RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 TMEM260Q9NX78 707 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 CNOT8Q9UFF9 292 aaKnown RBP13.91□□□□□ -0.18
DDR1-262ENST00000508312 RTCBQ9Y3I0 505 aaKnown RBP13.91□□□□□ -0.18
DDR1-262ENST00000508312 ANKRD36CQ5JPF3 1778 aa13.91□□□□□ -0.18
DDR1-262ENST00000508312 LTBP4Q8N2S1 1624 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 CHD4Q14839 1912 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 A0A1W2PQC6 194 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 TM4SF1P30408 202 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 KCNV2Q8TDN2 545 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 ZNF570Q96NI8 536 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 TLR10Q9BXR5 811 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 MMRN2Q9H8L6 949 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 GDF3Q9NR23 364 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 PANK4Q9NVE7 773 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 DDX60Q8IY21 1712 aaKnown RBP13.9□□□□□ -0.18
DDR1-262ENST00000508312 COL16A1Q07092 1604 aaPredicted RBP13.9□□□□□ -0.18
DDR1-262ENST00000508312 SMIM23A6NLE4 172 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 PSMA7O14818 248 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 GTPBP6O43824 516 aaPredicted RBP13.9□□□□□ -0.18
DDR1-262ENST00000508312 DNAJC8O75937 253 aaPredicted RBP13.9□□□□□ -0.18
DDR1-262ENST00000508312 UFL1O94874 794 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 ICA1Q05084 483 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 CDCA2Q69YH5 1023 aaPredicted RBP13.9□□□□□ -0.18
DDR1-262ENST00000508312 RUFY4Q6ZNE9 571 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 BLIDQ8IZY5 108 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 LRRC47Q8N1G4 583 aaKnown RBP13.9□□□□□ -0.18
DDR1-262ENST00000508312 PRCCQ92733 491 aaPredicted RBP13.9□□□□□ -0.18
DDR1-262ENST00000508312 NOX5Q96PH1 765 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 KANSL2Q9H9L4 492 aa13.9□□□□□ -0.18
DDR1-262ENST00000508312 BIN2Q9UBW5 565 aaPredicted RBP13.9□□□□□ -0.18
DDR1-262ENST00000508312 CCT8L1PA6NM43 557 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 FAM196BA6NMK8 535 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 RAD51CO43502 376 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 ATP2C1P98194 919 aaPredicted RBP13.89□□□□□ -0.19
DDR1-262ENST00000508312 BYSLQ13895 437 aaKnown RBP13.89□□□□□ -0.19
DDR1-262ENST00000508312 PFKFB3Q16875 520 aaPredicted RBP13.89□□□□□ -0.19
DDR1-262ENST00000508312 MIS18BP1Q6P0N0 1132 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 ZNF219Q9P2Y4 722 aaPredicted RBP13.89□□□□□ -0.19
DDR1-262ENST00000508312 SLC12A6Q9UHW9 1150 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 SALL4Q9UJQ4 1053 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 PDS5AQ29RF7 1337 aaKnown RBP13.89□□□□□ -0.19
DDR1-262ENST00000508312 FCER1AP12319 257 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 PECAM1P16284 738 aaPredicted RBP13.89□□□□□ -0.19
DDR1-262ENST00000508312 EEF1GP26641 437 aaKnown RBP13.89□□□□□ -0.19
DDR1-262ENST00000508312 EHHADHQ08426 723 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 SHROOM1Q2M3G4 852 aaPredicted RBP13.89□□□□□ -0.19
DDR1-262ENST00000508312 CD302Q8IX05 232 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 ZNF444Q8N0Y2 327 aaPredicted RBP13.89□□□□□ -0.19
DDR1-262ENST00000508312 ZNF507Q8TCN5 953 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 FERMT2Q96AC1 680 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 MTMR8Q96EF0 704 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 TMEM47Q9BQJ4 181 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 EBF2Q9HAK2 575 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 SRGNP10124 158 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 TAL1P17542 331 aaPredicted RBP13.89□□□□□ -0.19
DDR1-262ENST00000508312 TNFRSF8P28908 595 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 GFPT1Q06210 699 aaPredicted RBP13.89□□□□□ -0.19
DDR1-262ENST00000508312 CACNA1SQ13698 1873 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 ZNF662Q6ZS27 426 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 RRAGAQ7L523 313 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 DYMQ7RTS9 669 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 KDM4CQ9H3R0 1056 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 ARHGAP20Q9P2F6 1191 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 NARFQ9UHQ1 456 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 LRP5O75197 1615 aa13.89□□□□□ -0.19
DDR1-262ENST00000508312 SMIM24O75264 130 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 VIMP08670 466 aaKnown RBP13.88□□□□□ -0.19
DDR1-262ENST00000508312 PRLRP16471 622 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 TECP42680 631 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 BTDP43251 543 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 RBM5P52756 815 aaKnown RBP eCLIP13.88□□□□□ -0.19
DDR1-262ENST00000508312 ZNF844Q08AG5 666 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 LACTB2Q53H82 288 aaPredicted RBP13.88□□□□□ -0.19
DDR1-262ENST00000508312 PDXDC2PQ6P474 469 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 CLEC4GQ6UXB4 293 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 CHMP6Q96FZ7 201 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 MAD2L2Q9UI95 211 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 TLDC2A0PJX2 215 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 C6orf229H3BNL8 230 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 EVI5O60447 810 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 CCNT1O60563 726 aaKnown RBP13.88□□□□□ -0.19
DDR1-262ENST00000508312 SMNDC1O75940 238 aaKnown RBP eCLIP13.88□□□□□ -0.19
DDR1-262ENST00000508312 GPSM2P81274 684 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 C12orf60Q5U649 245 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 CHADLQ6NUI6 762 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 SLC30A9Q6PML9 568 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 DTHD1Q6ZMT9 781 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 SPICE1Q8N0Z3 855 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 C3orf20Q8ND61 904 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 COA7Q96BR5 231 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 ELAC2Q9BQ52 826 aaKnown RBP13.88□□□□□ -0.19
DDR1-262ENST00000508312 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.88□□□□□ -0.19
DDR1-262ENST00000508312 CD2APQ9Y5K6 639 aa13.88□□□□□ -0.19
DDR1-262ENST00000508312 NEFHP12036 1026 aa13.87□□□□□ -0.19
DDR1-262ENST00000508312 SCNN1DP51172 638 aa13.87□□□□□ -0.19
DDR1-262ENST00000508312 CACNB3P54284 484 aa13.87□□□□□ -0.19
DDR1-262ENST00000508312 ASIC1P78348 528 aa13.87□□□□□ -0.19
DDR1-262ENST00000508312 KIF2BQ8N4N8 673 aa13.87□□□□□ -0.19
DDR1-262ENST00000508312 LRRC45Q96CN5 670 aa13.87□□□□□ -0.19
DDR1-262ENST00000508312 CNOT6LQ96LI5 555 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms