RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 BLOC1S2Q6QNY1 142 aa16.49■□□□□ 0.23
HMGCS1-203ENST00000507004 RAB11FIP4Q86YS3 637 aa16.49■□□□□ 0.23
HMGCS1-203ENST00000507004 RASEFQ8IZ41 740 aa16.49■□□□□ 0.23
HMGCS1-203ENST00000507004 USP38Q8NB14 1042 aa16.49■□□□□ 0.23
HMGCS1-203ENST00000507004 IL27Q8NEV9 243 aa16.49■□□□□ 0.23
HMGCS1-203ENST00000507004 KAT6AQ92794 2004 aa16.49■□□□□ 0.23
HMGCS1-203ENST00000507004 GLG1Q92896 1179 aa16.49■□□□□ 0.23
HMGCS1-203ENST00000507004 MXRA8Q9BRK3 442 aa16.49■□□□□ 0.23
HMGCS1-203ENST00000507004 AZI2Q9H6S1 392 aa16.49■□□□□ 0.23
HMGCS1-203ENST00000507004 JPH1Q9HDC5 661 aaPredicted RBP16.49■□□□□ 0.23
HMGCS1-203ENST00000507004 SETD4Q9NVD3 440 aa16.49■□□□□ 0.23
HMGCS1-203ENST00000507004 INSL6Q9Y581 213 aa16.49■□□□□ 0.23
HMGCS1-203ENST00000507004 V9GY48 417 aaPredicted RBP16.49■□□□□ 0.23
HMGCS1-203ENST00000507004 ESYT2A0FGR8 921 aa16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 SMCO2A6NFE2 343 aa16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 SLC26A2P50443 739 aa16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 METAP2P50579 478 aaKnown RBP eCLIP16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 ADAM17P78536 824 aa16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 MRPS5P82675 430 aaKnown RBP16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 ARHGAP4P98171 946 aa16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 SP4Q02446 784 aa16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 FUT2Q10981 343 aa16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 ADCK5Q3MIX3 580 aa16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 CEP55Q53EZ4 464 aa16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 NIPA1Q7RTP0 329 aa16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 DBF4BQ8NFT6 615 aa16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 LMBR1Q8WVP7 490 aa16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 PPM1EQ8WY54 764 aa16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 WNT8BQ93098 351 aa16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 SAMD11Q96NU1 681 aa16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 BRPF3Q9ULD4 1205 aa16.48■□□□□ 0.23
HMGCS1-203ENST00000507004 hCG_1642624A0A1W2PR95 340 aa16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 ATP9AO75110 1047 aa16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 GNA11P29992 359 aa16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 SREBF1P36956 1147 aa16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 AKAP17AQ02040 695 aaKnown RBP16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 PPFIA1Q13136 1202 aa16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 HIC1Q14526 733 aa16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 MBTPS1Q14703 1052 aa16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 PFKFB3Q16875 520 aaPredicted RBP16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 TRIM50Q86XT4 487 aa16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 ARNTL2Q8WYA1 636 aa16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 TGS1Q96RS0 853 aaKnown RBP16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 ANO3Q9BYT9 981 aa16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 BCAS3Q9H6U6 928 aa16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 C6orf50Q9HD87 102 aa16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 KCNH7Q9NS40 1196 aa16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 SLC9A2Q9UBY0 812 aa16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 COG5Q9UP83 839 aa16.47■□□□□ 0.23
HMGCS1-203ENST00000507004 GSTTP1A0A1W2PQM5 241 aa16.46■□□□□ 0.23
HMGCS1-203ENST00000507004 STXBP3O00186 592 aa16.46■□□□□ 0.23
HMGCS1-203ENST00000507004 SCG2P13521 617 aa16.46■□□□□ 0.23
HMGCS1-203ENST00000507004 ZNF76P36508 570 aa16.46■□□□□ 0.23
HMGCS1-203ENST00000507004 ERVK-21P61565 698 aa16.46■□□□□ 0.23
HMGCS1-203ENST00000507004 DEFB103AP81534 67 aa16.46■□□□□ 0.23
HMGCS1-203ENST00000507004 COL9A3Q14050 684 aaPredicted RBP16.46■□□□□ 0.23
HMGCS1-203ENST00000507004 PLPPR4Q7Z2D5 763 aa16.46■□□□□ 0.23
HMGCS1-203ENST00000507004 BICD2Q8TD16 824 aa16.46■□□□□ 0.23
HMGCS1-203ENST00000507004 TCEANC2Q96MN5 208 aa16.46■□□□□ 0.23
HMGCS1-203ENST00000507004 JAKMIP1Q96N16 626 aaKnown RBP16.46■□□□□ 0.23
HMGCS1-203ENST00000507004 ASB2Q96Q27 587 aa16.46■□□□□ 0.23
HMGCS1-203ENST00000507004 NAP1L2Q9ULW6 460 aaPredicted RBP16.46■□□□□ 0.23
HMGCS1-203ENST00000507004 MTCH2Q9Y6C9 303 aa16.46■□□□□ 0.23
HMGCS1-203ENST00000507004 NID2Q14112 1375 aa16.46■□□□□ 0.23
HMGCS1-203ENST00000507004 MBLAC1A4D2B0 266 aaPredicted RBP16.45■□□□□ 0.22
HMGCS1-203ENST00000507004 MEIS1O00470 390 aa16.45■□□□□ 0.22
HMGCS1-203ENST00000507004 NEFLP07196 543 aa16.45■□□□□ 0.22
HMGCS1-203ENST00000507004 CLK2P49760 499 aaKnown RBP16.45■□□□□ 0.22
HMGCS1-203ENST00000507004 MKRN4PQ13434 485 aaPredicted RBP16.45■□□□□ 0.22
HMGCS1-203ENST00000507004 CCDC85BQ15834 202 aaPredicted RBP16.45■□□□□ 0.22
HMGCS1-203ENST00000507004 GRIK4Q16099 956 aa16.45■□□□□ 0.22
HMGCS1-203ENST00000507004 Q6ZUG5 572 aa16.45■□□□□ 0.22
HMGCS1-203ENST00000507004 MYOCDQ8IZQ8 938 aa16.45■□□□□ 0.22
HMGCS1-203ENST00000507004 CCDC148Q8NFR7 591 aa16.45■□□□□ 0.22
HMGCS1-203ENST00000507004 AGXT2Q9BYV1 514 aa16.45■□□□□ 0.22
HMGCS1-203ENST00000507004 TUBE1Q9UJT0 475 aa16.45■□□□□ 0.22
HMGCS1-203ENST00000507004 SQORQ9Y6N5 450 aa16.45■□□□□ 0.22
HMGCS1-203ENST00000507004 CDH23Q9H251 3354 aa16.44■□□□□ 0.22
HMGCS1-203ENST00000507004 PRPF3O43395 683 aaKnown RBP16.44■□□□□ 0.22
HMGCS1-203ENST00000507004 CTSHP09668 335 aa16.44■□□□□ 0.22
HMGCS1-203ENST00000507004 RPS6KB1P23443 525 aa16.44■□□□□ 0.22
HMGCS1-203ENST00000507004 HTRA4P83105 476 aaPredicted RBP16.44■□□□□ 0.22
HMGCS1-203ENST00000507004 SETQ01105 290 aaPredicted RBP16.44■□□□□ 0.22
HMGCS1-203ENST00000507004 IER5Q5VY09 327 aa16.44■□□□□ 0.22
HMGCS1-203ENST00000507004 TYW1BQ6NUM6 668 aa16.44■□□□□ 0.22
HMGCS1-203ENST00000507004 BRF1Q92994 677 aa16.44■□□□□ 0.22
HMGCS1-203ENST00000507004 TOP1MTQ969P6 601 aa16.44■□□□□ 0.22
HMGCS1-203ENST00000507004 RNF26Q9BY78 433 aaPredicted RBP16.44■□□□□ 0.22
HMGCS1-203ENST00000507004 IFIH1Q9BYX4 1025 aaKnown RBP16.44■□□□□ 0.22
HMGCS1-203ENST00000507004 ZMYND12Q9H0C1 365 aa16.44■□□□□ 0.22
HMGCS1-203ENST00000507004 FAM217BQ9NTX9 383 aaPredicted RBP16.44■□□□□ 0.22
HMGCS1-203ENST00000507004 TCEAL9Q9UHQ7 104 aa16.44■□□□□ 0.22
HMGCS1-203ENST00000507004 SNX14Q9Y5W7 946 aa16.44■□□□□ 0.22
HMGCS1-203ENST00000507004 LINC01553A4QN01 128 aa16.43■□□□□ 0.22
HMGCS1-203ENST00000507004 M0QZ92 97 aa16.43■□□□□ 0.22
HMGCS1-203ENST00000507004 CYP3A4P08684 503 aa16.43■□□□□ 0.22
HMGCS1-203ENST00000507004 CDC27P30260 824 aa16.43■□□□□ 0.22
HMGCS1-203ENST00000507004 STAT5BP51692 787 aa16.43■□□□□ 0.22
HMGCS1-203ENST00000507004 GRB10Q13322 594 aa16.43■□□□□ 0.22
HMGCS1-203ENST00000507004 SKIV2LQ15477 1246 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms