RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 FAM184AQ8NB25 1140 aa18.58■□□□□ 0.56
DDR1-261ENST00000507901 SEPT1Q8WYJ6 367 aa18.58■□□□□ 0.56
DDR1-261ENST00000507901 TRIM43Q96BQ3 446 aaPredicted RBP18.58■□□□□ 0.56
DDR1-261ENST00000507901 ZNF577Q9BSK1 485 aa18.58■□□□□ 0.56
DDR1-261ENST00000507901 FOXP1Q9H334 677 aaPredicted RBP18.58■□□□□ 0.56
DDR1-261ENST00000507901 BRMS1Q9HCU9 246 aa18.58■□□□□ 0.56
DDR1-261ENST00000507901 KCNMB3Q9NPA1 279 aa18.58■□□□□ 0.56
DDR1-261ENST00000507901 RANBP2P49792 3224 aaKnown RBP18.57■□□□□ 0.56
DDR1-261ENST00000507901 K7ELQ4 463 aaPredicted RBP18.57■□□□□ 0.56
DDR1-261ENST00000507901 NOP56O00567 594 aaKnown RBP18.57■□□□□ 0.56
DDR1-261ENST00000507901 B4GALT4O60513 344 aa18.57■□□□□ 0.56
DDR1-261ENST00000507901 CLTBP09497 229 aa18.57■□□□□ 0.56
DDR1-261ENST00000507901 ITGB8P26012 769 aa18.57■□□□□ 0.56
DDR1-261ENST00000507901 U2AF2P26368 475 aaKnown RBP eCLIP18.57■□□□□ 0.56
DDR1-261ENST00000507901 TCF7P36402 384 aaPredicted RBP18.57■□□□□ 0.56
DDR1-261ENST00000507901 ACTR2P61160 394 aa18.57■□□□□ 0.56
DDR1-261ENST00000507901 HIC1Q14526 733 aa18.57■□□□□ 0.56
DDR1-261ENST00000507901 VTI1AQ96AJ9 217 aa18.57■□□□□ 0.56
DDR1-261ENST00000507901 SDF4Q9BRK5 362 aa18.57■□□□□ 0.56
DDR1-261ENST00000507901 KATNAL1Q9BW62 490 aa18.57■□□□□ 0.56
DDR1-261ENST00000507901 TBC1D22BQ9NU19 505 aa18.57■□□□□ 0.56
DDR1-261ENST00000507901 PCDH10Q9P2E7 1040 aa18.57■□□□□ 0.56
DDR1-261ENST00000507901 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.57■□□□□ 0.56
DDR1-261ENST00000507901 H3BRB1 525 aa18.56■□□□□ 0.56
DDR1-261ENST00000507901 PSMD10O75832 226 aa18.56■□□□□ 0.56
DDR1-261ENST00000507901 GCFC2P16383 781 aaKnown RBP18.56■□□□□ 0.56
DDR1-261ENST00000507901 KIAA0753Q2KHM9 967 aa18.56■□□□□ 0.56
DDR1-261ENST00000507901 LETM2Q2VYF4 491 aa18.56■□□□□ 0.56
DDR1-261ENST00000507901 ABHD15Q6UXT9 468 aa18.56■□□□□ 0.56
DDR1-261ENST00000507901 TRIM50Q86XT4 487 aa18.56■□□□□ 0.56
DDR1-261ENST00000507901 PPP1R13LQ8WUF5 828 aa18.56■□□□□ 0.56
DDR1-261ENST00000507901 INTS4Q96HW7 963 aaKnown RBP18.56■□□□□ 0.56
DDR1-261ENST00000507901 RIT2Q99578 217 aa18.56■□□□□ 0.56
DDR1-261ENST00000507901 TUT1Q9H6E5 874 aaKnown RBP18.56■□□□□ 0.56
DDR1-261ENST00000507901 DCDC2CA8MYV0 355 aa18.55■□□□□ 0.56
DDR1-261ENST00000507901 MAGEA10P43363 369 aaPredicted RBP18.55■□□□□ 0.56
DDR1-261ENST00000507901 SP4Q02446 784 aa18.55■□□□□ 0.56
DDR1-261ENST00000507901 ZNF746Q6NUN9 644 aaPredicted RBP18.55■□□□□ 0.56
DDR1-261ENST00000507901 HAS1Q92839 578 aa18.55■□□□□ 0.56
DDR1-261ENST00000507901 UIMC1Q96RL1 719 aa18.55■□□□□ 0.56
DDR1-261ENST00000507901 TRPV6Q9H1D0 765 aa18.55■□□□□ 0.56
DDR1-261ENST00000507901 TRMT13Q9NUP7 481 aaKnown RBP18.55■□□□□ 0.56
DDR1-261ENST00000507901 DDX25Q9UHL0 483 aaKnown RBP18.55■□□□□ 0.56
DDR1-261ENST00000507901 GTF2IRD1Q9UHL9 959 aa18.55■□□□□ 0.56
DDR1-261ENST00000507901 MYH9P35579 1960 aaKnown RBP18.54■□□□□ 0.56
DDR1-261ENST00000507901 SAFBQ15424 915 aaKnown RBP eCLIP18.54■□□□□ 0.56
DDR1-261ENST00000507901 GDF6Q6KF10 455 aaPredicted RBP18.54■□□□□ 0.56
DDR1-261ENST00000507901 NOSTRINQ8IVI9 506 aa18.54■□□□□ 0.56
DDR1-261ENST00000507901 AFAP1L1Q8TED9 768 aa18.54■□□□□ 0.56
DDR1-261ENST00000507901 GJA10Q969M2 543 aa18.54■□□□□ 0.56
DDR1-261ENST00000507901 NAP1L4Q99733 375 aaKnown RBP18.54■□□□□ 0.56
DDR1-261ENST00000507901 HDAC6Q9UBN7 1215 aa18.54■□□□□ 0.56
DDR1-261ENST00000507901 PRKAG2Q9UGJ0 569 aa18.54■□□□□ 0.56
DDR1-261ENST00000507901 SMC3Q9UQE7 1217 aa18.54■□□□□ 0.56
DDR1-261ENST00000507901 KIF3AQ9Y496 699 aa18.54■□□□□ 0.56
DDR1-261ENST00000507901 TANC1Q9C0D5 1861 aa18.54■□□□□ 0.56
DDR1-261ENST00000507901 TBX3O15119 743 aa18.53■□□□□ 0.56
DDR1-261ENST00000507901 CCNT1O60563 726 aaKnown RBP18.53■□□□□ 0.56
DDR1-261ENST00000507901 SUPT20HL2P0C7V6 817 aa18.53■□□□□ 0.56
DDR1-261ENST00000507901 ADAM17P78536 824 aa18.53■□□□□ 0.56
DDR1-261ENST00000507901 KRT76Q01546 638 aa18.53■□□□□ 0.56
DDR1-261ENST00000507901 PLPPR4Q7Z2D5 763 aa18.53■□□□□ 0.56
DDR1-261ENST00000507901 SMAP1Q8IYB5 467 aaPredicted RBP18.53■□□□□ 0.56
DDR1-261ENST00000507901 KAT6AQ92794 2004 aa18.53■□□□□ 0.56
DDR1-261ENST00000507901 RNPEPQ9H4A4 650 aa18.53■□□□□ 0.56
DDR1-261ENST00000507901 VAV3Q9UKW4 847 aa18.53■□□□□ 0.56
DDR1-261ENST00000507901 DDX39AO00148 427 aaKnown RBP18.52■□□□□ 0.56
DDR1-261ENST00000507901 TLR3O15455 904 aaKnown RBP18.52■□□□□ 0.56
DDR1-261ENST00000507901 SMIM10L2AP0DMW4 78 aa18.52■□□□□ 0.56
DDR1-261ENST00000507901 SMIM10L2BP0DMW5 78 aa18.52■□□□□ 0.56
DDR1-261ENST00000507901 UTP14CQ5TAP6 766 aaKnown RBP18.52■□□□□ 0.56
DDR1-261ENST00000507901 LRCH2Q5VUJ6 765 aa18.52■□□□□ 0.56
DDR1-261ENST00000507901 POTEDQ86YR6 584 aa18.52■□□□□ 0.56
DDR1-261ENST00000507901 CCDC60Q8IWA6 550 aaPredicted RBP18.52■□□□□ 0.56
DDR1-261ENST00000507901 FAM20AQ96MK3 541 aa18.52■□□□□ 0.56
DDR1-261ENST00000507901 MTMR9Q96QG7 549 aa18.52■□□□□ 0.56
DDR1-261ENST00000507901 LBHD1Q9BQE6 289 aaPredicted RBP18.52■□□□□ 0.56
DDR1-261ENST00000507901 NOC4LQ9BVI4 516 aaKnown RBP18.52■□□□□ 0.56
DDR1-261ENST00000507901 UNC45AQ9H3U1 944 aa18.52■□□□□ 0.56
DDR1-261ENST00000507901 SMARCAD1Q9H4L7 1026 aa18.52■□□□□ 0.56
DDR1-261ENST00000507901 TMEM39AQ9NV64 488 aa18.52■□□□□ 0.56
DDR1-261ENST00000507901 TRIOBPQ9H2D6 2365 aa18.52■□□□□ 0.55
DDR1-261ENST00000507901 IGSF9BQ9UPX0 1349 aa18.51■□□□□ 0.55
DDR1-261ENST00000507901 TIMP1P01033 207 aa18.51■□□□□ 0.55
DDR1-261ENST00000507901 ATP4AP20648 1035 aa18.51■□□□□ 0.55
DDR1-261ENST00000507901 TRAPPC10P48553 1259 aa18.51■□□□□ 0.55
DDR1-261ENST00000507901 TOB1P50616 345 aaPredicted RBP18.51■□□□□ 0.55
DDR1-261ENST00000507901 RBL2Q08999 1139 aa18.51■□□□□ 0.55
DDR1-261ENST00000507901 SPIRE1Q08AE8 756 aa18.51■□□□□ 0.55
DDR1-261ENST00000507901 C7orf31Q8N865 590 aa18.51■□□□□ 0.55
DDR1-261ENST00000507901 DHX38Q92620 1227 aaKnown RBP18.51■□□□□ 0.55
DDR1-261ENST00000507901 UBE2OQ9C0C9 1292 aaKnown RBP18.51■□□□□ 0.55
DDR1-261ENST00000507901 ERAP1Q9NZ08 941 aa18.51■□□□□ 0.55
DDR1-261ENST00000507901 ZNF215Q9UL58 517 aaPredicted RBP18.51■□□□□ 0.55
DDR1-261ENST00000507901 MAFBQ9Y5Q3 323 aaPredicted RBP18.51■□□□□ 0.55
DDR1-261ENST00000507901 GAS7O60861 476 aa18.5■□□□□ 0.55
DDR1-261ENST00000507901 STAT5BP51692 787 aa18.5■□□□□ 0.55
DDR1-261ENST00000507901 ZNF200P98182 395 aaPredicted RBP18.5■□□□□ 0.55
DDR1-261ENST00000507901 PPP2R5CQ13362 524 aa18.5■□□□□ 0.55
DDR1-261ENST00000507901 ORC2Q13416 577 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms