RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 TDRD3Q9H7E2 651 aaKnown RBP11.89□□□□□ -0.51
TRIM41-209ENST00000515834 FARP1Q9Y4F1 1045 aaPredicted RBP11.89□□□□□ -0.51
TRIM41-209ENST00000515834 MECOMQ03112 1051 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 GRAPQ13588 217 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 TMED2Q15363 201 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 PROSER3Q2NL68 480 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 GRAPLQ8TC17 118 aaPredicted RBP11.89□□□□□ -0.51
TRIM41-209ENST00000515834 F5H423 210 aaPredicted RBP11.89□□□□□ -0.51
TRIM41-209ENST00000515834 MSH2P43246 934 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 CCDC157Q569K6 752 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 DDX53Q86TM3 631 aaKnown RBP11.89□□□□□ -0.51
TRIM41-209ENST00000515834 CCDC51Q96ER9 411 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 COG4Q9H9E3 785 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 UPP2O95045 317 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 OCM2P0CE71 109 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 OCMP0CE72 109 aaPredicted RBP11.89□□□□□ -0.51
TRIM41-209ENST00000515834 CRKP46108 304 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 NDUFA8P51970 172 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 PTK2BQ14289 1009 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 STXBP2Q15833 593 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 PPP2R5EQ16537 467 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 SYNE4Q8N205 404 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 FBXL13Q8NEE6 735 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 TCP11Q8WWU5 503 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 SH3KBP1Q96B97 665 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 DYRK4Q9NR20 520 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 FANCLQ9NW38 375 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 AFF4Q9UHB7 1163 aaKnown RBP11.89□□□□□ -0.51
TRIM41-209ENST00000515834 ECE2O60344 883 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 HADHAP40939 763 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 SNRNP48Q6IEG0 339 aaKnown RBP11.89□□□□□ -0.51
TRIM41-209ENST00000515834 CC2D1AQ6P1N0 951 aaPredicted RBP11.89□□□□□ -0.51
TRIM41-209ENST00000515834 PARVGQ9HBI0 331 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 TRPC7Q9HCX4 862 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 STK17AQ9UEE5 414 aa11.89□□□□□ -0.51
TRIM41-209ENST00000515834 PCP11498 1178 aaKnown RBP11.88□□□□□ -0.51
TRIM41-209ENST00000515834 CPB1P15086 417 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 EN1Q05925 392 aaPredicted RBP11.88□□□□□ -0.51
TRIM41-209ENST00000515834 TUBGCP2Q9BSJ2 902 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 XAB2Q9HCS7 855 aaKnown RBP11.88□□□□□ -0.51
TRIM41-209ENST00000515834 HOXC10Q9NYD6 342 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 USH1CQ9Y6N9 552 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 LRRD1A4D1F6 860 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 TMEM247A6NEH6 219 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 OAS2P29728 719 aaKnown RBP11.88□□□□□ -0.51
TRIM41-209ENST00000515834 CACNB2Q08289 660 aaPredicted RBP11.88□□□□□ -0.51
TRIM41-209ENST00000515834 DRP2Q13474 957 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 UBE3CQ15386 1083 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 KIAA1755Q5JYT7 1200 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 NGRNQ9NPE2 291 aaKnown RBP11.88□□□□□ -0.51
TRIM41-209ENST00000515834 SLC4A7Q9Y6M7 1214 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 PFKFB2O60825 505 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 KCNJ6P48051 423 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 PPP6R3Q5H9R7 873 aaPredicted RBP11.88□□□□□ -0.51
TRIM41-209ENST00000515834 FAM117BQ6P1L5 589 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 RHPN2Q8IUC4 686 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 FAM133AQ8N9E0 248 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 TSPOAP1O95153 1857 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 AFF2P51816 1311 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 CDK8P49336 464 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 NR1H4Q96RI1 486 aaPredicted RBP11.88□□□□□ -0.51
TRIM41-209ENST00000515834 USP44Q9H0E7 712 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 PRAMEF22A3QJZ6 481 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 COPB1P53618 953 aaKnown RBP11.88□□□□□ -0.51
TRIM41-209ENST00000515834 GUCY2DQ02846 1103 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 KCNA1Q09470 495 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 SURF1Q15526 300 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 POTEDQ86YR6 584 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 LZICQ8WZA0 190 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 EDEM3Q9BZQ6 932 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 COA1Q9GZY4 146 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 FAM196BA6NMK8 535 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 GBP5Q96PP8 586 aa11.88□□□□□ -0.51
TRIM41-209ENST00000515834 TLR7Q9NYK1 1049 aaKnown RBP11.88□□□□□ -0.51
TRIM41-209ENST00000515834 GOLGA8QA0A0J9YX86 632 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 GOLGA8OA6NCC3 632 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 GOLGA8NF8WBI6 632 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 HUS1O60921 280 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 ASNSP08243 561 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 PDIA3P30101 505 aaKnown RBP11.87□□□□□ -0.51
TRIM41-209ENST00000515834 CDC25AP30304 524 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 GNGT1P63211 74 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 KLC3Q6P597 504 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 RMDN3Q96TC7 470 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 MRPL47Q9HD33 250 aaKnown RBP11.87□□□□□ -0.51
TRIM41-209ENST00000515834 IFNAR2P48551 515 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 SCRN1Q12765 414 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 PHLDB3Q6NSJ2 640 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 PIGOQ8TEQ8 1089 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 FSD1LQ9BXM9 530 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 TBK1Q9UHD2 729 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 CLCA2Q9UQC9 943 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 ZBED1O96006 694 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 PSMA2P25787 234 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 MTMR1Q13613 665 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 PTPN21Q16825 1174 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 SLC10A5Q5PT55 438 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 ZNF513Q8N8E2 541 aaPredicted RBP11.87□□□□□ -0.51
TRIM41-209ENST00000515834 PBXIP1Q96AQ6 731 aa11.87□□□□□ -0.51
TRIM41-209ENST00000515834 TMEM2Q9UHN6 1383 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms