RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 IMPACTQ9P2X3 320 aa5.16□□□□□ -1.58
PDLIM5-218ENST00000513341 KLHL3Q9UH77 587 aa5.16□□□□□ -1.58
PDLIM5-218ENST00000513341 PKD1L3Q7Z443 1732 aa5.16□□□□□ -1.58
PDLIM5-218ENST00000513341 KIAA1551Q9HCM1 1747 aa5.16□□□□□ -1.58
PDLIM5-218ENST00000513341 DNAJA2O60884 412 aa5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 DBHP09172 617 aa5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 ST13P50502 369 aaKnown RBP5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 MAP2K1Q02750 393 aaPredicted RBP5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 MVKQ03426 396 aa5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 BNC2Q6ZN30 1099 aaPredicted RBP5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 B3GNT8Q7Z7M8 397 aa5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 TMEM52Q8NDY8 209 aa5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 LOXL4Q96JB6 756 aa5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 JMJD8Q96S16 334 aa5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 SSBP3Q9BWW4 388 aaPredicted RBP5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 TLR6Q9Y2C9 796 aa5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 POLR3KQ9Y2Y1 108 aaPredicted RBP5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 TSC22D4Q9Y3Q8 395 aa5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 MAP3K19Q56UN5 1328 aa5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 PCDH11XQ9BZA7 1347 aa5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 PCDH11YQ9BZA8 1340 aa5.15□□□□□ -1.59
PDLIM5-218ENST00000513341 KDM6AO15550 1401 aaPredicted RBP5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 CD163L1Q9NR16 1453 aa5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 FZD7O75084 574 aa5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 LDHBP07195 334 aaKnown RBP5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 AMPHP49418 695 aa5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 LBX1P52954 281 aa5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 SNW1Q13573 536 aaKnown RBP5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 TBC1D10BQ4KMP7 808 aaPredicted RBP5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 USP51Q70EK9 711 aa5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 HDGFL2Q7Z4V5 671 aaPredicted RBP5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 ZNF761Q86XN6 746 aaPredicted RBP5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 NME9Q86XW9 330 aa5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 PIGBQ92521 554 aa5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 LTV1Q96GA3 475 aaPredicted RBP5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 PUS7Q96PZ0 661 aaKnown RBP5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 WDR26Q9H7D7 661 aa5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 CHST7Q9NS84 486 aa5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 TERF2IPQ9NYB0 399 aa5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 FAN1Q9Y2M0 1017 aa5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 CNTNAP1P78357 1384 aa5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 MON2Q7Z3U7 1717 aa5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 TOGARAM1Q9Y4F4 1720 aa5.14□□□□□ -1.59
PDLIM5-218ENST00000513341 CCDC85CA6NKD9 419 aa5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 RPS6KA4O75676 772 aa5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 F13A1P00488 732 aa5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 GYS1P13807 737 aa5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 HOXC9P31274 260 aa5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 RFC4P35249 363 aa5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 CCNFP41002 786 aa5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 SARSP49591 514 aaKnown RBP5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 CORO7P57737 925 aa5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 KCNA1Q09470 495 aa5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 NBPF6Q5VWK0 638 aa5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 SMIM5Q71RC9 77 aa5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 AEBP1Q8IUX7 1158 aa5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 NBPF4Q96M43 638 aa5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 NTMQ9P121 344 aa5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 MAP2P11137 1827 aaKnown RBP5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 ITGB4P16144 1822 aa5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 SBNO2Q9Y2G9 1366 aa5.13□□□□□ -1.59
PDLIM5-218ENST00000513341 C4AP0C0L4 1744 aa5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 VIRMAQ69YN4 1812 aaKnown RBP5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 CYP27B1O15528 508 aa5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 VAV1P15498 845 aa5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 CAMK2GQ13555 558 aaPredicted RBP5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 DEFB115Q30KQ5 88 aa5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 CRB2Q5IJ48 1285 aa5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 HLA-DQA1Q5Y7H0 255 aa5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 COG3Q96JB2 828 aa5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 CDADC1Q9BWV3 514 aa5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 PCED1AQ9H1Q7 454 aa5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 PASKQ96RG2 1323 aa5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 EDC4Q6P2E9 1401 aaKnown RBP5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 SMG6Q86US8 1419 aaKnown RBP5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 MEGF6O75095 1541 aa5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 PDE4DIPQ5VU43 2346 aa5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 ZNF831Q5JPB2 1677 aa5.12□□□□□ -1.59
PDLIM5-218ENST00000513341 CCDC88AQ3V6T2 1871 aa5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 IQCA1LA6NCM1 817 aa5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 RASSF10A6NK89 507 aa5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 PRPF40AO75400 957 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 P4HBP07237 508 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 ASGR2P07307 311 aa5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 HSPA8P11142 646 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 TM4SF1P30408 202 aa5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 CTSKP43235 329 aa5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 ITPK1Q13572 414 aa5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 MPP2Q14168 576 aa5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 CDCP2Q5VXM1 449 aa5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 TTLL6Q8N841 843 aa5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 CHST13Q8NET6 341 aa5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 CPA5Q8WXQ8 436 aa5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 SRRTQ9BXP5 876 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 PDLIM7Q9NR12 457 aa5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 TMOD3Q9NYL9 352 aa5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 RTL1A6NKG5 1358 aa5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 KIF24Q5T7B8 1368 aa5.11□□□□□ -1.59
PDLIM5-218ENST00000513341 RGPD2P0DJD1 1756 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms