RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 STRNO43815 780 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 FCGRTP55899 365 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 IGBP1P78318 339 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 BEX3Q00994 111 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 SPIRE1Q08AE8 756 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 KIF22Q14807 665 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 GLG1Q92896 1179 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 SLC5A5Q92911 643 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 HHIPL1Q96JK4 782 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 SPATA33Q96N06 139 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 PPP1R16BQ96T49 567 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 LXNQ9BS40 222 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 CLSTN2Q9H4D0 955 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 JPH1Q9HDC5 661 aaPredicted RBP9.03□□□□□ -0.96
SMAD1-209ENST00000511125 HPSEQ9Y251 543 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 TRIM17Q9Y577 477 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 PCDHA5Q9Y5H7 936 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 SLITRK3O94933 977 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 KCNA2P16389 499 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 NAALADL2Q58DX5 795 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 IQUBQ8NA54 791 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 SHCBP1Q8NEM2 672 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 PAGE5Q96GU1 130 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 FAM20AQ96MK3 541 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 ANP32EQ9BTT0 268 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 SLC9A2Q9UBY0 812 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 GJD2Q9UKL4 321 aa9.03□□□□□ -0.96
SMAD1-209ENST00000511125 ZNFX1Q9P2E3 1918 aaKnown RBP9.03□□□□□ -0.96
SMAD1-209ENST00000511125 ADGRA2Q96PE1 1338 aa9.02□□□□□ -0.96
SMAD1-209ENST00000511125 LAD1O00515 517 aa9.02□□□□□ -0.96
SMAD1-209ENST00000511125 ACTN4O43707 911 aaKnown RBP9.02□□□□□ -0.96
SMAD1-209ENST00000511125 ALDH1A1P00352 501 aa9.02□□□□□ -0.96
SMAD1-209ENST00000511125 ZNF286BP0CG31 522 aa9.02□□□□□ -0.96
SMAD1-209ENST00000511125 SPATA31C1P0DKV0 1188 aa9.02□□□□□ -0.96
SMAD1-209ENST00000511125 FXR2P51116 673 aaKnown RBP eCLIP9.02□□□□□ -0.96
SMAD1-209ENST00000511125 ACTR2P61160 394 aa9.02□□□□□ -0.96
SMAD1-209ENST00000511125 ACVR2BQ13705 512 aa9.02□□□□□ -0.96
SMAD1-209ENST00000511125 MCTP2Q6DN12 878 aa9.02□□□□□ -0.96
SMAD1-209ENST00000511125 FAM177A1Q8N128 213 aaPredicted RBP9.02□□□□□ -0.96
SMAD1-209ENST00000511125 SH3TC2Q8TF17 1288 aa9.02□□□□□ -0.96
SMAD1-209ENST00000511125 GTF3C2Q8WUA4 911 aaPredicted RBP9.02□□□□□ -0.96
SMAD1-209ENST00000511125 SYAP1Q96A49 352 aaPredicted RBP9.02□□□□□ -0.96
SMAD1-209ENST00000511125 CCDC43Q96MW1 224 aaKnown RBP9.02□□□□□ -0.96
SMAD1-209ENST00000511125 DNAJC25Q9H1X3 360 aa9.02□□□□□ -0.96
SMAD1-209ENST00000511125 DOCK5Q9H7D0 1870 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 SPATA31C2B4DYI2 1134 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 MAP2K2P36507 400 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 PRPHP41219 470 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 SETQ01105 290 aaPredicted RBP9.02□□□□□ -0.97
SMAD1-209ENST00000511125 SASS6Q6UVJ0 657 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 CCDC60Q8IWA6 550 aaPredicted RBP9.02□□□□□ -0.97
SMAD1-209ENST00000511125 RAET1EQ8TD07 263 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 AFG1LQ8WV93 481 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 TRAPPC12Q8WVT3 735 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 TRIB2Q92519 343 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 MBOAT7Q96N66 472 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 IWS1Q96ST2 819 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 MAP3K20Q9NYL2 800 aaKnown RBP9.02□□□□□ -0.97
SMAD1-209ENST00000511125 SLC15A5A6NIM6 579 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 ASB14A6NK59 587 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 PGK1P00558 417 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 SMPD1P17405 629 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 RGS2P41220 211 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 STX17P56962 302 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 ASIC1P78348 528 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 POSTNQ15063 836 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 LRRC41Q15345 812 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 MORN1Q5T089 497 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 L1TD1Q5T7N2 865 aaKnown RBP9.02□□□□□ -0.97
SMAD1-209ENST00000511125 ERMNQ8TAM6 284 aa9.02□□□□□ -0.97
SMAD1-209ENST00000511125 NAP1L4Q99733 375 aaKnown RBP9.02□□□□□ -0.97
SMAD1-209ENST00000511125 DDX41Q9UJV9 622 aaKnown RBP9.02□□□□□ -0.97
SMAD1-209ENST00000511125 RSPH10B2B2RC85 870 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 RSPH10BP0C881 870 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 TCF7P36402 384 aaPredicted RBP9.01□□□□□ -0.97
SMAD1-209ENST00000511125 BLOC1S4Q9NUP1 217 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 MYH15Q9Y2K3 1946 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 MYMKA6NI61 221 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 USO1O60763 962 aaKnown RBP9.01□□□□□ -0.97
SMAD1-209ENST00000511125 SLFN14P0C7P3 912 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 PLA2G4BP0C869 781 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 PDIA5Q14554 519 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 TTLL4Q14679 1199 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 MTERF2Q49AM1 385 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 OLFML2BQ68BL8 750 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 TAPT1Q6NXT6 567 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 PDXDC2PQ6P474 469 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 GPBP1Q86WP2 473 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 GLIS3Q8NEA6 775 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 LARP4BQ92615 738 aaKnown RBP9.01□□□□□ -0.97
SMAD1-209ENST00000511125 GPRASP2Q96D09 838 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 MPHOSPH6Q99547 160 aaKnown RBP9.01□□□□□ -0.97
SMAD1-209ENST00000511125 GPRC5CQ9NQ84 441 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 SEPT9Q9UHD8 586 aaPredicted RBP9.01□□□□□ -0.97
SMAD1-209ENST00000511125 DNM3Q9UQ16 869 aa9.01□□□□□ -0.97
SMAD1-209ENST00000511125 PTMSP20962 102 aa9□□□□□ -0.97
SMAD1-209ENST00000511125 CCND3P30281 292 aaPredicted RBP9□□□□□ -0.97
SMAD1-209ENST00000511125 COPB2P35606 906 aa9□□□□□ -0.97
SMAD1-209ENST00000511125 TNFAIP2Q03169 654 aa9□□□□□ -0.97
SMAD1-209ENST00000511125 E2F4Q16254 413 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms