RNA–Protein interactions for RNA: ENST00000503534.5

CLPTM1L-204, Transcript of CLPTM1 like, humanhuman

TSL 2

Gene CLPTM1L, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-204ENST00000503534 ZNF215Q9UL58 517 aaPredicted RBP11.34□□□□□ -0.59
CLPTM1L-204ENST00000503534 SORCS3Q9UPU3 1222 aa11.34□□□□□ -0.59
CLPTM1L-204ENST00000503534 CACNA1HO95180 2353 aa11.34□□□□□ -0.59
CLPTM1L-204ENST00000503534 DHX16O60231 1041 aaKnown RBP11.33□□□□□ -0.6
CLPTM1L-204ENST00000503534 STAG3L1P0CL83 205 aa11.33□□□□□ -0.6
CLPTM1L-204ENST00000503534 SNHG28P0DPA3 235 aa11.33□□□□□ -0.6
CLPTM1L-204ENST00000503534 GHRP10912 638 aa11.33□□□□□ -0.6
CLPTM1L-204ENST00000503534 DNAJB1P25685 340 aa11.33□□□□□ -0.6
CLPTM1L-204ENST00000503534 ZMYM1Q5SVZ6 1142 aa11.33□□□□□ -0.6
CLPTM1L-204ENST00000503534 RSPH3Q86UC2 560 aa11.33□□□□□ -0.6
CLPTM1L-204ENST00000503534 KREMEN2Q8NCW0 462 aa11.33□□□□□ -0.6
CLPTM1L-204ENST00000503534 SUSD6Q92537 303 aa11.33□□□□□ -0.6
CLPTM1L-204ENST00000503534 CDCA3Q99618 268 aaPredicted RBP11.33□□□□□ -0.6
CLPTM1L-204ENST00000503534 ZBTB40Q9NUA8 1239 aa11.33□□□□□ -0.6
CLPTM1L-204ENST00000503534 SETD4Q9NVD3 440 aa11.33□□□□□ -0.6
CLPTM1L-204ENST00000503534 MRPL42Q9Y6G3 142 aaKnown RBP11.33□□□□□ -0.6
CLPTM1L-204ENST00000503534 PLXNA4Q9HCM2 1894 aa11.32□□□□□ -0.6
CLPTM1L-204ENST00000503534 KAT6AQ92794 2004 aa11.32□□□□□ -0.6
CLPTM1L-204ENST00000503534 PPFIA3O75145 1194 aa11.32□□□□□ -0.6
CLPTM1L-204ENST00000503534 FGRP09769 529 aa11.32□□□□□ -0.6
CLPTM1L-204ENST00000503534 GOLGA8HP0CJ92 632 aa11.32□□□□□ -0.6
CLPTM1L-204ENST00000503534 UBA1P22314 1058 aaKnown RBP11.32□□□□□ -0.6
CLPTM1L-204ENST00000503534 ARHGAP4P98171 946 aa11.32□□□□□ -0.6
CLPTM1L-204ENST00000503534 UBE3AQ05086 875 aa11.32□□□□□ -0.6
CLPTM1L-204ENST00000503534 ASTLQ6HA08 431 aaPredicted RBP11.32□□□□□ -0.6
CLPTM1L-204ENST00000503534 DGLUCYQ7Z3D6 616 aa11.32□□□□□ -0.6
CLPTM1L-204ENST00000503534 TMEM105Q8N8V8 129 aa11.32□□□□□ -0.6
CLPTM1L-204ENST00000503534 PDCD2LQ9BRP1 358 aa11.32□□□□□ -0.6
CLPTM1L-204ENST00000503534 UBA5Q9GZZ9 404 aa11.32□□□□□ -0.6
CLPTM1L-204ENST00000503534 MAP3K20Q9NYL2 800 aaKnown RBP11.32□□□□□ -0.6
CLPTM1L-204ENST00000503534 PCDHB12Q9Y5F1 795 aa11.32□□□□□ -0.6
CLPTM1L-204ENST00000503534 TTC3P53804 2025 aa11.31□□□□□ -0.6
CLPTM1L-204ENST00000503534 FAM186AA6NE01 2351 aa11.31□□□□□ -0.6
CLPTM1L-204ENST00000503534 CCND2P30279 289 aa11.31□□□□□ -0.6
CLPTM1L-204ENST00000503534 GNPTABQ3T906 1256 aa11.31□□□□□ -0.6
CLPTM1L-204ENST00000503534 PAN2Q504Q3 1202 aaKnown RBP11.31□□□□□ -0.6
CLPTM1L-204ENST00000503534 TSHZ3Q63HK5 1081 aa11.31□□□□□ -0.6
CLPTM1L-204ENST00000503534 PDE12Q6L8Q7 609 aaKnown RBP11.31□□□□□ -0.6
CLPTM1L-204ENST00000503534 TAF2Q6P1X5 1199 aa11.31□□□□□ -0.6
CLPTM1L-204ENST00000503534 NPAS4Q8IUM7 802 aa11.31□□□□□ -0.6
CLPTM1L-204ENST00000503534 ADGRF4Q8IZF3 695 aa11.31□□□□□ -0.6
CLPTM1L-204ENST00000503534 FTHL17Q9BXU8 183 aa11.31□□□□□ -0.6
CLPTM1L-204ENST00000503534 EHMT1Q9H9B1 1298 aa11.31□□□□□ -0.6
CLPTM1L-204ENST00000503534 TSHZ2Q9NRE2 1034 aa11.31□□□□□ -0.6
CLPTM1L-204ENST00000503534 AAASQ9NRG9 546 aa11.31□□□□□ -0.6
CLPTM1L-204ENST00000503534 LRFN2Q9ULH4 789 aa11.31□□□□□ -0.6
CLPTM1L-204ENST00000503534 NRCAMQ92823 1304 aa11.31□□□□□ -0.6
CLPTM1L-204ENST00000503534 MED19A0JLT2 244 aaPredicted RBP11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 PER2O15055 1255 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 RGS20O76081 388 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 CHRNA1P02708 482 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 SP100P23497 879 aaPredicted RBP11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 TECP42680 631 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 CLCN5P51795 746 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 SP2Q02086 613 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 NEDD9Q14511 834 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 LPIN1Q14693 890 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 PGM5Q15124 567 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 QRICH1Q2TAL8 776 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 SPOUT1Q5T280 376 aaKnown RBP11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 TSHZ1Q6ZSZ6 1077 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 VSIG10LQ86VR7 867 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 MIER1Q8N108 512 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 KCNG4Q8TDN1 519 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 ATP8B4Q8TF62 1192 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 LMBR1Q8WVP7 490 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 CPVLQ9H3G5 476 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 MYO15AQ9UKN7 3530 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 TTC41PQ6P2S7 1318 aa11.3□□□□□ -0.6
CLPTM1L-204ENST00000503534 RPLP2P05387 115 aaKnown RBP11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 PCP11498 1178 aaKnown RBP11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 HOXB8P17481 243 aaPredicted RBP11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 HSD17B4P51659 736 aa11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 ADAM17P78536 824 aa11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 ALX1Q15699 326 aa11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 DUSP6Q16828 381 aa11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 ASPRV1Q53RT3 343 aa11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 CCDC178Q5BJE1 867 aa11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 FBXO47Q5MNV8 452 aa11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 UTP14CQ5TAP6 766 aaKnown RBP11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 ANKRD54Q6NXT1 300 aa11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 MFSD6Q6ZSS7 791 aa11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 STOX1Q6ZVD7 989 aa11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 POTEDQ86YR6 584 aa11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 SAMD3Q8N6K7 520 aa11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 AMNQ9BXJ7 453 aa11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 RNF216Q9NWF9 866 aaPredicted RBP11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 PCDHGC5Q9Y5F6 944 aa11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 RIF1Q5UIP0 2472 aaKnown RBP11.29□□□□□ -0.6
CLPTM1L-204ENST00000503534 FOXP2O15409 715 aa11.28□□□□□ -0.6
CLPTM1L-204ENST00000503534 BRD1O95696 1058 aa11.28□□□□□ -0.6
CLPTM1L-204ENST00000503534 SCG2P13521 617 aa11.28□□□□□ -0.6
CLPTM1L-204ENST00000503534 PUM1Q14671 1186 aaKnown RBP eCLIP11.28□□□□□ -0.6
CLPTM1L-204ENST00000503534 TPRNQ4KMQ1 711 aa11.28□□□□□ -0.6
CLPTM1L-204ENST00000503534 CES5AQ6NT32 575 aa11.28□□□□□ -0.6
CLPTM1L-204ENST00000503534 TMEM184AQ6ZMB5 413 aa11.28□□□□□ -0.6
CLPTM1L-204ENST00000503534 CYFIP1Q7L576 1253 aa11.28□□□□□ -0.6
CLPTM1L-204ENST00000503534 PNMA1Q8ND90 353 aa11.28□□□□□ -0.6
CLPTM1L-204ENST00000503534 VN1R2Q8NFZ6 395 aa11.28□□□□□ -0.6
CLPTM1L-204ENST00000503534 RMDN1Q96DB5 314 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms