RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 ISCUQ9H1K1 167 aa12.71□□□□□ -0.37
SNX25-205ENST00000512853 TAF1DQ9H5J8 278 aaPredicted RBP12.71□□□□□ -0.37
SNX25-205ENST00000512853 VAT1LQ9HCJ6 419 aa12.71□□□□□ -0.37
SNX25-205ENST00000512853 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNX25-205ENST00000512853 MEFVO15553 781 aaPredicted RBP12.7□□□□□ -0.38
SNX25-205ENST00000512853 GCFC2P16383 781 aaKnown RBP12.7□□□□□ -0.38
SNX25-205ENST00000512853 PLCG2P16885 1265 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 ANXA13P27216 316 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 USP11P51784 963 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 GUCY2FP51841 1108 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 ITGB3BPQ13352 177 aaPredicted RBP12.7□□□□□ -0.38
SNX25-205ENST00000512853 CUL1Q13616 776 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 KIAA0753Q2KHM9 967 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 DPY19L2P1Q6NXN4 242 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 KCNV1Q6PIU1 500 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 PPP4R3CPQ6ZMV5 832 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 CCDC65Q8IXS2 484 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 TEX11Q8IYF3 940 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 PRPF38AQ8NAV1 312 aaKnown RBP12.7□□□□□ -0.38
SNX25-205ENST00000512853 ZNF473Q8WTR7 871 aaKnown RBP12.7□□□□□ -0.38
SNX25-205ENST00000512853 SCFD2Q8WU76 684 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 TAF4BQ92750 862 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 HAS1Q92839 578 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 COA7Q96BR5 231 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 CALR3Q96L12 384 aaKnown RBP12.7□□□□□ -0.38
SNX25-205ENST00000512853 PACSIN1Q9BY11 444 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 FGFBP2Q9BYJ0 223 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 NT5C3AQ9H0P0 336 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 KCTD10Q9H3F6 313 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 TMBIM4Q9HC24 238 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 NENFQ9UMX5 172 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 KIAA0754O94854 1291 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 KIF4AO95239 1232 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 ZBTB48P10074 688 aaPredicted RBP12.7□□□□□ -0.38
SNX25-205ENST00000512853 ECHS1P30084 290 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 MDH1P40925 334 aaKnown RBP12.7□□□□□ -0.38
SNX25-205ENST00000512853 ERVK-9P63128 1117 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 EDRF1Q3B7T1 1238 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 RC3H1Q5TC82 1133 aaKnown RBP12.7□□□□□ -0.38
SNX25-205ENST00000512853 ACTRT1Q8TDG2 376 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 DDX25Q9UHL0 483 aaKnown RBP12.7□□□□□ -0.38
SNX25-205ENST00000512853 PLAAQ9Y263 795 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 SPATA31A5Q5VU36 1347 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 SPATA31A7Q8IWB4 1347 aa12.7□□□□□ -0.38
SNX25-205ENST00000512853 GREB1LQ9C091 1923 aaPredicted RBP12.7□□□□□ -0.38
SNX25-205ENST00000512853 IGKV6D-41A0A0C4DH26 115 aa12.69□□□□□ -0.38
SNX25-205ENST00000512853 FRMD3A2A2Y4 597 aa12.69□□□□□ -0.38
SNX25-205ENST00000512853 KCNQ2O43526 872 aa12.69□□□□□ -0.38
SNX25-205ENST00000512853 ERCC3P19447 782 aa12.69□□□□□ -0.38
SNX25-205ENST00000512853 HNRNPH1P31943 449 aaKnown RBP12.69□□□□□ -0.38
SNX25-205ENST00000512853 USP8P40818 1118 aa12.69□□□□□ -0.38
SNX25-205ENST00000512853 TNNI2P48788 182 aa12.69□□□□□ -0.38
SNX25-205ENST00000512853 RHBDL3P58872 404 aa12.69□□□□□ -0.38
SNX25-205ENST00000512853 GUCY1A3Q02108 690 aa12.69□□□□□ -0.38
SNX25-205ENST00000512853 GRAPQ13588 217 aa12.69□□□□□ -0.38
SNX25-205ENST00000512853 RPS6KA1Q15418 735 aa12.69□□□□□ -0.38
SNX25-205ENST00000512853 IFI16Q16666 785 aaKnown RBP12.69□□□□□ -0.38
SNX25-205ENST00000512853 TPTE2Q6XPS3 522 aa12.69□□□□□ -0.38
SNX25-205ENST00000512853 BARGINQ6ZT62 677 aa12.69□□□□□ -0.38
SNX25-205ENST00000512853 ARFGAP2Q8N6H7 521 aa12.69□□□□□ -0.38
SNX25-205ENST00000512853 FAM133AQ8N9E0 248 aa12.69□□□□□ -0.38
SNX25-205ENST00000512853 LRRC57Q8N9N7 239 aa12.69□□□□□ -0.38
SNX25-205ENST00000512853 MYCBPAPQ8TBZ2 947 aa12.69□□□□□ -0.38
SNX25-205ENST00000512853 GRAPLQ8TC17 118 aaPredicted RBP12.69□□□□□ -0.38
SNX25-205ENST00000512853 NAP1L4Q99733 375 aaKnown RBP12.69□□□□□ -0.38
SNX25-205ENST00000512853 BMP2KQ9NSY1 1161 aaPredicted RBP12.69□□□□□ -0.38
SNX25-205ENST00000512853 SRP68Q9UHB9 627 aaKnown RBP12.69□□□□□ -0.38
SNX25-205ENST00000512853 PACSIN2Q9UNF0 486 aaPredicted RBP12.69□□□□□ -0.38
SNX25-205ENST00000512853 FRMPD2Q68DX3 1309 aaPredicted RBP12.69□□□□□ -0.38
SNX25-205ENST00000512853 H0YGN5 161 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 RPS6KA4O75676 772 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 NLRP14Q86W24 1093 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 OTUD6BQ8N6M0 293 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 C3orf20Q8ND61 904 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 SCFD1Q8WVM8 642 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 FAM163AQ96GL9 167 aaPredicted RBP12.68□□□□□ -0.38
SNX25-205ENST00000512853 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.68□□□□□ -0.38
SNX25-205ENST00000512853 NFS1Q9Y697 457 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 BZW2Q9Y6E2 419 aaKnown RBP12.68□□□□□ -0.38
SNX25-205ENST00000512853 GAKO14976 1311 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 PNMA6FA0A0J9YX94 578 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 FAM107AO95990 144 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 PRKCIP41743 596 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 DNA2P51530 1060 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 TRADDQ15628 312 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 UAP1Q16222 522 aaPredicted RBP12.68□□□□□ -0.38
SNX25-205ENST00000512853 UBE2SQ16763 222 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 CEP85LQ5SZL2 805 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 FBXW10Q5XX13 1052 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 IRF2BP2Q7Z5L9 587 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 NELFCDQ8IXH7 590 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 LRRC45Q96CN5 670 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 MTMR4Q9NYA4 1195 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 ANKIB1Q9P2G1 1089 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 ADAMTS1Q9UHI8 967 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 PITPNM2Q9BZ72 1349 aa12.68□□□□□ -0.38
SNX25-205ENST00000512853 PPP1R11O60927 126 aaPredicted RBP12.67□□□□□ -0.38
SNX25-205ENST00000512853 ZPR1O75312 459 aa12.67□□□□□ -0.38
SNX25-205ENST00000512853 PLA2G4BP0C869 781 aa12.67□□□□□ -0.38
SNX25-205ENST00000512853 CYP11B2P19099 503 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms