RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 PDHBP11177 359 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 ALOX15P16050 662 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 RPS6KB1P23443 525 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 GJA5P36382 358 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 ARHGAP25P42331 645 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 C1QTNF8P60827 252 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 BEND6Q5SZJ8 279 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 RGMBQ6NW40 437 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 BLOC1S2Q6QNY1 142 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 SPATS2Q86XZ4 545 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 CLEC10AQ8IUN9 316 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 IGDCC4Q8TDY8 1250 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 AFAP1L1Q8TED9 768 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 RABGGTAQ92696 567 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 CLIP3Q96DZ5 547 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 EPC1Q9H2F5 836 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 AS3MTQ9HBK9 375 aa10.59□□□□□ -0.71
PDLIM5-207ENST00000503974 SH2B2O14492 632 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 PRC1O43663 620 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 NMT2O60551 498 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 PEX14O75381 377 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 TTLL1O95922 423 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 SLC10A3P09131 477 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 HOXD11P31277 338 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 ENOX2Q16206 610 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 SH3D19Q5HYK7 790 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 NUGGCQ68CJ6 796 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 CCDC73Q6ZRK6 1079 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 RUFY3Q7L099 469 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 CCDC84Q86UT8 332 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 ENAHQ8N8S7 591 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 SLC43A3Q8NBI5 491 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 ZNF280CQ8ND82 737 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 OPTNQ96CV9 577 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 WNK4Q96J92 1243 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.58□□□□□ -0.724e-6■□□□□ 11.2
PDLIM5-207ENST00000503974 CARD6Q9BX69 1037 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 KIAA1683Q9H0B3 1180 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 ALDH8A1Q9H2A2 487 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 VCPKMTQ9H867 229 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 SLC40A1Q9NP59 571 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 MYO1AQ9UBC5 1043 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 TMX2Q9Y320 296 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 GMEB1Q9Y692 573 aa10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 BZW2Q9Y6E2 419 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-207ENST00000503974 A0A1W2PRG0 241 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 GOLGA6L9A6NEM1 432 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 FAM155AB1AL88 458 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 CXCL11O14625 94 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 MEFVO15553 781 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 MGRN1O60291 552 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 CCDC192P0DO97 292 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 EEF2P13639 858 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 LIFRP42702 1097 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 CLCN2P51788 898 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 PHEXP78562 749 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 SLMAPQ14BN4 828 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 SPRYD7Q5W111 196 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 YTHDF3Q7Z739 585 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 USP33Q8TEY7 942 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 SLC10A4Q96EP9 437 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 C12orf42Q96LP6 360 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 MPHOSPH6Q99547 160 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 UBAC1Q9BSL1 405 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 TRIM5Q9C035 493 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 ABT1Q9ULW3 272 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 ZHX2Q9Y6X8 837 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 PENKP01210 267 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 CPA1P15085 419 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 TRIM21P19474 475 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 ECE1P42892 770 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 DYNC1I2Q13409 638 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 SKIDA1Q1XH10 827 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 PPP1R15BQ5SWA1 713 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 B4GALNT4Q76KP1 1039 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 SGMS1Q86VZ5 419 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 SLC15A3Q8IY34 581 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 PEX5LQ8IYB4 626 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 MYO1HQ8N1T3 1032 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 GBP7Q8N8V2 638 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 ZBTB8BQ8NAP8 495 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 ACER1Q8TDN7 264 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 OTUD5Q96G74 571 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 ZKSCAN3Q9BRR0 538 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 CENPOQ9BU64 300 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 UBE2OQ9C0C9 1292 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 SLC7A5P2Q9GIP4 190 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 SH2D4AQ9H788 454 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 LY9Q9HBG7 655 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 CYP46A1Q9Y6A2 500 aa10.57□□□□□ -0.72
PDLIM5-207ENST00000503974 A0A0G2JLL6 359 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 TOP1P11387 765 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 ZFXP17010 805 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 HSPA6P17066 643 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 GNAQP50148 359 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 BACE1P56817 501 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 GUCY1B3Q02153 619 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 GNPTABQ3T906 1256 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 LARP1BQ659C4 914 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 CHST3Q7LGC8 479 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms