUB1Q9Y5A7 615 aa7.83□□□□□ -1.16
SCARNA1-201ENST00000517138 ATP23Q9Y6H3 246 aa7.83□□□□□ -1.16
SCARNA1-201ENST00000517138 ZNF839A8K0R7 811 aa7.82□□□□□ -1.16
SCARNA1-201ENST00000517138 DNAJC8O75937 253 aaPredicted RBP7.82□□□□□ -1.16
SCARNA1-201ENST00000517138 ASMTLO95671 621 aa7.82□□□□□ -1.16
SCARNA1-201ENST00000517138 SDSP20132 328 aa7.82□□□□□ -1.16
SCARNA1-201ENST00000517138 GJA9P57773 515 aa7.82□□□□□ -1.16
SCARNA1-201ENST00000517138 DBPQ10586 325 aaPredicted RBP7.82□□□□□ -1.16
SCARNA1-201ENST00000517138 ZNF460Q14592 562 aa7.82□□□□□ -1.16
SCARNA1-201ENST00000517138 C21orf62-AS1Q17RA5 79 aa7.82□□□□□ -1.16
SCARNA1-201ENST00000517138 FIGNQ5HY92 759 aa7.82□□□□□ -1.16
SCARNA1-201ENST00000517138 NOSTRINQ8IVI9 506 aa7.82□□□□□ -1.16
SCARNA1-201ENST00000517138 STPG3Q8N7X2 389 aa7.82□□□□□ -1.16
SCARNA1-201ENST00000517138 RELTQ969Z4 430 aa7.82□□□□□ -1.16
SCARNA1-201ENST00000517138 CELF4Q9BZC1 486 aaKnown RBP7.82□□□□□ -1.16
SCARNA1-201ENST00000517138 ZFP69BQ9UJL9 534 aa7.82□□□□□ -1.16
SCARNA1-201ENST00000517138 FOXD2O60548 495 aaPredicted RBP7.81□□□□□ -1.16
SCARNA1-201ENST00000517138 C4BPAP04003 597 aaKnown RBP7.81□□□□□ -1.16
SCARNA1-201ENST00000517138 ENO2P09104 434 aaPredicted RBP7.81□□□□□ -1.16
SCARNA1-201ENST00000517138 MC4RP32245 332 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms