RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 CARMIL2Q6F5E8 1435 aa8.3□□□□□ -1.08
GYPB-210ENST00000508841 TARBP2Q15633 366 aaKnown RBP8.3□□□□□ -1.08
GYPB-210ENST00000508841 ETV3LQ6ZN32 361 aa8.3□□□□□ -1.08
GYPB-210ENST00000508841 C11orf74Q86VG3 221 aa8.3□□□□□ -1.08
GYPB-210ENST00000508841 PASD1Q8IV76 773 aa8.3□□□□□ -1.08
GYPB-210ENST00000508841 NOSTRINQ8IVI9 506 aa8.3□□□□□ -1.08
GYPB-210ENST00000508841 FAM126BQ8IXS8 530 aa8.3□□□□□ -1.08
GYPB-210ENST00000508841 POU5F2Q8N7G0 328 aa8.3□□□□□ -1.08
GYPB-210ENST00000508841 UBR7Q8N806 425 aa8.3□□□□□ -1.08
GYPB-210ENST00000508841 LIN37Q96GY3 246 aaPredicted RBP8.3□□□□□ -1.08
GYPB-210ENST00000508841 NSUN3Q9H649 340 aaKnown RBP8.3□□□□□ -1.08
GYPB-210ENST00000508841 RXFP1Q9HBX9 757 aa8.3□□□□□ -1.08
GYPB-210ENST00000508841 PCDH18Q9HCL0 1135 aa8.3□□□□□ -1.08
GYPB-210ENST00000508841 KCNH7Q9NS40 1196 aa8.3□□□□□ -1.08
GYPB-210ENST00000508841 ATP8A1Q9Y2Q0 1164 aa8.3□□□□□ -1.08
GYPB-210ENST00000508841 SEMA7AO75326 666 aa8.29□□□□□ -1.08
GYPB-210ENST00000508841 BPIP17213 487 aa8.29□□□□□ -1.08
GYPB-210ENST00000508841 VIPR1P32241 457 aa8.29□□□□□ -1.08
GYPB-210ENST00000508841 LSSP48449 732 aa8.29□□□□□ -1.08
GYPB-210ENST00000508841 KPNA1P52294 538 aaPredicted RBP8.29□□□□□ -1.08
GYPB-210ENST00000508841 IL2P60568 153 aa8.29□□□□□ -1.08
GYPB-210ENST00000508841 SRSF3P84103 164 aaKnown RBP8.29□□□□□ -1.08
GYPB-210ENST00000508841 AMPD3Q01432 767 aa8.29□□□□□ -1.08
GYPB-210ENST00000508841 LCE4AQ5TA78 99 aa8.29□□□□□ -1.08
GYPB-210ENST00000508841 ZC3H18Q86VM9 953 aaKnown RBP8.29□□□□□ -1.08
GYPB-210ENST00000508841 EFHBQ8N7U6 833 aa8.29□□□□□ -1.08
GYPB-210ENST00000508841 SMC1BQ8NDV3 1235 aa8.29□□□□□ -1.08
GYPB-210ENST00000508841 CPA5Q8WXQ8 436 aa8.29□□□□□ -1.08
GYPB-210ENST00000508841 DDX11Q96FC9 970 aa8.29□□□□□ -1.08
GYPB-210ENST00000508841 GPATCH3Q96I76 525 aa8.29□□□□□ -1.08
GYPB-210ENST00000508841 PUS7Q96PZ0 661 aaKnown RBP8.29□□□□□ -1.08
GYPB-210ENST00000508841 DTLQ9NZJ0 730 aa8.29□□□□□ -1.08
GYPB-210ENST00000508841 HSPBP1Q9NZL4 362 aa8.29□□□□□ -1.08
GYPB-210ENST00000508841 TEX51A0A1B0GUA7 166 aa8.28□□□□□ -1.08
GYPB-210ENST00000508841 LRRC10BA6NIK2 292 aa8.28□□□□□ -1.08
GYPB-210ENST00000508841 NCAM1P13591 858 aa8.28□□□□□ -1.08
GYPB-210ENST00000508841 PFKLP17858 780 aa8.28□□□□□ -1.08
GYPB-210ENST00000508841 PTPN1P18031 435 aaKnown RBP8.28□□□□□ -1.08
GYPB-210ENST00000508841 STRN3Q13033 797 aa8.28□□□□□ -1.08
GYPB-210ENST00000508841 BTBD8Q5XKL5 378 aa8.28□□□□□ -1.08
GYPB-210ENST00000508841 FBXO15Q8NCQ5 510 aaPredicted RBP8.28□□□□□ -1.08
GYPB-210ENST00000508841 ATL2Q8NHH9 583 aa8.28□□□□□ -1.08
GYPB-210ENST00000508841 TOE1Q96GM8 510 aaKnown RBP8.28□□□□□ -1.08
GYPB-210ENST00000508841 CD244Q9BZW8 370 aa8.28□□□□□ -1.08
GYPB-210ENST00000508841 PCIF1Q9H4Z3 704 aa8.28□□□□□ -1.08
GYPB-210ENST00000508841 ACSS2Q9NR19 701 aa8.28□□□□□ -1.08
GYPB-210ENST00000508841 B3GALT1Q9Y5Z6 326 aa8.28□□□□□ -1.08
GYPB-210ENST00000508841 ZNF891A8MT65 544 aaPredicted RBP8.27□□□□□ -1.09
GYPB-210ENST00000508841 ZBTB48P10074 688 aaPredicted RBP8.27□□□□□ -1.09
GYPB-210ENST00000508841 PMLP29590 882 aa8.27□□□□□ -1.09
GYPB-210ENST00000508841 HERVK_113P62684 666 aa8.27□□□□□ -1.09
GYPB-210ENST00000508841 ZNF200P98182 395 aaPredicted RBP8.27□□□□□ -1.09
GYPB-210ENST00000508841 RNF219Q5W0B1 726 aaPredicted RBP8.27□□□□□ -1.09
GYPB-210ENST00000508841 TMEM132EQ6IEE7 984 aa8.27□□□□□ -1.09
GYPB-210ENST00000508841 CC2D1AQ6P1N0 951 aaPredicted RBP8.27□□□□□ -1.09
GYPB-210ENST00000508841 NXPE1Q8N323 547 aa8.27□□□□□ -1.09
GYPB-210ENST00000508841 ARRDC4Q8NCT1 418 aa8.27□□□□□ -1.09
GYPB-210ENST00000508841 DLG3Q92796 817 aa8.27□□□□□ -1.09
GYPB-210ENST00000508841 DIRC2Q96SL1 478 aa8.27□□□□□ -1.09
GYPB-210ENST00000508841 RIC8BQ9NVN3 520 aa8.27□□□□□ -1.09
GYPB-210ENST00000508841 ALG1L2C9J202 215 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 SCDO00767 359 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 ULK1O75385 1050 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 FKBP9O95302 570 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 EYA4O95677 639 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 CYP17A1P05093 508 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 ATP2A2P16615 1042 aaKnown RBP8.26□□□□□ -1.09
GYPB-210ENST00000508841 FAHP16930 419 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 SDHAP31040 664 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 NKX3-2P78367 333 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 FAPQ12884 760 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 MLANAQ16655 118 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 PAN2Q504Q3 1202 aaKnown RBP8.26□□□□□ -1.09
GYPB-210ENST00000508841 PRR23BQ6ZRT6 265 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 FKBP9P1Q75LS8 142 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 ZZZ3Q8IYH5 903 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 CLEC4DQ8WXI8 215 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 THG1LQ9NWX6 298 aaKnown RBP8.26□□□□□ -1.09
GYPB-210ENST00000508841 SPO11Q9Y5K1 396 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.26□□□□□ -1.09
GYPB-210ENST00000508841 IRS2Q9Y4H2 1338 aa8.26□□□□□ -1.09
GYPB-210ENST00000508841 BUB1BO60566 1050 aaPredicted RBP8.25□□□□□ -1.09
GYPB-210ENST00000508841 KRT37O76014 449 aa8.25□□□□□ -1.09
GYPB-210ENST00000508841 ADCYAP1R1P41586 468 aa8.25□□□□□ -1.09
GYPB-210ENST00000508841 FNTBP49356 437 aa8.25□□□□□ -1.09
GYPB-210ENST00000508841 CACNB2Q08289 660 aaPredicted RBP8.25□□□□□ -1.09
GYPB-210ENST00000508841 NECAB2Q7Z6G3 386 aa8.25□□□□□ -1.09
GYPB-210ENST00000508841 STRA8Q7Z7C7 330 aa8.25□□□□□ -1.09
GYPB-210ENST00000508841 DDX42Q86XP3 938 aaKnown RBP eCLIP8.25□□□□□ -1.09
GYPB-210ENST00000508841 WDR66Q8TBY9 1149 aa8.25□□□□□ -1.09
GYPB-210ENST00000508841 CHTF18Q8WVB6 975 aa8.25□□□□□ -1.09
GYPB-210ENST00000508841 OXSMQ9NWU1 459 aa8.25□□□□□ -1.09
GYPB-210ENST00000508841 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.25□□□□□ -1.09
GYPB-210ENST00000508841 TELO2Q9Y4R8 837 aa8.25□□□□□ -1.09
GYPB-210ENST00000508841 HCFC2Q9Y5Z7 792 aa8.25□□□□□ -1.09
GYPB-210ENST00000508841 ASGR2P07307 311 aa8.24□□□□□ -1.09
GYPB-210ENST00000508841 HMGB1P09429 215 aaKnown RBP8.24□□□□□ -1.09
GYPB-210ENST00000508841 POU3F3P20264 500 aaPredicted RBP8.24□□□□□ -1.09
GYPB-210ENST00000508841 CDK11BP21127 795 aaKnown RBP8.24□□□□□ -1.09
GYPB-210ENST00000508841 FBLN1P23142 703 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms