RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 USP38Q8NB14 1042 aa6.99□□□□□ -1.29
GYPB-215ENST00000513677 SLC44A5Q8NCS7 719 aa6.99□□□□□ -1.29
GYPB-215ENST00000513677 MAML3Q96JK9 1138 aa6.99□□□□□ -1.29
GYPB-215ENST00000513677 SMG9Q9H0W8 520 aaKnown RBP6.99□□□□□ -1.29
GYPB-215ENST00000513677 GPR108Q9NPR9 543 aa6.99□□□□□ -1.29
GYPB-215ENST00000513677 TMEM39AQ9NV64 488 aa6.99□□□□□ -1.29
GYPB-215ENST00000513677 MCM9Q9NXL9 1143 aa6.99□□□□□ -1.29
GYPB-215ENST00000513677 HOXC10Q9NYD6 342 aa6.99□□□□□ -1.29
GYPB-215ENST00000513677 FRRS1LQ9P0K9 344 aa6.99□□□□□ -1.29
GYPB-215ENST00000513677 KANSL3Q9P2N6 904 aa6.99□□□□□ -1.29
GYPB-215ENST00000513677 DBNLQ9UJU6 430 aaKnown RBP6.99□□□□□ -1.29
GYPB-215ENST00000513677 ZNFX1Q9P2E3 1918 aaKnown RBP6.99□□□□□ -1.29
GYPB-215ENST00000513677 COL11A1P12107 1806 aaPredicted RBP6.99□□□□□ -1.29
GYPB-215ENST00000513677 ZNF236Q9UL36 1845 aa6.99□□□□□ -1.29
GYPB-215ENST00000513677 STRNO43815 780 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 NID1P14543 1247 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 TAL1P17542 331 aaPredicted RBP6.98□□□□□ -1.29
GYPB-215ENST00000513677 COL8A1P27658 744 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 FPGSQ05932 587 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 HYAL2Q12891 473 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 COL9A3Q14050 684 aaPredicted RBP6.98□□□□□ -1.29
GYPB-215ENST00000513677 CCDC85BQ15834 202 aaPredicted RBP6.98□□□□□ -1.29
GYPB-215ENST00000513677 KIAA1755Q5JYT7 1200 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 RNF180Q86T96 592 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 AACSQ86V21 672 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 TRMT2AQ8IZ69 625 aaKnown RBP6.98□□□□□ -1.29
GYPB-215ENST00000513677 SDR42E1Q8WUS8 393 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 ARHGAP45Q92619 1136 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 PLD4Q96BZ4 506 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 EAF2Q96CJ1 260 aaPredicted RBP6.98□□□□□ -1.29
GYPB-215ENST00000513677 DYNLL2Q96FJ2 89 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 MMP19Q99542 508 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 DNAJC2Q99543 621 aaKnown RBP6.98□□□□□ -1.29
GYPB-215ENST00000513677 PLVAPQ9BX97 442 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 CRNKL1Q9BZJ0 848 aaKnown RBP6.98□□□□□ -1.29
GYPB-215ENST00000513677 RBSNQ9H1K0 784 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 EHD4Q9H223 541 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 MROH8Q9H579 483 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 NOP53Q9NZM5 478 aaKnown RBP6.98□□□□□ -1.29
GYPB-215ENST00000513677 FOXD3Q9UJU5 478 aaPredicted RBP6.98□□□□□ -1.29
GYPB-215ENST00000513677 TACC3Q9Y6A5 838 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 A0A0G2JMZ2 1700 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 PLXNA1Q9UIW2 1896 aa6.98□□□□□ -1.29
GYPB-215ENST00000513677 TMEM265A0A087WTH1 108 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 A0A1W2PQ45 241 aaPredicted RBP6.97□□□□□ -1.29
GYPB-215ENST00000513677 A0A1W2PQY0 241 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 SMCHD1A6NHR9 2005 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 GRXCR1A8MXD5 290 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 TNFRSF21O75509 655 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 AKR1B1P15121 316 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 CES1P23141 567 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 AFF1P51825 1210 aaKnown RBP6.97□□□□□ -1.29
GYPB-215ENST00000513677 ATP8B2P98198 1209 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 ICA1Q05084 483 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 KCTD2Q14681 263 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 TMEM132BQ14DG7 1078 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 SLC9C2Q5TAH2 1124 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 ITPRIPQ8IWB1 547 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 FTSJ3Q8IY81 847 aaKnown RBP6.97□□□□□ -1.29
GYPB-215ENST00000513677 STK11IPQ8N1F8 1099 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 SHCBP1Q8NEM2 672 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 SSH3Q8TE77 659 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 SNX29Q8TEQ0 813 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 TIFAQ96CG3 184 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 CHRDQ9H2X0 955 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 PRDM12Q9H4Q4 367 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 ARMT1Q9H993 441 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 IL1RAPL2Q9NP60 686 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 STARD7Q9NQZ5 370 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 FBXO28Q9NVF7 368 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 ZHX1Q9UKY1 873 aaPredicted RBP6.97□□□□□ -1.29
GYPB-215ENST00000513677 EXOC6BQ9Y2D4 811 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 PRUNE2Q8WUY3 3088 aa6.97□□□□□ -1.29
GYPB-215ENST00000513677 BAZ2AQ9UIF9 1905 aaKnown RBP6.96□□□□□ -1.3
GYPB-215ENST00000513677 CYP2D7A0A087X1C5 515 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.96□□□□□ -1.3
GYPB-215ENST00000513677 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.96□□□□□ -1.3
GYPB-215ENST00000513677 DCDC2CA8MYV0 355 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 PATL2C9JE40 543 aaKnown RBP6.96□□□□□ -1.3
GYPB-215ENST00000513677 GOLIM4O00461 696 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 PHACTR2O75167 634 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 KIF4AO95239 1232 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 PDE6AP16499 860 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 ATP11AP98196 1134 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 SNX17Q15036 470 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 ZKSCAN2Q63HK3 967 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 TMEM179Q6ZVK1 233 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 CERS3Q8IU89 383 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 LCORLQ8N3X6 602 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 MB21D1Q8N884 522 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 ZNF512BQ96KM6 892 aaPredicted RBP6.96□□□□□ -1.3
GYPB-215ENST00000513677 SPACA7Q96KW9 195 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.96□□□□□ -1.3
GYPB-215ENST00000513677 RIOK1Q9BRS2 568 aaKnown RBP6.96□□□□□ -1.3
GYPB-215ENST00000513677 TINF2Q9BSI4 451 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 ZNF576Q9H609 170 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 SH2D4AQ9H788 454 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 CNPY2Q9Y2B0 182 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 ZNF532Q9HCE3 1301 aa6.96□□□□□ -1.3
GYPB-215ENST00000513677 PARP14Q460N5 1801 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms