RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 MFAP1P55081 439 aaKnown RBP7.16□□□□□ -1.26
TRAPPC13-209ENST00000508304 TGFB2P61812 414 aa7.16□□□□□ -1.26
TRAPPC13-209ENST00000508304 MAP4K2Q12851 820 aa7.16□□□□□ -1.26
TRAPPC13-209ENST00000508304 SKIDA1Q1XH10 827 aa7.16□□□□□ -1.26
TRAPPC13-209ENST00000508304 LARP1BQ659C4 914 aaKnown RBP7.16□□□□□ -1.26
TRAPPC13-209ENST00000508304 IGFL4Q6B9Z1 124 aa7.16□□□□□ -1.26
TRAPPC13-209ENST00000508304 IFNL2Q8IZJ0 200 aa7.16□□□□□ -1.26
TRAPPC13-209ENST00000508304 GPR27Q9NS67 375 aa7.16□□□□□ -1.26
TRAPPC13-209ENST00000508304 PPARGC1AQ9UBK2 798 aaKnown RBP7.16□□□□□ -1.26
TRAPPC13-209ENST00000508304 MSCO60682 206 aa7.15□□□□□ -1.26
TRAPPC13-209ENST00000508304 GRIA2P42262 883 aa7.15□□□□□ -1.26
TRAPPC13-209ENST00000508304 PAN2Q504Q3 1202 aaKnown RBP7.15□□□□□ -1.26
TRAPPC13-209ENST00000508304 OTOP3Q7RTS5 596 aa7.15□□□□□ -1.26
TRAPPC13-209ENST00000508304 TAX1BP1Q86VP1 789 aa7.15□□□□□ -1.26
TRAPPC13-209ENST00000508304 STPG3Q8N7X2 389 aa7.15□□□□□ -1.26
TRAPPC13-209ENST00000508304 GIMAP8Q8ND71 665 aaPredicted RBP7.15□□□□□ -1.26
TRAPPC13-209ENST00000508304 TGIF2Q9GZN2 237 aa7.15□□□□□ -1.26
TRAPPC13-209ENST00000508304 ACBD3Q9H3P7 528 aa7.15□□□□□ -1.26
TRAPPC13-209ENST00000508304 ATF4P18848 351 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC13-209ENST00000508304 GLRBP48167 497 aa7.14□□□□□ -1.27
TRAPPC13-209ENST00000508304 PURAQ00577 322 aaKnown RBP7.14□□□□□ -1.27
TRAPPC13-209ENST00000508304 TUSC3Q13454 348 aa7.14□□□□□ -1.27
TRAPPC13-209ENST00000508304 TNNI3KQ59H18 835 aa7.14□□□□□ -1.27
TRAPPC13-209ENST00000508304 RBM12BQ8IXT5 1001 aaKnown RBP7.14□□□□□ -1.27
TRAPPC13-209ENST00000508304 UHMK1Q8TAS1 419 aaKnown RBP7.14□□□□□ -1.27
TRAPPC13-209ENST00000508304 NEIL1Q96FI4 390 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC13-209ENST00000508304 ARHGAP20Q9P2F6 1191 aa7.14□□□□□ -1.27
TRAPPC13-209ENST00000508304 INPP5FQ9Y2H2 1132 aa7.14□□□□□ -1.27
TRAPPC13-209ENST00000508304 IL18BPO95998 194 aa7.13□□□□□ -1.27
TRAPPC13-209ENST00000508304 LTFP02788 710 aa7.13□□□□□ -1.27
TRAPPC13-209ENST00000508304 ENO2P09104 434 aaPredicted RBP7.13□□□□□ -1.27
TRAPPC13-209ENST00000508304 COMTP21964 271 aa7.13□□□□□ -1.27
TRAPPC13-209ENST00000508304 PFKPQ01813 784 aa7.13□□□□□ -1.27
TRAPPC13-209ENST00000508304 ABHD18Q0P651 414 aa7.13□□□□□ -1.27
TRAPPC13-209ENST00000508304 USP10Q14694 798 aaKnown RBP7.13□□□□□ -1.27
TRAPPC13-209ENST00000508304 NRN1LQ496H8 165 aa7.13□□□□□ -1.27
TRAPPC13-209ENST00000508304 USP39Q53GS9 565 aaKnown RBP7.13□□□□□ -1.27
TRAPPC13-209ENST00000508304 AGBL4Q5VU57 503 aa7.13□□□□□ -1.27
TRAPPC13-209ENST00000508304 CD276Q5ZPR3 534 aa7.13□□□□□ -1.27
TRAPPC13-209ENST00000508304 FUKQ8N0W3 1084 aa7.13□□□□□ -1.27
TRAPPC13-209ENST00000508304 KCTD13Q8WZ19 329 aa7.13□□□□□ -1.27
TRAPPC13-209ENST00000508304 PTPN22Q9Y2R2 807 aa7.13□□□□□ -1.27
TRAPPC13-209ENST00000508304 TELO2Q9Y4R8 837 aa7.13□□□□□ -1.27
TRAPPC13-209ENST00000508304 ZNF839A8K0R7 811 aa7.12□□□□□ -1.27
TRAPPC13-209ENST00000508304 H0Y858 1186 aa7.12□□□□□ -1.27
TRAPPC13-209ENST00000508304 DDAH1O94760 285 aa7.12□□□□□ -1.27
TRAPPC13-209ENST00000508304 ZNF888P0CJ79 500 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC13-209ENST00000508304 PPP2R2AP63151 447 aa7.12□□□□□ -1.27
TRAPPC13-209ENST00000508304 RSPO2Q6UXX9 243 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC13-209ENST00000508304 AMER2Q8N7J2 671 aa7.12□□□□□ -1.27
TRAPPC13-209ENST00000508304 MICAL1Q8TDZ2 1067 aa7.12□□□□□ -1.27
TRAPPC13-209ENST00000508304 C11orf21Q9P2W6 132 aa7.12□□□□□ -1.27
TRAPPC13-209ENST00000508304 MRVI1Q9Y6F6 885 aa7.12□□□□□ -1.27
TRAPPC13-209ENST00000508304 PLSCR1O15162 318 aa7.11□□□□□ -1.27
TRAPPC13-209ENST00000508304 NARSO43776 548 aaKnown RBP7.11□□□□□ -1.27
TRAPPC13-209ENST00000508304 ZNF202O95125 648 aa7.11□□□□□ -1.27
TRAPPC13-209ENST00000508304 HABP4Q5JVS0 413 aaKnown RBP7.11□□□□□ -1.27
TRAPPC13-209ENST00000508304 Q6ZSN1 163 aa7.11□□□□□ -1.27
TRAPPC13-209ENST00000508304 EXTL1Q92935 676 aa7.11□□□□□ -1.27
TRAPPC13-209ENST00000508304 CHFRQ96EP1 664 aa7.11□□□□□ -1.27
TRAPPC13-209ENST00000508304 PHF20Q9BVI0 1012 aa7.11□□□□□ -1.27
TRAPPC13-209ENST00000508304 EPN3Q9H201 632 aa7.11□□□□□ -1.27
TRAPPC13-209ENST00000508304 WDR33Q9C0J8 1336 aaKnown RBP7.1□□□□□ -1.27
TRAPPC13-209ENST00000508304 DLX3O60479 287 aa7.1□□□□□ -1.27
TRAPPC13-209ENST00000508304 RAD17O75943 681 aa7.1□□□□□ -1.27
TRAPPC13-209ENST00000508304 PTH1RQ03431 593 aa7.1□□□□□ -1.27
TRAPPC13-209ENST00000508304 FXNQ16595 210 aa7.1□□□□□ -1.27
TRAPPC13-209ENST00000508304 SMN1Q16637 294 aaKnown RBP7.1□□□□□ -1.27
TRAPPC13-209ENST00000508304 SLC10A6Q3KNW5 377 aa7.1□□□□□ -1.27
TRAPPC13-209ENST00000508304 CARD11Q9BXL7 1154 aa7.1□□□□□ -1.27
TRAPPC13-209ENST00000508304 NUB1Q9Y5A7 615 aa7.1□□□□□ -1.27
TRAPPC13-209ENST00000508304 COL6A2P12110 1019 aa7.09□□□□□ -1.27
TRAPPC13-209ENST00000508304 GRK2P25098 689 aa7.09□□□□□ -1.27
TRAPPC13-209ENST00000508304 GRK3P35626 688 aa7.09□□□□□ -1.27
TRAPPC13-209ENST00000508304 EPHA5P54756 1037 aa7.09□□□□□ -1.27
TRAPPC13-209ENST00000508304 RAC3P60763 192 aa7.09□□□□□ -1.27
TRAPPC13-209ENST00000508304 EEPD1Q7L9B9 569 aa7.09□□□□□ -1.27
TRAPPC13-209ENST00000508304 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC13-209ENST00000508304 TACO1Q9BSH4 297 aaKnown RBP7.09□□□□□ -1.27
TRAPPC13-209ENST00000508304 IER2Q9BTL4 223 aa7.09□□□□□ -1.27
TRAPPC13-209ENST00000508304 PRKAG3Q9UGI9 489 aa7.09□□□□□ -1.27
TRAPPC13-209ENST00000508304 SLC30A1Q9Y6M5 507 aa7.09□□□□□ -1.27
TRAPPC13-209ENST00000508304 A0A1W2PQU0 124 aa7.08□□□□□ -1.28
TRAPPC13-209ENST00000508304 NKRFO15226 690 aaKnown RBP eCLIP7.08□□□□□ -1.28
TRAPPC13-209ENST00000508304 ACO1P21399 889 aaKnown RBP7.08□□□□□ -1.28
TRAPPC13-209ENST00000508304 POLD1P28340 1107 aa7.08□□□□□ -1.28
TRAPPC13-209ENST00000508304 INHBEP58166 350 aa7.08□□□□□ -1.28
TRAPPC13-209ENST00000508304 DGCR2P98153 550 aa7.08□□□□□ -1.28
TRAPPC13-209ENST00000508304 DPTQ07507 201 aa7.08□□□□□ -1.28
TRAPPC13-209ENST00000508304 SPIRE1Q08AE8 756 aa7.08□□□□□ -1.28
TRAPPC13-209ENST00000508304 TOP3AQ13472 1001 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC13-209ENST00000508304 RNF151Q2KHN1 245 aa7.08□□□□□ -1.28
TRAPPC13-209ENST00000508304 ZNF568Q3ZCX4 644 aa7.08□□□□□ -1.28
TRAPPC13-209ENST00000508304 LBX2Q6XYB7 198 aa7.08□□□□□ -1.28
TRAPPC13-209ENST00000508304 USP53Q70EK8 1073 aa7.08□□□□□ -1.28
TRAPPC13-209ENST00000508304 CSRNP2Q9H175 543 aa7.08□□□□□ -1.28
TRAPPC13-209ENST00000508304 CCSER2Q9H7U1 834 aa7.08□□□□□ -1.28
TRAPPC13-209ENST00000508304 OAZ3Q9UMX2 235 aa7.08□□□□□ -1.28
TRAPPC13-209ENST00000508304 ACOT7O00154 380 aa7.07□□□□□ -1.28
TRAPPC13-209ENST00000508304 AGRPO00253 132 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms