RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 ACTRT1Q8TDG2 376 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 SCFD1Q8WVM8 642 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 ISCUQ9H1K1 167 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 PLEKHA4Q9H4M7 779 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 EMILIN3Q9NT22 766 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 TRAF3IP3Q9Y228 551 aa16.46■□□□□ 0.22
SNF8-203ENST00000504000 ATF5Q9Y2D1 282 aaPredicted RBP16.46■□□□□ 0.22
SNF8-203ENST00000504000 CETN3O15182 167 aa16.45■□□□□ 0.22
SNF8-203ENST00000504000 GNPATO15228 680 aa16.45■□□□□ 0.22
SNF8-203ENST00000504000 TTLL1O95922 423 aa16.45■□□□□ 0.22
SNF8-203ENST00000504000 PLA2G4BP0C869 781 aa16.45■□□□□ 0.22
SNF8-203ENST00000504000 PRKCIP41743 596 aa16.45■□□□□ 0.22
SNF8-203ENST00000504000 TNNI2P48788 182 aa16.45■□□□□ 0.22
SNF8-203ENST00000504000 ICE2Q659A1 982 aa16.45■□□□□ 0.22
SNF8-203ENST00000504000 YTHDF3Q7Z739 585 aaKnown RBP16.45■□□□□ 0.22
SNF8-203ENST00000504000 CERKQ8TCT0 537 aa16.45■□□□□ 0.22
SNF8-203ENST00000504000 SCFD2Q8WU76 684 aa16.45■□□□□ 0.22
SNF8-203ENST00000504000 PIK3R5Q8WYR1 880 aa16.45■□□□□ 0.22
SNF8-203ENST00000504000 ARHGEF1Q92888 912 aaKnown RBP16.45■□□□□ 0.22
SNF8-203ENST00000504000 CCDC43Q96MW1 224 aaKnown RBP16.45■□□□□ 0.22
SNF8-203ENST00000504000 MBOAT7Q96N66 472 aa16.45■□□□□ 0.22
SNF8-203ENST00000504000 MXD3Q9BW11 206 aa16.45■□□□□ 0.22
SNF8-203ENST00000504000 TAF1DQ9H5J8 278 aaPredicted RBP16.45■□□□□ 0.22
SNF8-203ENST00000504000 KCNMB3Q9NPA1 279 aa16.45■□□□□ 0.22
SNF8-203ENST00000504000 SUGT1Q9Y2Z0 365 aa16.45■□□□□ 0.22
SNF8-203ENST00000504000 STK24Q9Y6E0 443 aa16.45■□□□□ 0.22
SNF8-203ENST00000504000 FRMPD2Q68DX3 1309 aaPredicted RBP16.44■□□□□ 0.22
SNF8-203ENST00000504000 ZBTB5O15062 677 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 ADAM9Q13443 819 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 MCTP2Q6DN12 878 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 DPY19L2P1Q6NXN4 242 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 IRF2BP2Q7Z5L9 587 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 ADGRF4Q8IZF3 695 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 TAF4BQ92750 862 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 ZFP91Q96JP5 570 aaPredicted RBP16.44■□□□□ 0.22
SNF8-203ENST00000504000 HINFPQ9BQA5 517 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 ADAMTS1Q9UHI8 967 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 ERLIN2O94905 339 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 CYP11B2P19099 503 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 RAPGEF1Q13905 1077 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 RPS6KA1Q15418 735 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 SLFN12Q8IYM2 578 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 KCTD17Q8N5Z5 321 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 CASKIN2Q8WXE0 1202 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 ATP6V1G3Q96LB4 118 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 KRT12Q99456 494 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 EPN3Q9H201 632 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 INTUQ9ULD6 942 aa16.44■□□□□ 0.22
SNF8-203ENST00000504000 KIF13BQ9NQT8 1826 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 A0A0A6YYK5 440 aaPredicted RBP16.43■□□□□ 0.22
SNF8-203ENST00000504000 CCDC188H7C350 402 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 NDUFAB1O14561 156 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 PPP1R11O60927 126 aaPredicted RBP16.43■□□□□ 0.22
SNF8-203ENST00000504000 FTCDO95954 541 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 KRT14P02533 472 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 FAM153BP0C7A2 387 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 GPSM2P81274 684 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 KCNH2Q12809 1159 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 FAM153CQ494X1 144 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 CRY2Q49AN0 593 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 HERC4Q5GLZ8 1057 aaPredicted RBP16.43■□□□□ 0.22
SNF8-203ENST00000504000 MFSD14BQ5SR56 506 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 MMS22LQ6ZRQ5 1243 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 MICALCLQ6ZW33 695 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 CCDC24Q8N4L8 307 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 ARFGAP2Q8N6H7 521 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 C3orf20Q8ND61 904 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 PSTPIP2Q9H939 334 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 FAM153AQ9UHL3 310 aa16.43■□□□□ 0.22
SNF8-203ENST00000504000 VGLL3A8MV65 326 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 MARCH6O60337 910 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 KIF4AO95239 1232 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 LSP1P33241 339 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 EPS15P42566 896 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 SLC12A3P55017 1021 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 NPEPPSP55786 919 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 MRPS25P82663 173 aaKnown RBP16.42■□□□□ 0.22
SNF8-203ENST00000504000 FAM133AQ8N9E0 248 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 LRRC57Q8N9N7 239 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 LMBR1Q8WVP7 490 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 IFT81Q8WYA0 676 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 GGA1Q9UJY5 639 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 NENFQ9UMX5 172 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 KIAA1024Q9UPX6 916 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 E9PMD0 336 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 PDXKO00764 312 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 TBX3O15119 743 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 RAD51CO43502 376 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 PPP1R37O75864 691 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 GFPT2O94808 682 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 ZBTB48P10074 688 aaPredicted RBP16.42■□□□□ 0.22
SNF8-203ENST00000504000 NR1D1P20393 614 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 TMC4Q7Z404 712 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 GPBP1Q86WP2 473 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 MICALL1Q8N3F8 863 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 CNBD1Q8NA66 436 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 LRRC45Q96CN5 670 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.42■□□□□ 0.22
SNF8-203ENST00000504000 EHD4Q9H223 541 aa16.42■□□□□ 0.22
SNF8-203ENST00000504000 METTL14Q9HCE5 456 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms