RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 RAD21O60216 631 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 CYP1A1P04798 512 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-208ENST00000511604 HSPD1P10809 573 aaKnown RBP7.97□□□□□ -1.13
CPNE4-208ENST00000511604 ETS2P15036 469 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 HSD17B3P37058 310 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 KLK7P49862 253 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 TOB1P50616 345 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-208ENST00000511604 MTTPP55157 894 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 DHX9Q08211 1270 aaKnown RBP7.97□□□□□ -1.13
CPNE4-208ENST00000511604 ITGA7Q13683 1181 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 KRT31Q15323 416 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 CFAP157Q5JU67 520 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 ZNF362Q5T0B9 420 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-208ENST00000511604 NT5DC1Q5TFE4 455 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 CDKAL1Q5VV42 579 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 SPATA1Q5VX52 437 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 KRT40Q6A162 431 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 MIGA2Q7L4E1 593 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 TXNDC2Q86VQ3 553 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 DZIP1Q86YF9 867 aaKnown RBP7.97□□□□□ -1.13
CPNE4-208ENST00000511604 LRRC34Q8IZ02 419 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 TRIML1Q8N9V2 468 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 PIGOQ8TEQ8 1089 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 IQCDQ96DY2 449 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 MS4A14Q96JA4 679 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 ZNF333Q96JL9 665 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 SNX27Q96L92 541 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 PURBQ96QR8 312 aaKnown RBP7.97□□□□□ -1.13
CPNE4-208ENST00000511604 PFDN4Q9NQP4 134 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 ARHGEF38Q9NXL2 777 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 TRIM33Q9UPN9 1127 aa7.97□□□□□ -1.13
CPNE4-208ENST00000511604 CEP170BQ9Y4F5 1589 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-208ENST00000511604 PRR36Q9H6K5 1346 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 TTC26A0AVF1 554 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 GOLGA8AA7E2F4 631 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 RGL2O15211 777 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 NVLO15381 856 aaKnown RBP7.96□□□□□ -1.13
CPNE4-208ENST00000511604 LDHAP00338 332 aaKnown RBP7.96□□□□□ -1.13
CPNE4-208ENST00000511604 SHBGP04278 402 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 PDGFRBP09619 1106 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 SKIP12755 728 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 TCP1P17987 556 aaKnown RBP7.96□□□□□ -1.13
CPNE4-208ENST00000511604 CTNNA1P35221 906 aaKnown RBP7.96□□□□□ -1.13
CPNE4-208ENST00000511604 PAFAH1B1P43034 410 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 NEK2P51955 445 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 MAP7Q14244 749 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 TTC39AQ5SRH9 613 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 GRAMD4Q6IC98 578 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 NFRKBQ6P4R8 1299 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 KLC3Q6P597 504 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 KRT26Q7Z3Y9 468 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 MAP7D3Q8IWC1 876 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 NME8Q8N427 588 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 ENDOVQ8N8Q3 282 aaKnown RBP7.96□□□□□ -1.13
CPNE4-208ENST00000511604 CXorf38Q8TB03 319 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 CASKIN2Q8WXE0 1202 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 GATA6Q92908 595 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 RAB3IPQ96QF0 476 aaPredicted RBP7.96□□□□□ -1.13
CPNE4-208ENST00000511604 SRPK1Q96SB4 655 aaKnown RBP7.96□□□□□ -1.13
CPNE4-208ENST00000511604 SIKE1Q9BRV8 207 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 MYL10Q9BUA6 226 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 DDX23Q9BUQ8 820 aaKnown RBP7.96□□□□□ -1.13
CPNE4-208ENST00000511604 NMRK1Q9NWW6 199 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 N6AMT1Q9Y5N5 214 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 STK24Q9Y6E0 443 aa7.96□□□□□ -1.13
CPNE4-208ENST00000511604 C3P01024 1663 aa7.96□□□□□ -1.14
CPNE4-208ENST00000511604 FAM208AQ9UK61 1670 aaKnown RBP7.96□□□□□ -1.14
CPNE4-208ENST00000511604 SIGLEC16A6NMB1 481 aa7.96□□□□□ -1.14
CPNE4-208ENST00000511604 WASLO00401 505 aaPredicted RBP7.96□□□□□ -1.14
CPNE4-208ENST00000511604 ACTN4O43707 911 aaKnown RBP7.96□□□□□ -1.14
CPNE4-208ENST00000511604 ATP9AO75110 1047 aa7.96□□□□□ -1.14
CPNE4-208ENST00000511604 PPP6R2O75170 966 aa7.96□□□□□ -1.14
CPNE4-208ENST00000511604 MMEP08473 750 aa7.96□□□□□ -1.14
CPNE4-208ENST00000511604 AIMP1Q12904 312 aaKnown RBP7.96□□□□□ -1.14
CPNE4-208ENST00000511604 UAP1Q16222 522 aaPredicted RBP7.96□□□□□ -1.14
CPNE4-208ENST00000511604 PUS10Q3MIT2 529 aaKnown RBP7.96□□□□□ -1.14
CPNE4-208ENST00000511604 ZC2HC1CQ53FD0 456 aaPredicted RBP7.96□□□□□ -1.14
CPNE4-208ENST00000511604 DAAM2Q86T65 1068 aa7.96□□□□□ -1.14
CPNE4-208ENST00000511604 TAF4BQ92750 862 aa7.96□□□□□ -1.14
CPNE4-208ENST00000511604 FERMT2Q96AC1 680 aa7.96□□□□□ -1.14
CPNE4-208ENST00000511604 HAUS1Q96CS2 278 aa7.96□□□□□ -1.14
CPNE4-208ENST00000511604 NUDCD1Q96RS6 583 aa7.96□□□□□ -1.14
CPNE4-208ENST00000511604 MLXIPQ9HAP2 919 aa7.96□□□□□ -1.14
CPNE4-208ENST00000511604 HESX1Q9UBX0 185 aa7.96□□□□□ -1.14
CPNE4-208ENST00000511604 ZNF148Q9UQR1 794 aa7.96□□□□□ -1.14
CPNE4-208ENST00000511604 CAPN6Q9Y6Q1 641 aa7.96□□□□□ -1.14
CPNE4-208ENST00000511604 ZNF142P52746 1687 aaPredicted RBP7.96□□□□□ -1.14
CPNE4-208ENST00000511604 GNAT3A8MTJ3 354 aa7.95□□□□□ -1.14
CPNE4-208ENST00000511604 PPP1R3GB7ZBB8 358 aa7.95□□□□□ -1.14
CPNE4-208ENST00000511604 ZNF263O14978 683 aa7.95□□□□□ -1.14
CPNE4-208ENST00000511604 SEMA3EO15041 775 aa7.95□□□□□ -1.14
CPNE4-208ENST00000511604 PYGMP11217 842 aa7.95□□□□□ -1.14
CPNE4-208ENST00000511604 PORP16435 677 aaPredicted RBP7.95□□□□□ -1.14
CPNE4-208ENST00000511604 GM2AP17900 193 aa7.95□□□□□ -1.14
CPNE4-208ENST00000511604 GUCY1A2P33402 732 aa7.95□□□□□ -1.14
CPNE4-208ENST00000511604 GEMIN4P57678 1058 aaKnown RBP7.95□□□□□ -1.14
CPNE4-208ENST00000511604 RCN1Q15293 331 aa7.95□□□□□ -1.14
CPNE4-208ENST00000511604 LIN52Q52LA3 116 aa7.95□□□□□ -1.14
CPNE4-208ENST00000511604 SYDE2Q5VT97 1194 aa7.95□□□□□ -1.14
CPNE4-208ENST00000511604 DAB2IPQ5VWQ8 1189 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms