RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 MMP3P08254 477 aa22.61■■□□□ 1.21
USP53-203ENST00000507597 ACTR2P61160 394 aa22.61■■□□□ 1.21
USP53-203ENST00000507597 SP4Q02446 784 aa22.61■■□□□ 1.21
USP53-203ENST00000507597 PDIA5Q14554 519 aa22.61■■□□□ 1.21
USP53-203ENST00000507597 LRRC41Q15345 812 aa22.61■■□□□ 1.21
USP53-203ENST00000507597 HSDL1Q3SXM5 330 aa22.61■■□□□ 1.21
USP53-203ENST00000507597 FAM173BQ6P4H8 233 aa22.61■■□□□ 1.21
USP53-203ENST00000507597 KCNG4Q8TDN1 519 aa22.61■■□□□ 1.21
USP53-203ENST00000507597 GPR20Q99678 358 aa22.61■■□□□ 1.21
USP53-203ENST00000507597 SCAND2PQ9GZW5 306 aaPredicted RBP22.61■■□□□ 1.21
USP53-203ENST00000507597 TMEM60Q9H2L4 133 aa22.61■■□□□ 1.21
USP53-203ENST00000507597 ZNF215Q9UL58 517 aaPredicted RBP22.61■■□□□ 1.21
USP53-203ENST00000507597 ZDHHC9Q9Y397 364 aa22.61■■□□□ 1.21
USP53-203ENST00000507597 WNT7AO00755 349 aa22.6■■□□□ 1.21
USP53-203ENST00000507597 NCLP19338 710 aaKnown RBP22.6■■□□□ 1.21
USP53-203ENST00000507597 NASPP49321 788 aaPredicted RBP22.6■■□□□ 1.21
USP53-203ENST00000507597 FXR2P51116 673 aaKnown RBP eCLIP22.6■■□□□ 1.21
USP53-203ENST00000507597 CEBPZQ03701 1054 aaKnown RBP22.6■■□□□ 1.21
USP53-203ENST00000507597 SLC39A14Q15043 492 aa22.6■■□□□ 1.21
USP53-203ENST00000507597 C4orf32Q8N8J7 132 aa22.6■■□□□ 1.21
USP53-203ENST00000507597 LENG1Q96BZ8 264 aaPredicted RBP22.6■■□□□ 1.21
USP53-203ENST00000507597 USP28Q96RU2 1077 aa22.6■■□□□ 1.21
USP53-203ENST00000507597 SEZ6LQ9BYH1 1024 aa22.6■■□□□ 1.21
USP53-203ENST00000507597 SMARCAD1Q9H4L7 1026 aa22.6■■□□□ 1.21
USP53-203ENST00000507597 DISC1Q9NRI5 854 aa22.6■■□□□ 1.21
USP53-203ENST00000507597 CLIC4Q9Y696 253 aa22.6■■□□□ 1.21
USP53-203ENST00000507597 BACH1O14867 736 aa22.59■■□□□ 1.21
USP53-203ENST00000507597 SORBS3O60504 671 aa22.59■■□□□ 1.21
USP53-203ENST00000507597 ATG7O95352 703 aa22.59■■□□□ 1.21
USP53-203ENST00000507597 MYL3P08590 195 aa22.59■■□□□ 1.21
USP53-203ENST00000507597 TCF7P36402 384 aaPredicted RBP22.59■■□□□ 1.21
USP53-203ENST00000507597 TECP42680 631 aa22.59■■□□□ 1.21
USP53-203ENST00000507597 SLC26A2P50443 739 aa22.59■■□□□ 1.21
USP53-203ENST00000507597 KCNA10Q16322 511 aa22.59■■□□□ 1.21
USP53-203ENST00000507597 CSPP1Q1MSJ5 1256 aa22.59■■□□□ 1.21
USP53-203ENST00000507597 FOXD4L6Q3SYB3 417 aaPredicted RBP22.59■■□□□ 1.21
USP53-203ENST00000507597 TMEM63BQ5T3F8 832 aa22.59■■□□□ 1.21
USP53-203ENST00000507597 FOXD4L3Q6VB84 417 aaPredicted RBP22.59■■□□□ 1.21
USP53-203ENST00000507597 NEK9Q8TD19 979 aa22.59■■□□□ 1.21
USP53-203ENST00000507597 AK8Q96MA6 479 aa22.59■■□□□ 1.21
USP53-203ENST00000507597 GLT1D1Q96MS3 346 aa22.59■■□□□ 1.21
USP53-203ENST00000507597 MTG1Q9BT17 334 aaPredicted RBP22.59■■□□□ 1.21
USP53-203ENST00000507597 TFIP11Q9UBB9 837 aaKnown RBP22.59■■□□□ 1.21
USP53-203ENST00000507597 SPTLC2O15270 562 aa22.58■■□□□ 1.21
USP53-203ENST00000507597 CHMP2AO43633 222 aa22.58■■□□□ 1.21
USP53-203ENST00000507597 PPP6R2O75170 966 aa22.58■■□□□ 1.21
USP53-203ENST00000507597 SUPT20HL2P0C7V6 817 aa22.58■■□□□ 1.21
USP53-203ENST00000507597 DNM1Q05193 864 aaKnown RBP22.58■■□□□ 1.21
USP53-203ENST00000507597 EPHA7Q15375 998 aa22.58■■□□□ 1.21
USP53-203ENST00000507597 HAUS3Q68CZ6 603 aa22.58■■□□□ 1.21
USP53-203ENST00000507597 NCAPH2Q6IBW4 605 aa22.58■■□□□ 1.21
USP53-203ENST00000507597 GLG1Q92896 1179 aa22.58■■□□□ 1.21
USP53-203ENST00000507597 ATP6V0A1Q93050 837 aa22.58■■□□□ 1.21
USP53-203ENST00000507597 VTI1AQ96AJ9 217 aa22.58■■□□□ 1.21
USP53-203ENST00000507597 UIMC1Q96RL1 719 aa22.58■■□□□ 1.21
USP53-203ENST00000507597 UNC45AQ9H3U1 944 aa22.58■■□□□ 1.21
USP53-203ENST00000507597 ASGR1P07306 291 aa22.57■■□□□ 1.2
USP53-203ENST00000507597 HOXD8P13378 290 aaPredicted RBP22.57■■□□□ 1.2
USP53-203ENST00000507597 LONP1P36776 959 aaKnown RBP22.57■■□□□ 1.2
USP53-203ENST00000507597 BEX3Q00994 111 aa22.57■■□□□ 1.2
USP53-203ENST00000507597 ABHD15Q6UXT9 468 aa22.57■■□□□ 1.2
USP53-203ENST00000507597 LINC00301Q8NCQ3 95 aa22.57■■□□□ 1.2
USP53-203ENST00000507597 ERAP1Q9NZ08 941 aa22.57■■□□□ 1.2
USP53-203ENST00000507597 LRWD1Q9UFC0 647 aa22.57■■□□□ 1.2
USP53-203ENST00000507597 VAV3Q9UKW4 847 aa22.57■■□□□ 1.2
USP53-203ENST00000507597 SRPRBQ9Y5M8 271 aaKnown RBP22.57■■□□□ 1.2
USP53-203ENST00000507597 GSTTP1A0A1W2PQM5 241 aa22.56■■□□□ 1.2
USP53-203ENST00000507597 CCDC85CA6NKD9 419 aa22.56■■□□□ 1.2
USP53-203ENST00000507597 P4HBP07237 508 aaKnown RBP22.56■■□□□ 1.2
USP53-203ENST00000507597 STAT5BP51692 787 aa22.56■■□□□ 1.2
USP53-203ENST00000507597 ACLYP53396 1101 aa22.56■■□□□ 1.2
USP53-203ENST00000507597 UTP14CQ5TAP6 766 aaKnown RBP22.56■■□□□ 1.2
USP53-203ENST00000507597 KRT79Q5XKE5 535 aa22.56■■□□□ 1.2
USP53-203ENST00000507597 B3GNT9Q6UX72 402 aa22.56■■□□□ 1.2
USP53-203ENST00000507597 PLPPR4Q7Z2D5 763 aa22.56■■□□□ 1.2
USP53-203ENST00000507597 KRI1Q8N9T8 703 aaKnown RBP22.56■■□□□ 1.2
USP53-203ENST00000507597 SPATA32Q96LK8 384 aa22.56■■□□□ 1.2
USP53-203ENST00000507597 ZNF302Q9NR11 478 aa22.56■■□□□ 1.2
USP53-203ENST00000507597 EMSYQ7Z589 1322 aa22.56■■□□□ 1.2
USP53-203ENST00000507597 VWA3AA6NCI4 1184 aa22.55■■□□□ 1.2
USP53-203ENST00000507597 SLC26A4O43511 780 aa22.55■■□□□ 1.2
USP53-203ENST00000507597 LGR5O75473 907 aa22.55■■□□□ 1.2
USP53-203ENST00000507597 CCNE2O96020 404 aa22.55■■□□□ 1.2
USP53-203ENST00000507597 LGALS2P05162 132 aa22.55■■□□□ 1.2
USP53-203ENST00000507597 MUTP22033 750 aa22.55■■□□□ 1.2
USP53-203ENST00000507597 TXLNAP40222 546 aa22.55■■□□□ 1.2
USP53-203ENST00000507597 PURAQ00577 322 aaKnown RBP22.55■■□□□ 1.2
USP53-203ENST00000507597 PTPAQ15257 358 aa22.55■■□□□ 1.2
USP53-203ENST00000507597 NECAB2Q7Z6G3 386 aa22.55■■□□□ 1.2
USP53-203ENST00000507597 AFAP1L1Q8TED9 768 aa22.55■■□□□ 1.2
USP53-203ENST00000507597 BCAS3Q9H6U6 928 aa22.55■■□□□ 1.2
USP53-203ENST00000507597 RCOR1Q9UKL0 485 aa22.55■■□□□ 1.2
USP53-203ENST00000507597 PHF24Q9UPV7 400 aa22.55■■□□□ 1.2
USP53-203ENST00000507597 H3BRB1 525 aa22.54■■□□□ 1.2
USP53-203ENST00000507597 CTAGE5O15320 804 aa22.54■■□□□ 1.2
USP53-203ENST00000507597 PSMC5P62195 406 aa22.54■■□□□ 1.2
USP53-203ENST00000507597 CCSAPQ6IQ19 270 aaPredicted RBP22.54■■□□□ 1.2
USP53-203ENST00000507597 SWSAP1Q6NVH7 229 aa22.54■■□□□ 1.2
USP53-203ENST00000507597 PDXDC2PQ6P474 469 aa22.54■■□□□ 1.2
USP53-203ENST00000507597 CKAP2LQ8IYA6 745 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms