RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 STAM2O75886 525 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 GTF2F1P35269 517 aaKnown RBP eCLIP11.96□□□□□ -0.49
MBD4-208ENST00000509828 PTPN5P54829 565 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 DLX2Q07687 328 aaPredicted RBP11.96□□□□□ -0.49
MBD4-208ENST00000509828 TRDNQ13061 729 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 COL19A1Q14993 1142 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 CTC1Q2NKJ3 1217 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 FAM26DQ5JW98 314 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 TAF2Q6P1X5 1199 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 NLRX1Q86UT6 975 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 TRIM50Q86XT4 487 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 SMARCC2Q8TAQ2 1214 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 LMBR1Q8WVP7 490 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 GPR20Q99678 358 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 PLVAPQ9BX97 442 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 OSBPL7Q9BZF2 842 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 LNPKQ9C0E8 428 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 BCAS3Q9H6U6 928 aa11.96□□□□□ -0.49
MBD4-208ENST00000509828 SPATA31C2B4DYI2 1134 aa11.95□□□□□ -0.5
MBD4-208ENST00000509828 M0QZ92 97 aa11.95□□□□□ -0.5
MBD4-208ENST00000509828 LINC01565O15544 149 aa11.95□□□□□ -0.5
MBD4-208ENST00000509828 FIBPO43427 364 aa11.95□□□□□ -0.5
MBD4-208ENST00000509828 PPP1R11O60927 126 aaPredicted RBP11.95□□□□□ -0.5
MBD4-208ENST00000509828 CHRNA1P02708 482 aa11.95□□□□□ -0.5
MBD4-208ENST00000509828 PPFIA1Q13136 1202 aa11.95□□□□□ -0.5
MBD4-208ENST00000509828 ADAM15Q13444 863 aa11.95□□□□□ -0.5
MBD4-208ENST00000509828 SPOUT1Q5T280 376 aaKnown RBP11.95□□□□□ -0.5
MBD4-208ENST00000509828 B4GALNT3Q6L9W6 998 aa11.95□□□□□ -0.5
MBD4-208ENST00000509828 TRIM67Q6ZTA4 783 aa11.95□□□□□ -0.5
MBD4-208ENST00000509828 RBM23Q86U06 439 aaKnown RBP11.95□□□□□ -0.5
MBD4-208ENST00000509828 GIMAP8Q8ND71 665 aaPredicted RBP11.95□□□□□ -0.5
MBD4-208ENST00000509828 GLG1Q92896 1179 aa11.95□□□□□ -0.5
MBD4-208ENST00000509828 LRFN2Q9ULH4 789 aa11.95□□□□□ -0.5
MBD4-208ENST00000509828 PLAGL2Q9UPG8 496 aa11.95□□□□□ -0.5
MBD4-208ENST00000509828 SUPT16HQ9Y5B9 1047 aaKnown RBP11.95□□□□□ -0.5
MBD4-208ENST00000509828 PNMA6FA0A0J9YX94 578 aa11.94□□□□□ -0.5
MBD4-208ENST00000509828 PPFIA3O75145 1194 aa11.94□□□□□ -0.5
MBD4-208ENST00000509828 MMP1P03956 469 aa11.94□□□□□ -0.5
MBD4-208ENST00000509828 STAG3L1P0CL83 205 aa11.94□□□□□ -0.5
MBD4-208ENST00000509828 HOXC8P31273 242 aa11.94□□□□□ -0.5
MBD4-208ENST00000509828 NRIP1P48552 1158 aa11.94□□□□□ -0.5
MBD4-208ENST00000509828 IGBP1P78318 339 aa11.94□□□□□ -0.5
MBD4-208ENST00000509828 GHRHRQ02643 423 aa11.94□□□□□ -0.5
MBD4-208ENST00000509828 LPIN1Q14693 890 aa11.94□□□□□ -0.5
MBD4-208ENST00000509828 PAN2Q504Q3 1202 aaKnown RBP11.94□□□□□ -0.5
MBD4-208ENST00000509828 ZBTB33Q86T24 672 aa11.94□□□□□ -0.5
MBD4-208ENST00000509828 DNAJB3Q8WWF6 145 aa11.94□□□□□ -0.5
MBD4-208ENST00000509828 RPGRIP1Q96KN7 1286 aa11.94□□□□□ -0.5
MBD4-208ENST00000509828 SNX27Q96L92 541 aa11.94□□□□□ -0.5
MBD4-208ENST00000509828 FAM49AQ9H0Q0 323 aaPredicted RBP11.94□□□□□ -0.5
MBD4-208ENST00000509828 MAD2L2Q9UI95 211 aa11.94□□□□□ -0.5
MBD4-208ENST00000509828 PALM3A6NDB9 673 aaPredicted RBP11.93□□□□□ -0.5
MBD4-208ENST00000509828 IFIT3O14879 490 aaKnown RBP11.93□□□□□ -0.5
MBD4-208ENST00000509828 ST18O60284 1047 aa11.93□□□□□ -0.5
MBD4-208ENST00000509828 TBX10O75333 385 aa11.93□□□□□ -0.5
MBD4-208ENST00000509828 MARK3P27448 753 aa11.93□□□□□ -0.5
MBD4-208ENST00000509828 ICAM3P32942 547 aa11.93□□□□□ -0.5
MBD4-208ENST00000509828 TCF7P36402 384 aaPredicted RBP11.93□□□□□ -0.5
MBD4-208ENST00000509828 SART3Q15020 963 aaKnown RBP11.93□□□□□ -0.5
MBD4-208ENST00000509828 NAALADL2Q58DX5 795 aa11.93□□□□□ -0.5
MBD4-208ENST00000509828 IER5Q5VY09 327 aa11.93□□□□□ -0.5
MBD4-208ENST00000509828 RUFY4Q6ZNE9 571 aa11.93□□□□□ -0.5
MBD4-208ENST00000509828 BMP8AQ7Z5Y6 402 aa11.93□□□□□ -0.5
MBD4-208ENST00000509828 EFHBQ8N7U6 833 aa11.93□□□□□ -0.5
MBD4-208ENST00000509828 TNPO1Q92973 898 aaKnown RBP11.93□□□□□ -0.5
MBD4-208ENST00000509828 CLP1Q92989 425 aaKnown RBP11.93□□□□□ -0.5
MBD4-208ENST00000509828 MTMR8Q96EF0 704 aa11.93□□□□□ -0.5
MBD4-208ENST00000509828 INPP4AQ96PE3 977 aaPredicted RBP11.93□□□□□ -0.5
MBD4-208ENST00000509828 PHOX2BQ99453 314 aa11.93□□□□□ -0.5
MBD4-208ENST00000509828 DSCC1Q9BVC3 393 aa11.93□□□□□ -0.5
MBD4-208ENST00000509828 TLE6Q9H808 572 aa11.93□□□□□ -0.5
MBD4-208ENST00000509828 TUBE1Q9UJT0 475 aa11.93□□□□□ -0.5
MBD4-208ENST00000509828 CDY2AQ9Y6F7 541 aa11.93□□□□□ -0.5
MBD4-208ENST00000509828 KIAA1217Q5T5P2 1943 aa11.93□□□□□ -0.5
MBD4-208ENST00000509828 MYH7BA7E2Y1 1941 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 DGKIO75912 1065 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 RPLP2P05387 115 aaKnown RBP11.92□□□□□ -0.5
MBD4-208ENST00000509828 CD52P31358 61 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 RRP1P56182 461 aaKnown RBP11.92□□□□□ -0.5
MBD4-208ENST00000509828 MRPS9P82933 396 aaKnown RBP11.92□□□□□ -0.5
MBD4-208ENST00000509828 ZXDAP98168 799 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 GRM4Q14833 912 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 GRIK4Q16099 956 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 IER5LQ5T953 404 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 XRRA1Q6P2D8 792 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 TSHZ1Q6ZSZ6 1077 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 CATIPQ7Z7H3 387 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 RALYLQ86SE5 291 aaKnown RBP11.92□□□□□ -0.5
MBD4-208ENST00000509828 CMTR2Q8IYT2 770 aaKnown RBP11.92□□□□□ -0.5
MBD4-208ENST00000509828 FBXL6Q8N531 539 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 KLHL23Q8NBE8 558 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 PRSS33Q8NF86 280 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 POF1BQ8WVV4 589 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 SEPT1Q8WYJ6 367 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 ATOH1Q92858 354 aaPredicted RBP11.92□□□□□ -0.5
MBD4-208ENST00000509828 P2RX5Q93086 422 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 SENP7Q9BQF6 1050 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 FTHL17Q9BXU8 183 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 IRF2BPLQ9H1B7 796 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 RWDD1Q9H446 243 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms