RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 PDHA1P08559 390 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 MAP3K21Q5TCX8 1036 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 RTKN2Q8IZC4 609 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 PDCD7Q8N8D1 485 aaKnown RBP12.2□□□□□ -0.46
TCOF1-211ENST00000513346 KCNV2Q8TDN2 545 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 Q9H521 79 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 ANKZF1Q9H8Y5 726 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 RFX7Q2KHR2 1363 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 ZNF185O15231 689 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 DIAPH2O60879 1101 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 FOXR1Q6PIV2 292 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 CNPY4Q8N129 248 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.2□□□□□ -0.46
TCOF1-211ENST00000513346 RILPQ96NA2 401 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 TUBB6Q9BUF5 446 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 PIM2Q9P1W9 311 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 STOML1Q9UBI4 398 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 DLC1Q96QB1 1528 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 NDC80O14777 642 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 NPR1P16066 1061 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 HSPA6P17066 643 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 RANBP1P43487 201 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 SEC24CP53992 1094 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 EXOSC10Q01780 885 aaKnown RBP12.2□□□□□ -0.46
TCOF1-211ENST00000513346 PTGISQ16647 500 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 CYB5D1Q6P9G0 228 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 LRRC47Q8N1G4 583 aaKnown RBP12.2□□□□□ -0.46
TCOF1-211ENST00000513346 CYFIP2Q96F07 1278 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 NT5C3AQ9H0P0 336 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.2□□□□□ -0.46
TCOF1-211ENST00000513346 LIMA1Q9UHB6 759 aaKnown RBP12.2□□□□□ -0.46
TCOF1-211ENST00000513346 CAPN11Q9UMQ6 739 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 GINS2Q9Y248 185 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 STK24Q9Y6E0 443 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 ZC3H13Q5T200 1668 aaKnown RBP12.2□□□□□ -0.46
TCOF1-211ENST00000513346 SOS2Q07890 1332 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-211ENST00000513346 DCCP43146 1447 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 MAPK13O15264 365 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 DYNLL1P63167 89 aaKnown RBP12.2□□□□□ -0.46
TCOF1-211ENST00000513346 ARHGEF6Q15052 776 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 FAM26FQ5R3K3 315 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 CCDC125Q86Z20 511 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 SEC16BQ96JE7 1060 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 MAP2K7O14733 419 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 FKBP3Q00688 224 aaKnown RBP12.19□□□□□ -0.46
TCOF1-211ENST00000513346 ICA1Q05084 483 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 ADAM9Q13443 819 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 CUL4BQ13620 913 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 ARHGAP44Q17R89 818 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 BARGINQ6ZT62 677 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 MAEAQ7L5Y9 396 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 SMCR8Q8TEV9 937 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-211ENST00000513346 RIC8AQ9NPQ8 531 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 PIH1D3Q9NQM4 214 aaKnown RBP12.19□□□□□ -0.46
TCOF1-211ENST00000513346 LAD1O00515 517 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 KRT14P02533 472 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 DR1Q01658 176 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 RASGRF1Q13972 1273 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 GALNT17Q6IS24 598 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 LCORLQ8N3X6 602 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 BBOF1Q8ND07 529 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 ZIM3Q96PE6 472 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 CENPKQ9BS16 269 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 OSBPL1AQ9BXW6 950 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 ECT2Q9H8V3 914 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 NOD1Q9Y239 953 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 NBPF26B4DH59 902 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 STXBP3O00186 592 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 NCK2O43639 380 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 DDAH1O94760 285 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 VPS41P49754 854 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 EXOC3L4Q17RC7 722 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 MAP7D1Q3KQU3 841 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 NBPF15Q8N660 670 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 AK8Q96MA6 479 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 ADGRB1O14514 1584 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 WDR19Q8NEZ3 1342 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 NRXN1Q9ULB1 1477 aa12.19□□□□□ -0.46
TCOF1-211ENST00000513346 H0Y3Z8 333 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 GOLGA8HP0CJ92 632 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 PCP11498 1178 aaKnown RBP12.18□□□□□ -0.46
TCOF1-211ENST00000513346 SCP2P22307 547 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 RWDD2BP57060 319 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 NRKQ7Z2Y5 1582 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 MMGT1Q8N4V1 131 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 AZI2Q9H6S1 392 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 AS3MTQ9HBK9 375 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 PCDHB13Q9Y5F0 798 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 STK36Q9NRP7 1315 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 PRCPP42785 496 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 MCAMP43121 646 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 LGSNQ5TDP6 509 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 STOX1Q6ZVD7 989 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 GDAP1Q8TB36 358 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 KCNB2Q92953 911 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 RNPC3Q96LT9 517 aaKnown RBP12.18□□□□□ -0.46
TCOF1-211ENST00000513346 CFAP57Q96MR6 1250 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 METTL14Q9HCE5 456 aaKnown RBP12.18□□□□□ -0.46
TCOF1-211ENST00000513346 POLD4Q9HCU8 107 aa12.18□□□□□ -0.46
TCOF1-211ENST00000513346 ZSWIM5Q9P217 1185 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms