RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 PPP1R9BQ96SB3 815 aa9.13□□□□□ -0.95
CCSER1-207ENST00000508550 OXCT2Q9BYC2 517 aaPredicted RBP9.13□□□□□ -0.95
CCSER1-207ENST00000508550 GOLPH3LQ9H4A5 285 aa9.13□□□□□ -0.95
CCSER1-207ENST00000508550 EHMT1Q9H9B1 1298 aa9.13□□□□□ -0.95
CCSER1-207ENST00000508550 GPAMQ9HCL2 828 aa9.13□□□□□ -0.95
CCSER1-207ENST00000508550 PICK1Q9NRD5 415 aa9.13□□□□□ -0.95
CCSER1-207ENST00000508550 PHF24Q9UPV7 400 aa9.13□□□□□ -0.95
CCSER1-207ENST00000508550 FRMPD2Q68DX3 1309 aaPredicted RBP9.12□□□□□ -0.95
CCSER1-207ENST00000508550 A0A1B0GVL5 298 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 GLTPD2A6NH11 291 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 PPP1R12BO60237 982 aaPredicted RBP9.12□□□□□ -0.95
CCSER1-207ENST00000508550 NEMFO60524 1076 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 DTNBO60941 627 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 PRKCSHP14314 528 aaPredicted RBP9.12□□□□□ -0.95
CCSER1-207ENST00000508550 VEGFAP15692 232 aaPredicted RBP9.12□□□□□ -0.95
CCSER1-207ENST00000508550 MUTP22033 750 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 MARCKSP29966 332 aaPredicted RBP9.12□□□□□ -0.95
CCSER1-207ENST00000508550 SARSP49591 514 aaKnown RBP9.12□□□□□ -0.95
CCSER1-207ENST00000508550 DHX8Q14562 1220 aaKnown RBP9.12□□□□□ -0.95
CCSER1-207ENST00000508550 TKFCQ3LXA3 575 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 Q4G0T1 1027 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 TBC1D10BQ4KMP7 808 aaPredicted RBP9.12□□□□□ -0.95
CCSER1-207ENST00000508550 EARS2Q5JPH6 523 aaKnown RBP9.12□□□□□ -0.95
CCSER1-207ENST00000508550 KCTD1Q719H9 257 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 HOMER1Q86YM7 354 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 SLFN12Q8IYM2 578 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 IGSF22Q8N9C0 903 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 ZNF280CQ8ND82 737 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 CNNM3Q8NE01 707 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 TBCKQ8TEA7 893 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 DCPSQ96C86 337 aaKnown RBP9.12□□□□□ -0.95
CCSER1-207ENST00000508550 PDLIM2Q96JY6 352 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 GSDMAQ96QA5 445 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 LRRC27Q9C0I9 530 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 VAT1LQ9HCJ6 419 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 PRR12Q9ULL5 1215 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 ECM29Q5VYK3 1845 aa9.12□□□□□ -0.95
CCSER1-207ENST00000508550 UTRNP46939 3433 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 hCG_1642624A0A1W2PR95 340 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 MEIS2O14770 477 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 IKBKBO14920 756 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 PPP1R11O60927 126 aaPredicted RBP9.11□□□□□ -0.95
CCSER1-207ENST00000508550 SMC2O95347 1197 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 STAU1O95793 577 aaKnown RBP9.11□□□□□ -0.95
CCSER1-207ENST00000508550 ICAM1P05362 532 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 OR52Z1P0C646 297 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 PTPRAP18433 802 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 SREBF1P36956 1147 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 PPP1R2P41236 205 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 JAG1P78504 1218 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 VAC14Q08AM6 782 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 ZNF174Q15697 407 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 TMEM266Q2M3C6 531 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 ANGEL2Q5VTE6 544 aaKnown RBP9.11□□□□□ -0.95
CCSER1-207ENST00000508550 TTBK2Q6IQ55 1244 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 XRRA1Q6P2D8 792 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 CNNM4Q6P4Q7 775 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 MIGA2Q7L4E1 593 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 CEP57L1Q8IYX8 460 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCSER1-207ENST00000508550 FAM20AQ96MK3 541 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 SLF1Q9BQI6 1058 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 CSRNP2Q9H175 543 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 RBSNQ9H1K0 784 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 CRISPLD1Q9H336 500 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 SLC38A10Q9HBR0 1119 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 NDFIP2Q9NV92 336 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 HOXC10Q9NYD6 342 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 RNF181Q9P0P0 153 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 CCDC39Q9UFE4 941 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 ADAMTS5Q9UNA0 930 aa9.11□□□□□ -0.95
CCSER1-207ENST00000508550 SIPA1L1O43166 1804 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 SPDYE3A6NKU9 549 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 FAM196BA6NMK8 535 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 SMTNL1A8MU46 457 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 CXCL11O14625 94 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 CCNT1O60563 726 aaKnown RBP9.1□□□□□ -0.95
CCSER1-207ENST00000508550 EGFRP00533 1210 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 INHAP05111 366 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 NF2P35240 595 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 EPS15P42566 896 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 ECE1P42892 770 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 HIRAP54198 1017 aaPredicted RBP9.1□□□□□ -0.95
CCSER1-207ENST00000508550 NLRP12P59046 1061 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 FKBP1BP68106 108 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 AMPD3Q01432 767 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 INF2Q27J81 1249 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 HYIQ5T013 277 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 NBPF12Q5TAG4 269 aaPredicted RBP9.1□□□□□ -0.95
CCSER1-207ENST00000508550 C9orf131Q5VYM1 1079 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 SARM1Q6SZW1 724 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 NIPA1Q7RTP0 329 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 PGBD3Q8N328 593 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 MB21D1Q8N884 522 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 MLKLQ8NB16 471 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 TRPM4Q8TD43 1214 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 ACER1Q8TDN7 264 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 COA7Q96BR5 231 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 RMND1Q9NWS8 449 aa9.1□□□□□ -0.95
CCSER1-207ENST00000508550 GGA3Q9NZ52 723 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms