RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 CHD7Q9P2D1 2997 aa17.64■□□□□ 0.41
TPM3-219ENST00000509409 GBF1Q92538 1859 aa17.64■□□□□ 0.41
TPM3-219ENST00000509409 ZBTB43O43298 467 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 CAND2O75155 1236 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 KCNA2P16389 499 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 ITGB5P18084 799 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 MARK3P27448 753 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 NAPAP54920 295 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 FGD1P98174 961 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 EXOSC10Q01780 885 aaKnown RBP17.63■□□□□ 0.41
TPM3-219ENST00000509409 RTN1Q16799 776 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 AAK1Q2M2I8 961 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 PLEKHG4Q58EX7 1191 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 APOA5Q6Q788 366 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 ADAMTS19Q8TE59 1207 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 GLG1Q92896 1179 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 UHRF1Q96T88 793 aaPredicted RBP17.63■□□□□ 0.41
TPM3-219ENST00000509409 RNF39Q9H2S5 420 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 JADE2Q9NQC1 790 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 INSL6Q9Y581 213 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 UBIAD1Q9Y5Z9 338 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 V9GY48 417 aaPredicted RBP17.63■□□□□ 0.41
TPM3-219ENST00000509409 NRCAMQ92823 1304 aa17.63■□□□□ 0.41
TPM3-219ENST00000509409 MAFGO15525 162 aa17.62■□□□□ 0.41
TPM3-219ENST00000509409 CDC45O75419 566 aa17.62■□□□□ 0.41
TPM3-219ENST00000509409 UPP2O95045 317 aa17.62■□□□□ 0.41
TPM3-219ENST00000509409 TFF2Q03403 129 aa17.62■□□□□ 0.41
TPM3-219ENST00000509409 KRT32Q14532 448 aa17.62■□□□□ 0.41
TPM3-219ENST00000509409 WWC2Q6AWC2 1192 aa17.62■□□□□ 0.41
TPM3-219ENST00000509409 GDPD5Q8WTR4 605 aa17.62■□□□□ 0.41
TPM3-219ENST00000509409 LMBR1Q8WVP7 490 aa17.62■□□□□ 0.41
TPM3-219ENST00000509409 TANC1Q9C0D5 1861 aa17.62■□□□□ 0.41
TPM3-219ENST00000509409 GSTTP1A0A1W2PQM5 241 aa17.61■□□□□ 0.41
TPM3-219ENST00000509409 LINC01553A4QN01 128 aa17.61■□□□□ 0.41
TPM3-219ENST00000509409 GOLGA8AA7E2F4 631 aa17.61■□□□□ 0.41
TPM3-219ENST00000509409 GOLGA8BA8MQT2 603 aa17.61■□□□□ 0.41
TPM3-219ENST00000509409 ERVK-21P61565 698 aa17.61■□□□□ 0.41
TPM3-219ENST00000509409 PPFIA1Q13136 1202 aa17.61■□□□□ 0.41
TPM3-219ENST00000509409 ADCK5Q3MIX3 580 aa17.61■□□□□ 0.41
TPM3-219ENST00000509409 RSPH3Q86UC2 560 aa17.61■□□□□ 0.41
TPM3-219ENST00000509409 RASEFQ8IZ41 740 aa17.61■□□□□ 0.41
TPM3-219ENST00000509409 SMARCAD1Q9H4L7 1026 aa17.61■□□□□ 0.41
TPM3-219ENST00000509409 ERAP1Q9NZ08 941 aa17.61■□□□□ 0.41
TPM3-219ENST00000509409 BRPF3Q9ULD4 1205 aa17.61■□□□□ 0.41
TPM3-219ENST00000509409 COG5Q9UP83 839 aa17.61■□□□□ 0.41
TPM3-219ENST00000509409 SPTBN5Q9NRC6 3674 aaKnown RBP17.61■□□□□ 0.41
TPM3-219ENST00000509409 KLF18A0A0U1RQI7 1052 aa17.6■□□□□ 0.41
TPM3-219ENST00000509409 SMCO2A6NFE2 343 aa17.6■□□□□ 0.41
TPM3-219ENST00000509409 ADCY7P51828 1080 aa17.6■□□□□ 0.41
TPM3-219ENST00000509409 IGBP1P78318 339 aa17.6■□□□□ 0.41
TPM3-219ENST00000509409 TSGA10IPQ3SY00 556 aa17.6■□□□□ 0.41
TPM3-219ENST00000509409 PGBD1Q96JS3 809 aa17.6■□□□□ 0.41
TPM3-219ENST00000509409 YME1L1Q96TA2 773 aa17.6■□□□□ 0.41
TPM3-219ENST00000509409 MXRA8Q9BRK3 442 aa17.6■□□□□ 0.41
TPM3-219ENST00000509409 OSBPL7Q9BZF2 842 aa17.6■□□□□ 0.41
TPM3-219ENST00000509409 SUGCTQ9HAC7 445 aa17.6■□□□□ 0.41
TPM3-219ENST00000509409 RIC8AQ9NPQ8 531 aa17.6■□□□□ 0.41
TPM3-219ENST00000509409 LMCD1Q9NZU5 365 aa17.6■□□□□ 0.41
TPM3-219ENST00000509409 CNTNAP5Q8WYK1 1306 aa17.59■□□□□ 0.41
TPM3-219ENST00000509409 LPXNO60711 386 aa17.59■□□□□ 0.41
TPM3-219ENST00000509409 FOSP01100 380 aaPredicted RBP17.59■□□□□ 0.41
TPM3-219ENST00000509409 HMGB1P09429 215 aaKnown RBP17.59■□□□□ 0.41
TPM3-219ENST00000509409 ZNF76P36508 570 aa17.59■□□□□ 0.41
TPM3-219ENST00000509409 ADAM17P78536 824 aa17.59■□□□□ 0.41
TPM3-219ENST00000509409 GRIK4Q16099 956 aa17.59■□□□□ 0.41
TPM3-219ENST00000509409 FAM26DQ5JW98 314 aa17.59■□□□□ 0.41
TPM3-219ENST00000509409 TAF2Q6P1X5 1199 aa17.59■□□□□ 0.41
TPM3-219ENST00000509409 RUFY4Q6ZNE9 571 aa17.59■□□□□ 0.41
TPM3-219ENST00000509409 FBXO22Q8NEZ5 403 aa17.59■□□□□ 0.41
TPM3-219ENST00000509409 APBB2Q92870 758 aa17.59■□□□□ 0.41
TPM3-219ENST00000509409 HLA-CQ95604 372 aa17.59■□□□□ 0.41
TPM3-219ENST00000509409 TOP1MTQ969P6 601 aa17.59■□□□□ 0.41
TPM3-219ENST00000509409 SDF4Q9BRK5 362 aa17.59■□□□□ 0.41
TPM3-219ENST00000509409 IFIH1Q9BYX4 1025 aaKnown RBP17.59■□□□□ 0.41
TPM3-219ENST00000509409 AZI2Q9H6S1 392 aa17.59■□□□□ 0.41
TPM3-219ENST00000509409 JPH1Q9HDC5 661 aaPredicted RBP17.59■□□□□ 0.41
TPM3-219ENST00000509409 SLC9A2Q9UBY0 812 aa17.59■□□□□ 0.41
TPM3-219ENST00000509409 GHRP10912 638 aa17.58■□□□□ 0.4
TPM3-219ENST00000509409 BMP1P13497 986 aa17.58■□□□□ 0.4
TPM3-219ENST00000509409 PPP1R18Q6NYC8 613 aa17.58■□□□□ 0.4
TPM3-219ENST00000509409 CYP2W1Q8TAV3 490 aa17.58■□□□□ 0.4
TPM3-219ENST00000509409 TNPO1Q92973 898 aaKnown RBP17.58■□□□□ 0.4
TPM3-219ENST00000509409 C17orf80Q9BSJ5 609 aa17.58■□□□□ 0.4
TPM3-219ENST00000509409 GLT8D2Q9H1C3 349 aa17.58■□□□□ 0.4
TPM3-219ENST00000509409 KCNH7Q9NS40 1196 aa17.58■□□□□ 0.4
TPM3-219ENST00000509409 PRRC2BQ5JSZ5 2229 aaKnown RBP17.57■□□□□ 0.4
TPM3-219ENST00000509409 RRN3P2A6NIE6 340 aa17.57■□□□□ 0.4
TPM3-219ENST00000509409 STXBP3O00186 592 aa17.57■□□□□ 0.4
TPM3-219ENST00000509409 CHRNA1P02708 482 aa17.57■□□□□ 0.4
TPM3-219ENST00000509409 KCNQ1P51787 676 aa17.57■□□□□ 0.4
TPM3-219ENST00000509409 HTRA4P83105 476 aaPredicted RBP17.57■□□□□ 0.4
TPM3-219ENST00000509409 FUT2Q10981 343 aa17.57■□□□□ 0.4
TPM3-219ENST00000509409 TYW1BQ6NUM6 668 aa17.57■□□□□ 0.4
TPM3-219ENST00000509409 DNAJB3Q8WWF6 145 aa17.57■□□□□ 0.4
TPM3-219ENST00000509409 ANO3Q9BYT9 981 aa17.57■□□□□ 0.4
TPM3-219ENST00000509409 TMEM260Q9NX78 707 aa17.57■□□□□ 0.4
TPM3-219ENST00000509409 BARHL2Q9NY43 387 aa17.57■□□□□ 0.4
TPM3-219ENST00000509409 TUBE1Q9UJT0 475 aa17.57■□□□□ 0.4
TPM3-219ENST00000509409 TRPC6Q9Y210 931 aa17.57■□□□□ 0.4
TPM3-219ENST00000509409 TTC28Q96AY4 2481 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms