RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 SMIM10L2AP0DMW4 78 aa14.75□□□□□ -0.05
LSM6-204ENST00000504181 SMIM10L2BP0DMW5 78 aa14.75□□□□□ -0.05
LSM6-204ENST00000504181 GHRP10912 638 aa14.75□□□□□ -0.05
LSM6-204ENST00000504181 ZSCAN25Q6NSZ9 544 aa14.75□□□□□ -0.05
LSM6-204ENST00000504181 LLGL2Q6P1M3 1020 aa14.75□□□□□ -0.05
LSM6-204ENST00000504181 SYCE2Q6PIF2 218 aa14.75□□□□□ -0.05
LSM6-204ENST00000504181 DCAF4Q8WV16 495 aa14.75□□□□□ -0.05
LSM6-204ENST00000504181 RUBCNQ92622 972 aa14.75□□□□□ -0.05
LSM6-204ENST00000504181 CHAMP1Q96JM3 812 aa14.75□□□□□ -0.05
LSM6-204ENST00000504181 GPCPD1Q9NPB8 672 aa14.75□□□□□ -0.05
LSM6-204ENST00000504181 MRVI1Q9Y6F6 885 aa14.75□□□□□ -0.05
LSM6-204ENST00000504181 ENPP3O14638 875 aa14.74□□□□□ -0.05
LSM6-204ENST00000504181 ANP32CO43423 234 aa14.74□□□□□ -0.05
LSM6-204ENST00000504181 APPP05067 770 aa14.74□□□□□ -0.05
LSM6-204ENST00000504181 SRGAP2BP0DMP2 458 aa14.74□□□□□ -0.05
LSM6-204ENST00000504181 HOXD8P13378 290 aaPredicted RBP14.74□□□□□ -0.05
LSM6-204ENST00000504181 HOXC8P31273 242 aa14.74□□□□□ -0.05
LSM6-204ENST00000504181 STXBP2Q15833 593 aa14.74□□□□□ -0.05
LSM6-204ENST00000504181 HSDL1Q3SXM5 330 aa14.74□□□□□ -0.05
LSM6-204ENST00000504181 USH1GQ495M9 461 aa14.74□□□□□ -0.05
LSM6-204ENST00000504181 CEP85Q6P2H3 762 aa14.74□□□□□ -0.05
LSM6-204ENST00000504181 BTNL9Q6UXG8 535 aa14.74□□□□□ -0.05
LSM6-204ENST00000504181 CMTR2Q8IYT2 770 aaKnown RBP14.74□□□□□ -0.05
LSM6-204ENST00000504181 TAAR1Q96RJ0 339 aa14.74□□□□□ -0.05
LSM6-204ENST00000504181 CDCA3Q99618 268 aaPredicted RBP14.74□□□□□ -0.05
LSM6-204ENST00000504181 C16orf70Q9BSU1 422 aa14.74□□□□□ -0.05
LSM6-204ENST00000504181 RNPEPQ9H4A4 650 aa14.74□□□□□ -0.05
LSM6-204ENST00000504181 POMKQ9H5K3 350 aa14.74□□□□□ -0.05
LSM6-204ENST00000504181 CACNA1IQ9P0X4 2223 aa14.74□□□□□ -0.05
LSM6-204ENST00000504181 FSD2A1L4K1 749 aa14.73□□□□□ -0.05
LSM6-204ENST00000504181 PPFIA4O75335 1185 aa14.73□□□□□ -0.05
LSM6-204ENST00000504181 NPR3P17342 541 aa14.73□□□□□ -0.05
LSM6-204ENST00000504181 FAM26DQ5JW98 314 aa14.73□□□□□ -0.05
LSM6-204ENST00000504181 RIN2Q8WYP3 895 aaPredicted RBP14.73□□□□□ -0.05
LSM6-204ENST00000504181 TBC1D5Q92609 795 aa14.73□□□□□ -0.05
LSM6-204ENST00000504181 SPATA33Q96N06 139 aa14.73□□□□□ -0.05
LSM6-204ENST00000504181 RTP3Q9BQQ7 232 aa14.73□□□□□ -0.05
LSM6-204ENST00000504181 IL17RBQ9NRM6 502 aa14.73□□□□□ -0.05
LSM6-204ENST00000504181 PATJQ8NI35 1801 aa14.73□□□□□ -0.05
LSM6-204ENST00000504181 TSPY2A6NKD2 308 aa14.72□□□□□ -0.05
LSM6-204ENST00000504181 ATP5JP18859 108 aa14.72□□□□□ -0.05
LSM6-204ENST00000504181 ATXN1P54253 815 aaKnown RBP14.72□□□□□ -0.05
LSM6-204ENST00000504181 ERVFC1P60507 584 aa14.72□□□□□ -0.05
LSM6-204ENST00000504181 KCNC3Q14003 757 aa14.72□□□□□ -0.05
LSM6-204ENST00000504181 PPP4R3BQ5MIZ7 849 aa14.72□□□□□ -0.05
LSM6-204ENST00000504181 KIAA0319Q5VV43 1072 aa14.72□□□□□ -0.05
LSM6-204ENST00000504181 NSUN6Q8TEA1 469 aaKnown RBP14.72□□□□□ -0.05
LSM6-204ENST00000504181 OSBP2Q969R2 916 aa14.72□□□□□ -0.05
LSM6-204ENST00000504181 COL20A1Q9P218 1284 aa14.72□□□□□ -0.05
LSM6-204ENST00000504181 SUPT16HQ9Y5B9 1047 aaKnown RBP14.72□□□□□ -0.05
LSM6-204ENST00000504181 FASNP49327 2511 aaKnown RBP14.71□□□□□ -0.05
LSM6-204ENST00000504181 WDR19Q8NEZ3 1342 aa14.71□□□□□ -0.05
LSM6-204ENST00000504181 H3BRB1 525 aa14.71□□□□□ -0.05
LSM6-204ENST00000504181 GPAA1O43292 621 aa14.71□□□□□ -0.05
LSM6-204ENST00000504181 CHRNA1P02708 482 aa14.71□□□□□ -0.05
LSM6-204ENST00000504181 EIF2AK2P19525 551 aaKnown RBP14.71□□□□□ -0.05
LSM6-204ENST00000504181 GATMP50440 423 aa14.71□□□□□ -0.05
LSM6-204ENST00000504181 LPIN1Q14693 890 aa14.71□□□□□ -0.05
LSM6-204ENST00000504181 HSP90AB4PQ58FF6 505 aa14.71□□□□□ -0.05
LSM6-204ENST00000504181 MYSM1Q5VVJ2 828 aa14.71□□□□□ -0.05
LSM6-204ENST00000504181 PLPP4Q5VZY2 271 aa14.71□□□□□ -0.05
LSM6-204ENST00000504181 TMEM184AQ6ZMB5 413 aa14.71□□□□□ -0.05
LSM6-204ENST00000504181 LINC01599Q8WXQ3 324 aa14.71□□□□□ -0.05
LSM6-204ENST00000504181 COL26A1Q96A83 441 aa14.71□□□□□ -0.05
LSM6-204ENST00000504181 RMDN3Q96TC7 470 aa14.71□□□□□ -0.05
LSM6-204ENST00000504181 TUT1Q9H6E5 874 aaKnown RBP14.71□□□□□ -0.05
LSM6-204ENST00000504181 SETD4Q9NVD3 440 aa14.71□□□□□ -0.05
LSM6-204ENST00000504181 LIMD1Q9UGP4 676 aa14.71□□□□□ -0.05
LSM6-204ENST00000504181 RALGAPA1Q6GYQ0 2036 aa14.71□□□□□ -0.05
LSM6-204ENST00000504181 GGPS1O95749 300 aa14.7□□□□□ -0.06
LSM6-204ENST00000504181 ACAP1Q15027 740 aa14.7□□□□□ -0.06
LSM6-204ENST00000504181 IFNL3Q8IZI9 196 aa14.7□□□□□ -0.06
LSM6-204ENST00000504181 TDRD5Q8NAT2 981 aaKnown RBP14.7□□□□□ -0.06
LSM6-204ENST00000504181 SYTL5Q8TDW5 730 aaPredicted RBP14.7□□□□□ -0.06
LSM6-204ENST00000504181 KIF1BPQ96EK5 621 aa14.7□□□□□ -0.06
LSM6-204ENST00000504181 IWS1Q96ST2 819 aa14.7□□□□□ -0.06
LSM6-204ENST00000504181 EHMT1Q9H9B1 1298 aa14.7□□□□□ -0.06
LSM6-204ENST00000504181 ERVK-5Q9HDB9 667 aa14.7□□□□□ -0.06
LSM6-204ENST00000504181 PNMA2Q9UL42 364 aa14.7□□□□□ -0.06
LSM6-204ENST00000504181 SETXQ7Z333 2677 aaKnown RBP14.69□□□□□ -0.06
LSM6-204ENST00000504181 LGALS2P05162 132 aa14.69□□□□□ -0.06
LSM6-204ENST00000504181 SLC3A2P08195 630 aaKnown RBP14.69□□□□□ -0.06
LSM6-204ENST00000504181 HOXB3P14651 431 aaPredicted RBP14.69□□□□□ -0.06
LSM6-204ENST00000504181 HOXB8P17481 243 aaPredicted RBP14.69□□□□□ -0.06
LSM6-204ENST00000504181 UBE3AQ05086 875 aa14.69□□□□□ -0.06
LSM6-204ENST00000504181 PPARAQ07869 468 aa14.69□□□□□ -0.06
LSM6-204ENST00000504181 APOBRQ0VD83 1088 aa14.69□□□□□ -0.06
LSM6-204ENST00000504181 CELF3Q5SZQ8 465 aaKnown RBP14.69□□□□□ -0.06
LSM6-204ENST00000504181 SPOUT1Q5T280 376 aaKnown RBP14.69□□□□□ -0.06
LSM6-204ENST00000504181 ARHGEF16Q5VV41 709 aa14.69□□□□□ -0.06
LSM6-204ENST00000504181 CES5AQ6NT32 575 aa14.69□□□□□ -0.06
LSM6-204ENST00000504181 ZC3H14Q6PJT7 736 aaKnown RBP14.69□□□□□ -0.06
LSM6-204ENST00000504181 NPAS4Q8IUM7 802 aa14.69□□□□□ -0.06
LSM6-204ENST00000504181 ITPRIPQ8IWB1 547 aa14.69□□□□□ -0.06
LSM6-204ENST00000504181 SIX5Q8N196 739 aa14.69□□□□□ -0.06
LSM6-204ENST00000504181 RGS22Q8NE09 1264 aa14.69□□□□□ -0.06
LSM6-204ENST00000504181 FBXL21Q9UKT6 434 aa14.69□□□□□ -0.06
LSM6-204ENST00000504181 PCDHB12Q9Y5F1 795 aa14.69□□□□□ -0.06
LSM6-204ENST00000504181 DCDC2BA2VCK2 349 aa14.68□□□□□ -0.06
LSM6-204ENST00000504181 M0R2C6 588 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms