RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 KAT14Q9H8E8 782 aa11.09□□□□□ -0.63
CLCN3-205ENST00000506924 SRRDQ9UH36 339 aa11.09□□□□□ -0.63
CLCN3-205ENST00000506924 FEM1BQ9UK73 627 aa11.09□□□□□ -0.63
CLCN3-205ENST00000506924 POLIQ9UNA4 740 aa11.09□□□□□ -0.63
CLCN3-205ENST00000506924 DOCK3Q8IZD9 2030 aa11.09□□□□□ -0.63
CLCN3-205ENST00000506924 C2CD2LO14523 706 aa11.08□□□□□ -0.64
CLCN3-205ENST00000506924 IFIT3O14879 490 aaKnown RBP11.08□□□□□ -0.64
CLCN3-205ENST00000506924 WIPF1O43516 503 aa11.08□□□□□ -0.64
CLCN3-205ENST00000506924 SIN3BO75182 1162 aa11.08□□□□□ -0.64
CLCN3-205ENST00000506924 HOXD10P28358 340 aa11.08□□□□□ -0.64
CLCN3-205ENST00000506924 FLT3LGP49771 235 aa11.08□□□□□ -0.64
CLCN3-205ENST00000506924 ANTXR2P58335 489 aa11.08□□□□□ -0.64
CLCN3-205ENST00000506924 IFIT1BQ5T764 474 aaKnown RBP11.08□□□□□ -0.64
CLCN3-205ENST00000506924 GPR142Q7Z601 462 aa11.08□□□□□ -0.64
CLCN3-205ENST00000506924 NCAPG2Q86XI2 1143 aa11.08□□□□□ -0.64
CLCN3-205ENST00000506924 DGKHQ86XP1 1220 aa11.08□□□□□ -0.64
CLCN3-205ENST00000506924 PRPF38AQ8NAV1 312 aaKnown RBP11.08□□□□□ -0.64
CLCN3-205ENST00000506924 TTC14Q96N46 770 aa11.08□□□□□ -0.64
CLCN3-205ENST00000506924 LRRC2Q9BYS8 371 aa11.08□□□□□ -0.64
CLCN3-205ENST00000506924 SPATC1LQ9H0A9 340 aa11.08□□□□□ -0.64
CLCN3-205ENST00000506924 CPVLQ9H3G5 476 aa11.08□□□□□ -0.64
CLCN3-205ENST00000506924 RAVER2Q9HCJ3 691 aaKnown RBP11.08□□□□□ -0.64
CLCN3-205ENST00000506924 GDF2Q9UK05 429 aaPredicted RBP11.08□□□□□ -0.64
CLCN3-205ENST00000506924 PRR12Q9ULL5 1215 aa11.08□□□□□ -0.64
CLCN3-205ENST00000506924 SYNPO2Q9UMS6 1093 aa11.08□□□□□ -0.64
CLCN3-205ENST00000506924 CTDP1Q9Y5B0 961 aaPredicted RBP11.08□□□□□ -0.64
CLCN3-205ENST00000506924 PRC1O43663 620 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 ZBED4O75132 1171 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 MAP3K6O95382 1288 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 PDHBP11177 359 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 ELNP15502 786 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 TAL1P17542 331 aaPredicted RBP11.07□□□□□ -0.64
CLCN3-205ENST00000506924 ERCC3P19447 782 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 CYP2B6P20813 491 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 MAPK4P31152 587 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 STAT2P52630 851 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 CCNA1P78396 465 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 SEC23AQ15436 765 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 TRIP4Q15650 581 aaPredicted RBP11.07□□□□□ -0.64
CLCN3-205ENST00000506924 ADCK5Q3MIX3 580 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 CCDC178Q5BJE1 867 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 TMEM67Q5HYA8 995 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 CCDC174Q6PII3 467 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 PLEKHH3Q7Z736 793 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 MB21D2Q8IYB1 491 aaPredicted RBP11.07□□□□□ -0.64
CLCN3-205ENST00000506924 REPS2Q8NFH8 660 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 DCAF4Q8WV16 495 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 TCEANC2Q96MN5 208 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 FAM129BQ96TA1 746 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 SLC30A3Q99726 388 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 UBA5Q9GZZ9 404 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 ADAMTS5Q9UNA0 930 aa11.07□□□□□ -0.64
CLCN3-205ENST00000506924 A0A0G2JMZ2 1700 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 ERICH2A1L162 156 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 REC8O95072 547 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 CPA1P15085 419 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 ADH6P28332 368 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 STAT3P40763 770 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 WTAPQ15007 396 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 SLC9C1Q4G0N8 1177 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 SNRNP48Q6IEG0 339 aaKnown RBP11.06□□□□□ -0.64
CLCN3-205ENST00000506924 FAM160B2Q86V87 743 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 RAB11FIP4Q86YS3 637 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 GOLGA6L1Q8N7Z2 621 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 MB21D1Q8N884 522 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 CHURC1Q8WUH1 139 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 ANKS1AQ92625 1134 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 DMRTB1Q96MA1 342 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 CNTNAP3BQ96NU0 1288 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 PNMA5Q96PV4 448 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 CNTNAP3Q9BZ76 1288 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 GJD2Q9UKL4 321 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 ZNF214Q9UL59 606 aaPredicted RBP11.06□□□□□ -0.64
CLCN3-205ENST00000506924 RIPK3Q9Y572 518 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.06□□□□□ -0.64
CLCN3-205ENST00000506924 PLXNB2O15031 1838 aa11.06□□□□□ -0.64
CLCN3-205ENST00000506924 ADCY3O60266 1144 aa11.05□□□□□ -0.64
CLCN3-205ENST00000506924 ZKSCAN1P17029 563 aaPredicted RBP11.05□□□□□ -0.64
CLCN3-205ENST00000506924 GRK4P32298 578 aa11.05□□□□□ -0.64
CLCN3-205ENST00000506924 MCM5P33992 734 aa11.05□□□□□ -0.64
CLCN3-205ENST00000506924 HSPA4P34932 840 aa11.05□□□□□ -0.64
CLCN3-205ENST00000506924 PRMT2P55345 433 aa11.05□□□□□ -0.64
CLCN3-205ENST00000506924 SOX10P56693 466 aa11.05□□□□□ -0.64
CLCN3-205ENST00000506924 ZNF543Q08ER8 600 aa11.05□□□□□ -0.64
CLCN3-205ENST00000506924 IGDCC4Q8TDY8 1250 aa11.05□□□□□ -0.64
CLCN3-205ENST00000506924 NEK1Q96PY6 1258 aa11.05□□□□□ -0.64
CLCN3-205ENST00000506924 MYL10Q9BUA6 226 aa11.05□□□□□ -0.64
CLCN3-205ENST00000506924 SLC38A10Q9HBR0 1119 aa11.05□□□□□ -0.64
CLCN3-205ENST00000506924 VAT1LQ9HCJ6 419 aa11.05□□□□□ -0.64
CLCN3-205ENST00000506924 HOMER2Q9NSB8 354 aa11.05□□□□□ -0.64
CLCN3-205ENST00000506924 USP20Q9Y2K6 914 aa11.05□□□□□ -0.64
CLCN3-205ENST00000506924 SNX14Q9Y5W7 946 aa11.05□□□□□ -0.64
CLCN3-205ENST00000506924 HTTP42858 3142 aa11.04□□□□□ -0.64
CLCN3-205ENST00000506924 SNHG28P0DPA3 235 aa11.04□□□□□ -0.64
CLCN3-205ENST00000506924 HOXD8P13378 290 aaPredicted RBP11.04□□□□□ -0.64
CLCN3-205ENST00000506924 NT5C2P49902 561 aa11.04□□□□□ -0.64
CLCN3-205ENST00000506924 MARSP56192 900 aaKnown RBP11.04□□□□□ -0.64
CLCN3-205ENST00000506924 SART3Q15020 963 aaKnown RBP11.04□□□□□ -0.64
CLCN3-205ENST00000506924 CCL14Q16627 93 aa11.04□□□□□ -0.64
CLCN3-205ENST00000506924 SYDE2Q5VT97 1194 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms