RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 MCM5P33992 734 aa10.67□□□□□ -0.7
UBE2D3-223ENST00000508249 ZNF543Q08ER8 600 aa10.67□□□□□ -0.7
UBE2D3-223ENST00000508249 TRAF1Q13077 416 aa10.67□□□□□ -0.7
UBE2D3-223ENST00000508249 ADAM15Q13444 863 aa10.67□□□□□ -0.7
UBE2D3-223ENST00000508249 WTAPQ15007 396 aa10.67□□□□□ -0.7
UBE2D3-223ENST00000508249 KIAA0753Q2KHM9 967 aa10.67□□□□□ -0.7
UBE2D3-223ENST00000508249 ADGRD2Q7Z7M1 963 aa10.67□□□□□ -0.7
UBE2D3-223ENST00000508249 MB21D2Q8IYB1 491 aaPredicted RBP10.67□□□□□ -0.7
UBE2D3-223ENST00000508249 TBC1D5Q92609 795 aa10.67□□□□□ -0.7
UBE2D3-223ENST00000508249 CLP1Q92989 425 aaKnown RBP10.67□□□□□ -0.7
UBE2D3-223ENST00000508249 TMEM87BQ96K49 555 aa10.67□□□□□ -0.7
UBE2D3-223ENST00000508249 YME1L1Q96TA2 773 aa10.67□□□□□ -0.7
UBE2D3-223ENST00000508249 ALG1Q9BT22 464 aa10.67□□□□□ -0.7
UBE2D3-223ENST00000508249 CD207Q9UJ71 328 aa10.67□□□□□ -0.7
UBE2D3-223ENST00000508249 CACNA1BQ00975 2339 aa10.67□□□□□ -0.7
UBE2D3-223ENST00000508249 MMP1P03956 469 aa10.66□□□□□ -0.7
UBE2D3-223ENST00000508249 PARP1P09874 1014 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-223ENST00000508249 CTNNB1P35222 781 aa10.66□□□□□ -0.7
UBE2D3-223ENST00000508249 SIGLEC14Q08ET2 396 aa10.66□□□□□ -0.7
UBE2D3-223ENST00000508249 SEC23AQ15436 765 aa10.66□□□□□ -0.7
UBE2D3-223ENST00000508249 PKN1Q16512 942 aa10.66□□□□□ -0.7
UBE2D3-223ENST00000508249 SUGP1Q8IWZ8 645 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-223ENST00000508249 PIAS4Q8N2W9 510 aaPredicted RBP10.66□□□□□ -0.7
UBE2D3-223ENST00000508249 C7orf31Q8N865 590 aa10.66□□□□□ -0.7
UBE2D3-223ENST00000508249 MAP3K14Q99558 947 aa10.66□□□□□ -0.7
UBE2D3-223ENST00000508249 LMAN2LQ9H0V9 348 aa10.66□□□□□ -0.7
UBE2D3-223ENST00000508249 DDX41Q9UJV9 622 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-223ENST00000508249 MTMR7Q9Y216 660 aa10.66□□□□□ -0.7
UBE2D3-223ENST00000508249 FNDC1Q4ZHG4 1894 aaPredicted RBP10.66□□□□□ -0.7
UBE2D3-223ENST00000508249 ADGRA3Q8IWK6 1321 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 RSPH10B2B2RC85 870 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 H0Y858 1186 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 NCK2O43639 380 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 DDAH1O94760 285 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 UPP2O95045 317 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 RSPH10BP0C881 870 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 CASTP20810 708 aaKnown RBP10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 AVPR2P30518 371 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 LIFRP42702 1097 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 COASYQ13057 564 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 DGKDQ16760 1214 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 SEPT14Q6ZU15 432 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 CHST3Q7LGC8 479 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 CATIPQ7Z7H3 387 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 SKAP1Q86WV1 359 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 PPTC7Q8NI37 304 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 TAAR1Q96RJ0 339 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 ZKSCAN3Q9BRR0 538 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 C16orf70Q9BSU1 422 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 TLR9Q9NR96 1032 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 NCOR2Q9Y618 2525 aa10.65□□□□□ -0.7
UBE2D3-223ENST00000508249 DENND4AQ7Z401 1863 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 CSPG5O95196 566 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 CALM1P0DP23 149 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 CALM2P0DP24 149 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 CALM3P0DP25 149 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 KIF5BP33176 963 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 BMPR1AP36894 532 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 THPOP40225 353 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 NBL1P41271 181 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 HSDL1Q3SXM5 330 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 STOX1Q6ZVD7 989 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 CYB5R4Q7L1T6 521 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 ERMP1Q7Z2K6 904 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 RGS22Q8NE09 1264 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 VN1R2Q8NFZ6 395 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 SYTL5Q8TDW5 730 aaPredicted RBP10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 KCNB2Q92953 911 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 ZNF689Q96CS4 500 aaPredicted RBP10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 NEK1Q96PY6 1258 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 LZTS2Q9BRK4 669 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 KATNAL1Q9BW62 490 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 IFIH1Q9BYX4 1025 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 CPVLQ9H3G5 476 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 GPCPD1Q9NPB8 672 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 USP15Q9Y4E8 981 aaPredicted RBP10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 PCDHGC5Q9Y5F6 944 aa10.64□□□□□ -0.71
UBE2D3-223ENST00000508249 MYO10Q9HD67 2058 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 SH2B2O14492 632 aaPredicted RBP10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 OPLAHO14841 1288 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 TREHO43280 583 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 PRC1O43663 620 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 RB1P06400 928 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 CTSHP09668 335 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 ARP10275 920 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 PSMA5P28066 241 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 SMARCA1P28370 1054 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 HSPA4P34932 840 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 GNAQP50148 359 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 RCAN1P53805 252 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 ADAM17P78536 824 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 RBM10P98175 930 aaKnown RBP10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 GRM4Q14833 912 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 CRIPAKQ8N1N5 446 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 CTCFLQ8NI51 663 aaPredicted RBP10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 IGDCC4Q8TDY8 1250 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 LINC01599Q8WXQ3 324 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 SUSD6Q92537 303 aa10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 ATOH1Q92858 354 aaPredicted RBP10.63□□□□□ -0.71
UBE2D3-223ENST00000508249 C11orf84Q9BUA3 381 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms