RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 OXR1Q8N573 874 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 CHST14Q8NCH0 376 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 FEZF2Q8TBJ5 459 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 FRS2Q8WU20 508 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 Q96M66 194 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 GPR101Q96P66 508 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 RHOBTB2Q9BYZ6 727 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 CELF4Q9BZC1 486 aaKnown RBP5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 DUSP15Q9H1R2 295 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 ZNF552Q9H707 407 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 TCF7L1Q9HCS4 588 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 GCM1Q9NP62 436 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 PRDM11Q9NQV5 511 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 B4GALT6Q9UBX8 382 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 IP6K2Q9UHH9 426 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 DUSP13Q9UII6 198 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 PALD1Q9ULE6 856 aa5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 PNMA8BQ9ULN7 279 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 LUC7L2Q9Y383 392 aaKnown RBP5.02□□□□□ -1.61
TRAPPC13-208ENST00000505553 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 ZC3H12DA2A288 527 aaKnown RBP5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 WASH4PA8MWX3 477 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 AURKAO14965 403 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 AKAP8O43823 692 aaKnown RBP5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 CREB3O43889 395 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 LRRN2O75325 713 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 PRAMEF1O95521 474 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 CFBP00751 764 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 CD3EP07766 207 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 MYBL2P10244 700 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 SEPHS1P49903 392 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 AFF3P51826 1226 aaKnown RBP5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 SESN3P58005 492 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 CYP4F3Q08477 520 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 ARHGAP44Q17R89 818 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 KIZQ2M2Z5 673 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 SYCP2LQ5T4T6 812 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 LBX2Q6XYB7 198 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 TMC3Q7Z5M5 1100 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 ZDHHC14Q8IZN3 488 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 PDZD8Q8NEN9 1154 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 NPLOC4Q8TAT6 608 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 AHCYL2Q96HN2 611 aaKnown RBP5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 FUBP3Q96I24 572 aaKnown RBP eCLIP5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 GPR62Q9BZJ7 368 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 EMC7Q9NPA0 242 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 THG1LQ9NWX6 298 aaKnown RBP5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 ANKRD6Q9Y2G4 727 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 IRAK3Q9Y616 596 aa5.01□□□□□ -1.61
TRAPPC13-208ENST00000505553 TRBV23OR9-2A0A075B6M9 112 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 OVOL3O00110 214 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 STXBP3O00186 592 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 TRAF5O00463 557 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 LDHAP00338 332 aaKnown RBP5□□□□□ -1.61
TRAPPC13-208ENST00000505553 SRGAP2CP0DJJ0 459 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 VCAM1P19320 739 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 PI3P19957 117 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 LTKP29376 864 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 TRHRP34981 398 aaPredicted RBP5□□□□□ -1.61
TRAPPC13-208ENST00000505553 PDE6BP35913 854 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 RECQLP46063 649 aaPredicted RBP5□□□□□ -1.61
TRAPPC13-208ENST00000505553 ST5P78524 1137 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 PURAQ00577 322 aaKnown RBP5□□□□□ -1.61
TRAPPC13-208ENST00000505553 EGR3Q06889 387 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 KLF1Q13351 362 aaPredicted RBP5□□□□□ -1.61
TRAPPC13-208ENST00000505553 SSPNQ14714 243 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 CLEC16AQ2KHT3 1053 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 ABCB5Q2M3G0 1257 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 MINDY4Q4G0A6 757 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 TMEM177Q53S58 311 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 EEF1DP3Q658K8 133 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 HDGFL2Q7Z4V5 671 aaPredicted RBP5□□□□□ -1.61
TRAPPC13-208ENST00000505553 TSPYL5Q86VY4 417 aaPredicted RBP5□□□□□ -1.61
TRAPPC13-208ENST00000505553 DTWD2Q8NBA8 298 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 DAGLBQ8NCG7 672 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 PCDH19Q8TAB3 1148 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 DIO2Q92813 273 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 INTS4Q96HW7 963 aaKnown RBP5□□□□□ -1.61
TRAPPC13-208ENST00000505553 SIGLEC10Q96LC7 697 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 SGPP1Q9BX95 441 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 GPRC5CQ9NQ84 441 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 SRRDQ9UH36 339 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 ZNF652Q9Y2D9 606 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 GIT1Q9Y2X7 761 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 MRFAP1Q9Y605 127 aa5□□□□□ -1.61
TRAPPC13-208ENST00000505553 RBAK-RBAKDNI3L0D1 243 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 MEIS1O00470 390 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 WNT9AO14904 365 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 CKMP06732 381 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 CYP2C19P33261 490 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 BMP8BP34820 402 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 ERVK-21P61565 698 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 KRT85P78386 507 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 RBM10P98175 930 aaKnown RBP4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 GAB4Q2WGN9 574 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 INAVAQ3KP66 663 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 RCSD1Q6JBY9 416 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 PNMA8AQ86V59 439 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 CBARPQ8N350 705 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 ZNF655Q8N720 491 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms