RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CREBRFQ8IUR6 639 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 MB21D1Q8N884 522 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 DCPSQ96C86 337 aaKnown RBP16.61■□□□□ 0.25
VCAN-211ENST00000513984 DYDC2Q96IM9 177 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 TUBGCP2Q9BSJ2 902 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 RNF146Q9NTX7 359 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 ZNF214Q9UL59 606 aaPredicted RBP16.61■□□□□ 0.25
VCAN-211ENST00000513984 CCP110O43303 1012 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 CHMP2AO43633 222 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 FGFR1OPO95684 399 aaKnown RBP16.6■□□□□ 0.25
VCAN-211ENST00000513984 KRT18P05783 430 aaKnown RBP16.6■□□□□ 0.25
VCAN-211ENST00000513984 DNM2P50570 870 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 MRPS9P82933 396 aaKnown RBP16.6■□□□□ 0.25
VCAN-211ENST00000513984 VGLL4Q14135 290 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 PGM5Q15124 567 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 LRRC41Q15345 812 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 TKFCQ3LXA3 575 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 HERC4Q5GLZ8 1057 aaPredicted RBP16.6■□□□□ 0.25
VCAN-211ENST00000513984 C9orf131Q5VYM1 1079 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 CNGA4Q8IV77 575 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 SULF1Q8IWU6 871 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 RBM46Q8TBY0 533 aaKnown RBP16.6■□□□□ 0.25
VCAN-211ENST00000513984 NEK9Q8TD19 979 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 CCDC51Q96ER9 411 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 ZFP91Q96JP5 570 aaPredicted RBP16.6■□□□□ 0.25
VCAN-211ENST00000513984 TAAR1Q96RJ0 339 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 TSG101Q99816 390 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 REEP2Q9BRK0 252 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 BHMT2Q9H2M3 363 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 JADE2Q9NQC1 790 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 KCNH7Q9NS40 1196 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 RIPK3Q9Y572 518 aa16.6■□□□□ 0.25
VCAN-211ENST00000513984 SCN4AP35499 1836 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 KIF20AO95235 890 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 TPM2P07951 284 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 TPM1P09493 284 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 TNNT1P13805 278 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 FECHP22830 423 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 MAP3K9P80192 1104 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 CACNB1Q02641 598 aaPredicted RBP16.59■□□□□ 0.25
VCAN-211ENST00000513984 CTTNQ14247 550 aaKnown RBP16.59■□□□□ 0.25
VCAN-211ENST00000513984 LRRC55Q6ZSA7 311 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 PPP1R13BQ96KQ4 1090 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 PDCD2LQ9BRP1 358 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 NAA15Q9BXJ9 866 aaKnown RBP16.59■□□□□ 0.25
VCAN-211ENST00000513984 FGFBP2Q9BYJ0 223 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 PXMP2Q9NR77 195 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 TRMT1Q9NXH9 659 aaKnown RBP16.59■□□□□ 0.25
VCAN-211ENST00000513984 ADM5C9JUS6 153 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 PRKCSHP14314 528 aaPredicted RBP16.59■□□□□ 0.25
VCAN-211ENST00000513984 CASP14P31944 242 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 PRKG1Q13976 671 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 MIIPQ5JXC2 388 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 SNRNP48Q6IEG0 339 aaKnown RBP16.59■□□□□ 0.25
VCAN-211ENST00000513984 L3MBTL3Q96JM7 780 aaPredicted RBP16.59■□□□□ 0.25
VCAN-211ENST00000513984 MAF1Q9H063 256 aa16.59■□□□□ 0.25
VCAN-211ENST00000513984 AGO4Q9HCK5 861 aaKnown RBP16.59■□□□□ 0.25
VCAN-211ENST00000513984 SPDYE16A6NNV3 312 aaPredicted RBP16.58■□□□□ 0.24
VCAN-211ENST00000513984 DHX15O43143 795 aaKnown RBP16.58■□□□□ 0.24
VCAN-211ENST00000513984 EIF2AK2P19525 551 aaKnown RBP16.58■□□□□ 0.24
VCAN-211ENST00000513984 MTIF2P46199 727 aaKnown RBP16.58■□□□□ 0.24
VCAN-211ENST00000513984 FXR1P51114 621 aaKnown RBP eCLIP16.58■□□□□ 0.24
VCAN-211ENST00000513984 RAD51AP2Q09MP3 1159 aa16.58■□□□□ 0.24
VCAN-211ENST00000513984 TMEM132BQ14DG7 1078 aa16.58■□□□□ 0.24
VCAN-211ENST00000513984 PTPN14Q15678 1187 aa16.58■□□□□ 0.24
VCAN-211ENST00000513984 XRRA1Q6P2D8 792 aa16.58■□□□□ 0.24
VCAN-211ENST00000513984 NSMFQ6X4W1 530 aa16.58■□□□□ 0.24
VCAN-211ENST00000513984 TPH2Q8IWU9 490 aa16.58■□□□□ 0.24
VCAN-211ENST00000513984 SCFD1Q8WVM8 642 aa16.58■□□□□ 0.24
VCAN-211ENST00000513984 EEF2KMTQ96G04 330 aa16.58■□□□□ 0.24
VCAN-211ENST00000513984 RMDN3Q96TC7 470 aa16.58■□□□□ 0.24
VCAN-211ENST00000513984 RUSC1Q9BVN2 902 aa16.58■□□□□ 0.24
VCAN-211ENST00000513984 HOXC10Q9NYD6 342 aa16.58■□□□□ 0.24
VCAN-211ENST00000513984 B4DLN1 442 aa16.57■□□□□ 0.24
VCAN-211ENST00000513984 KIF2AO00139 706 aaPredicted RBP16.57■□□□□ 0.24
VCAN-211ENST00000513984 PPP1R12BO60237 982 aaPredicted RBP16.57■□□□□ 0.24
VCAN-211ENST00000513984 MTMR1Q13613 665 aa16.57■□□□□ 0.24
VCAN-211ENST00000513984 RINT1Q6NUQ1 792 aa16.57■□□□□ 0.24
VCAN-211ENST00000513984 CPLX3Q8WVH0 158 aa16.57■□□□□ 0.24
VCAN-211ENST00000513984 NACC1Q96RE7 527 aa16.57■□□□□ 0.24
VCAN-211ENST00000513984 TEX13BQ9BXU2 312 aa16.57■□□□□ 0.24
VCAN-211ENST00000513984 KCTD10Q9H3F6 313 aa16.57■□□□□ 0.24
VCAN-211ENST00000513984 TBC1D7Q9P0N9 293 aa16.57■□□□□ 0.24
VCAN-211ENST00000513984 CSADQ9Y600 493 aa16.57■□□□□ 0.24
VCAN-211ENST00000513984 DOCK5Q9H7D0 1870 aa16.57■□□□□ 0.24
VCAN-211ENST00000513984 FKBP3Q00688 224 aaKnown RBP16.56■□□□□ 0.24
VCAN-211ENST00000513984 ITGB3BPQ13352 177 aaPredicted RBP16.56■□□□□ 0.24
VCAN-211ENST00000513984 BAATQ14032 418 aaPredicted RBP16.56■□□□□ 0.24
VCAN-211ENST00000513984 DLK2Q6UY11 383 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 PPP4R3CPQ6ZMV5 832 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 C1orf186Q6ZWK4 172 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 EPM2AIP1Q7L775 607 aaPredicted RBP16.56■□□□□ 0.24
VCAN-211ENST00000513984 SFR1Q86XK3 245 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 ZC3H3Q8IXZ2 948 aaKnown RBP16.56■□□□□ 0.24
VCAN-211ENST00000513984 PIGOQ8TEQ8 1089 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 CEP63Q96MT8 703 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 LXNQ9BS40 222 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 NOC4LQ9BVI4 516 aaKnown RBP16.56■□□□□ 0.24
VCAN-211ENST00000513984 KCND2Q9NZV8 630 aa16.56■□□□□ 0.24
VCAN-211ENST00000513984 WRAP73Q9P2S5 460 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms