RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 C16orf86Q6ZW13 317 aa10.58□□□□□ -0.72
VCAN-210ENST00000513960 TBC1D22AQ8WUA7 517 aa10.58□□□□□ -0.72
VCAN-210ENST00000513960 ZMYND12Q9H0C1 365 aa10.58□□□□□ -0.72
VCAN-210ENST00000513960 THAP9Q9H5L6 903 aa10.58□□□□□ -0.72
VCAN-210ENST00000513960 DLEC1Q9Y238 1755 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 GPR75-ASB3A0A0A6YYF3 556 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 KIF4AO95239 1232 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 SRGNP10124 158 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 KCNB1Q14721 858 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 KIAA0753Q2KHM9 967 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 C15orf52Q6ZUT6 534 aaKnown RBP10.57□□□□□ -0.72
VCAN-210ENST00000513960 NEK8Q86SG6 692 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 FMNL3Q8IVF7 1028 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 CCDC155Q8N6L0 562 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 CASKIN2Q8WXE0 1202 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 HVCN1Q96D96 273 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 CUEDC2Q9H467 287 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 SEPT11Q9NVA2 429 aaKnown RBP10.57□□□□□ -0.72
VCAN-210ENST00000513960 ZNF831Q5JPB2 1677 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 A0A1W2PQC6 194 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 M0R2N6 131 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 MAGOHP61326 146 aaKnown RBP10.57□□□□□ -0.72
VCAN-210ENST00000513960 KDM7AQ6ZMT4 941 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 DNAAF5Q86Y56 855 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 IRF2BP1Q8IU81 584 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 KSR1Q8IVT5 923 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 MAGOHBQ96A72 148 aaKnown RBP10.57□□□□□ -0.72
VCAN-210ENST00000513960 CEP95Q96GE4 821 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 CALML4Q96GE6 196 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 MAGEF1Q9HAY2 307 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 CD2APQ9Y5K6 639 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 LAMB1P07942 1786 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 HMGB1P1B2RPK0 211 aaPredicted RBP10.57□□□□□ -0.72
VCAN-210ENST00000513960 CTNND1O60716 968 aaKnown RBP10.57□□□□□ -0.72
VCAN-210ENST00000513960 FAM107AO95990 144 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 SERPINB2P05120 415 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 SMTNP53814 917 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 MAP2K1Q02750 393 aaPredicted RBP10.57□□□□□ -0.72
VCAN-210ENST00000513960 BIRC2Q13490 618 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 NAALADL2Q58DX5 795 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 REXO1Q8N1G1 1221 aaKnown RBP10.57□□□□□ -0.72
VCAN-210ENST00000513960 MDM1Q8TC05 714 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 MGARPQ8TDB4 240 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 UBA5Q9GZZ9 404 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 TPX2Q9ULW0 747 aaKnown RBP10.57□□□□□ -0.72
VCAN-210ENST00000513960 FLT1P17948 1338 aa10.57□□□□□ -0.72
VCAN-210ENST00000513960 ZNF263O14978 683 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 BBOX1O75936 387 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 PLCG1P19174 1290 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 POLR2FP61218 127 aaKnown RBP10.56□□□□□ -0.72
VCAN-210ENST00000513960 SKOR1P84550 965 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 PICALMQ13492 652 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 SLC35G1Q2M3R5 365 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 ANKS4BQ8N8V4 417 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 CCDC63Q8NA47 563 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 MIEF2Q96C03 454 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 PIGSQ96S52 555 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 ARHGAP20Q9P2F6 1191 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 RAD51CO43502 376 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 GCFC2P16383 781 aaKnown RBP10.56□□□□□ -0.72
VCAN-210ENST00000513960 ADRA2BP18089 450 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 TECP42680 631 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 STK4Q13043 487 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 SEMA3FQ13275 785 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 RPS6KA1Q15418 735 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 TXNRD1Q16881 649 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 SLC9C1Q4G0N8 1177 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 MEX3CQ5U5Q3 659 aaKnown RBP10.56□□□□□ -0.72
VCAN-210ENST00000513960 RUFY4Q6ZNE9 571 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 TBC1D5Q92609 795 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 MTMR8Q96EF0 704 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 DDX47Q9H0S4 455 aaKnown RBP10.56□□□□□ -0.72
VCAN-210ENST00000513960 ACTR5Q9H9F9 607 aaPredicted RBP10.56□□□□□ -0.72
VCAN-210ENST00000513960 KBTBD4Q9NVX7 518 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 BIN2Q9UBW5 565 aaPredicted RBP10.56□□□□□ -0.72
VCAN-210ENST00000513960 MYH8P13535 1937 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 TRAF5O00463 557 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 RHOBTB3O94955 611 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 CCNE1P24864 410 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 TBCKQ8TEA7 893 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 LRRC45Q96CN5 670 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 SEC16BQ96JE7 1060 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 ATP8A1Q9Y2Q0 1164 aa10.56□□□□□ -0.72
VCAN-210ENST00000513960 MAST2Q6P0Q8 1798 aa10.55□□□□□ -0.72
VCAN-210ENST00000513960 EPHB6O15197 1021 aa10.55□□□□□ -0.72
VCAN-210ENST00000513960 IL1R1P14778 569 aa10.55□□□□□ -0.72
VCAN-210ENST00000513960 CCDC50Q8IVM0 306 aa10.55□□□□□ -0.72
VCAN-210ENST00000513960 NELFCDQ8IXH7 590 aa10.55□□□□□ -0.72
VCAN-210ENST00000513960 GIMAP8Q8ND71 665 aaPredicted RBP10.55□□□□□ -0.72
VCAN-210ENST00000513960 SPDL1Q96EA4 605 aa10.55□□□□□ -0.72
VCAN-210ENST00000513960 DHTKD1Q96HY7 919 aaPredicted RBP10.55□□□□□ -0.72
VCAN-210ENST00000513960 SPAG5Q96R06 1193 aa10.55□□□□□ -0.72
VCAN-210ENST00000513960 TSG101Q99816 390 aa10.55□□□□□ -0.72
VCAN-210ENST00000513960 LSM14BQ9BX40 385 aaKnown RBP10.55□□□□□ -0.72
VCAN-210ENST00000513960 NDST4Q9H3R1 872 aa10.55□□□□□ -0.72
VCAN-210ENST00000513960 DDX20Q9UHI6 824 aaKnown RBP10.55□□□□□ -0.72
VCAN-210ENST00000513960 ADAMTS1Q9UHI8 967 aa10.55□□□□□ -0.72
VCAN-210ENST00000513960 KIAA1551Q9HCM1 1747 aa10.55□□□□□ -0.72
VCAN-210ENST00000513960 ENO4A6NNW6 628 aa10.55□□□□□ -0.72
VCAN-210ENST00000513960 SLC8A1P32418 973 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms