RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 AGPAT5Q9NUQ2 364 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 MAGEC2Q9UBF1 373 aaPredicted RBP13.55□□□□□ -0.24
LIN54-206ENST00000506560 DNM3Q9UQ16 869 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 DICER1Q9UPY3 1922 aaKnown RBP13.55□□□□□ -0.24
LIN54-206ENST00000506560 IPO5O00410 1097 aaKnown RBP13.55□□□□□ -0.24
LIN54-206ENST00000506560 EPHB6O15197 1021 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 SYCP1Q15431 976 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 ZCWPW2Q504Y3 356 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 COBLL1Q53SF7 1204 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 TRIM65Q6PJ69 517 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 APOBEC3FQ8IUX4 373 aaKnown RBP13.55□□□□□ -0.24
LIN54-206ENST00000506560 MYOCDQ8IZQ8 938 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 SYT2Q8N9I0 419 aaPredicted RBP13.55□□□□□ -0.24
LIN54-206ENST00000506560 ERMNQ8TAM6 284 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 CHP1Q99653 195 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 NOC4LQ9BVI4 516 aaKnown RBP13.55□□□□□ -0.24
LIN54-206ENST00000506560 SPON1Q9HCB6 807 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 RNF181Q9P0P0 153 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 ITIH6Q6UXX5 1313 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 MYBP10242 640 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 HOXD13P35453 343 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 KRT9P35527 623 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 KCNJ6P48051 423 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 ITGB3BPQ13352 177 aaPredicted RBP13.54□□□□□ -0.24
LIN54-206ENST00000506560 MOB2Q70IA6 237 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 TRERF1Q96PN7 1200 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 PANX2Q96RD6 677 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 MXRA8Q9BRK3 442 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 ABHD10Q9NUJ1 306 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 RPTORQ8N122 1335 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 FRMD3A2A2Y4 597 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 NRDCO43847 1150 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 MYCLP12524 364 aaPredicted RBP13.54□□□□□ -0.24
LIN54-206ENST00000506560 TBC1D8BQ0IIM8 1120 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 KSR1Q8IVT5 923 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 ACRBPQ8NEB7 543 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 BMP2KQ9NSY1 1161 aaPredicted RBP13.54□□□□□ -0.24
LIN54-206ENST00000506560 RABGAP1Q9Y3P9 1069 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 TELO2Q9Y4R8 837 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 TMEM150BA6NC51 233 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 ATP9AO75110 1047 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 USP2O75604 605 aaPredicted RBP13.54□□□□□ -0.24
LIN54-206ENST00000506560 PRPF6O94906 941 aaKnown RBP13.54□□□□□ -0.24
LIN54-206ENST00000506560 TRAF1Q13077 416 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 SEMA3FQ13275 785 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 PPP2R5CQ13362 524 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 RINT1Q6NUQ1 792 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.54□□□□□ -0.24
LIN54-206ENST00000506560 CCDC65Q8IXS2 484 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 LRRN4CLQ8ND94 238 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 REPS2Q8NFH8 660 aa13.54□□□□□ -0.24
LIN54-206ENST00000506560 POLR3CQ9BUI4 534 aaPredicted RBP13.54□□□□□ -0.24
LIN54-206ENST00000506560 TRAF5O00463 557 aa13.53□□□□□ -0.24
LIN54-206ENST00000506560 DHX15O43143 795 aaKnown RBP13.53□□□□□ -0.24
LIN54-206ENST00000506560 APBA1Q02410 837 aa13.53□□□□□ -0.24
LIN54-206ENST00000506560 BAATQ14032 418 aaPredicted RBP13.53□□□□□ -0.24
LIN54-206ENST00000506560 B3GNT9Q6UX72 402 aa13.53□□□□□ -0.24
LIN54-206ENST00000506560 KCTD10Q9H3F6 313 aa13.53□□□□□ -0.24
LIN54-206ENST00000506560 RNF146Q9NTX7 359 aa13.53□□□□□ -0.24
LIN54-206ENST00000506560 TFR2Q9UP52 801 aa13.53□□□□□ -0.24
LIN54-206ENST00000506560 VGLL4Q14135 290 aa13.53□□□□□ -0.24
LIN54-206ENST00000506560 TMEM132BQ14DG7 1078 aa13.53□□□□□ -0.24
LIN54-206ENST00000506560 TKFCQ3LXA3 575 aa13.53□□□□□ -0.24
LIN54-206ENST00000506560 SNRNP48Q6IEG0 339 aaKnown RBP13.53□□□□□ -0.24
LIN54-206ENST00000506560 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.53□□□□□ -0.24
LIN54-206ENST00000506560 WDR24Q96S15 920 aa13.53□□□□□ -0.24
LIN54-206ENST00000506560 SYT17Q9BSW7 474 aa13.53□□□□□ -0.24
LIN54-206ENST00000506560 LRRC27Q9C0I9 530 aa13.53□□□□□ -0.24
LIN54-206ENST00000506560 DNAI1Q9UI46 699 aa13.53□□□□□ -0.24
LIN54-206ENST00000506560 ZNF214Q9UL59 606 aaPredicted RBP13.53□□□□□ -0.24
LIN54-206ENST00000506560 EYA4O95677 639 aa13.52□□□□□ -0.24
LIN54-206ENST00000506560 USP14P54578 494 aa13.52□□□□□ -0.24
LIN54-206ENST00000506560 PSMD2Q13200 908 aa13.52□□□□□ -0.24
LIN54-206ENST00000506560 PGM5Q15124 567 aa13.52□□□□□ -0.24
LIN54-206ENST00000506560 NOC3LQ8WTT2 800 aaKnown RBP13.52□□□□□ -0.24
LIN54-206ENST00000506560 LXNQ9BS40 222 aa13.52□□□□□ -0.24
LIN54-206ENST00000506560 TTYH3Q9C0H2 523 aa13.52□□□□□ -0.24
LIN54-206ENST00000506560 ZMYND15Q9H091 742 aa13.52□□□□□ -0.24
LIN54-206ENST00000506560 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.52□□□□□ -0.24
LIN54-206ENST00000506560 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.52□□□□□ -0.24
LIN54-206ENST00000506560 V9GYY5 206 aaPredicted RBP13.52□□□□□ -0.24
LIN54-206ENST00000506560 SORBS3O60504 671 aa13.52□□□□□ -0.25
LIN54-206ENST00000506560 ZBED4O75132 1171 aa13.52□□□□□ -0.25
LIN54-206ENST00000506560 TREML2Q5T2D2 321 aa13.52□□□□□ -0.25
LIN54-206ENST00000506560 WDR59Q6PJI9 974 aa13.52□□□□□ -0.25
LIN54-206ENST00000506560 RNF207Q6ZRF8 634 aa13.52□□□□□ -0.25
LIN54-206ENST00000506560 MAEAQ7L5Y9 396 aa13.52□□□□□ -0.25
LIN54-206ENST00000506560 CNGA4Q8IV77 575 aa13.52□□□□□ -0.25
LIN54-206ENST00000506560 SMCR8Q8TEV9 937 aaPredicted RBP13.52□□□□□ -0.25
LIN54-206ENST00000506560 RMDN3Q96TC7 470 aa13.52□□□□□ -0.25
LIN54-206ENST00000506560 ARID3AQ99856 593 aa13.52□□□□□ -0.25
LIN54-206ENST00000506560 R3HDMLQ9H3Y0 253 aa13.52□□□□□ -0.25
LIN54-206ENST00000506560 LZTFL1Q9NQ48 299 aa13.52□□□□□ -0.25
LIN54-206ENST00000506560 AFG3L2Q9Y4W6 797 aa13.52□□□□□ -0.25
LIN54-206ENST00000506560 CTDP1Q9Y5B0 961 aaPredicted RBP13.52□□□□□ -0.25
LIN54-206ENST00000506560 ADGRG1Q9Y653 693 aa13.52□□□□□ -0.25
LIN54-206ENST00000506560 SNCAIPQ9Y6H5 919 aa13.52□□□□□ -0.25
LIN54-206ENST00000506560 NMT1P30419 496 aaKnown RBP13.51□□□□□ -0.25
LIN54-206ENST00000506560 DNM2P50570 870 aa13.51□□□□□ -0.25
LIN54-206ENST00000506560 LRRC63Q05C16 580 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms