RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 AGBL1Q96MI9 1066 aa24.89■■□□□ 1.57
PCDH1-204ENST00000503492 MYO1AQ9UBC5 1043 aa24.89■■□□□ 1.57
PCDH1-204ENST00000503492 ZNF536O15090 1300 aa24.88■■□□□ 1.57
PCDH1-204ENST00000503492 EYA4O95677 639 aa24.88■■□□□ 1.57
PCDH1-204ENST00000503492 CDK17Q00537 523 aa24.88■■□□□ 1.57
PCDH1-204ENST00000503492 RUSC1Q9BVN2 902 aa24.88■■□□□ 1.57
PCDH1-204ENST00000503492 EHMT1Q9H9B1 1298 aa24.88■■□□□ 1.57
PCDH1-204ENST00000503492 RABGAP1Q9Y3P9 1069 aa24.88■■□□□ 1.57
PCDH1-204ENST00000503492 BRCA1P38398 1863 aaKnown RBP24.88■■□□□ 1.57
PCDH1-204ENST00000503492 CYLC1P35663 651 aaPredicted RBP24.88■■□□□ 1.57
PCDH1-204ENST00000503492 PPP2R5CQ13362 524 aa24.88■■□□□ 1.57
PCDH1-204ENST00000503492 CTTNQ14247 550 aaKnown RBP24.88■■□□□ 1.57
PCDH1-204ENST00000503492 CEP55Q53EZ4 464 aa24.88■■□□□ 1.57
PCDH1-204ENST00000503492 ZC3H3Q8IXZ2 948 aaKnown RBP24.88■■□□□ 1.57
PCDH1-204ENST00000503492 CCDC170Q8IYT3 715 aa24.88■■□□□ 1.57
PCDH1-204ENST00000503492 TFR2Q9UP52 801 aa24.88■■□□□ 1.57
PCDH1-204ENST00000503492 CTAGE9A4FU28 777 aa24.87■■□□□ 1.57
PCDH1-204ENST00000503492 RSPH10B2B2RC85 870 aa24.87■■□□□ 1.57
PCDH1-204ENST00000503492 RSPH10BP0C881 870 aa24.87■■□□□ 1.57
PCDH1-204ENST00000503492 H2AFXP16104 143 aaPredicted RBP24.87■■□□□ 1.57
PCDH1-204ENST00000503492 HNRNPH3P31942 346 aaKnown RBP24.87■■□□□ 1.57
PCDH1-204ENST00000503492 KCNMA1Q12791 1236 aa24.87■■□□□ 1.57
PCDH1-204ENST00000503492 TANGO6Q9C0B7 1094 aa24.87■■□□□ 1.57
PCDH1-204ENST00000503492 DEFB129Q9H1M3 183 aa24.87■■□□□ 1.57
PCDH1-204ENST00000503492 GUCA1BQ9UMX6 200 aa24.87■■□□□ 1.57
PCDH1-204ENST00000503492 PLAGL2Q9UPG8 496 aa24.87■■□□□ 1.57
PCDH1-204ENST00000503492 CHMP2AO43633 222 aa24.87■■□□□ 1.57
PCDH1-204ENST00000503492 SLITRK3O94933 977 aa24.87■■□□□ 1.57
PCDH1-204ENST00000503492 ICAM1P05362 532 aa24.87■■□□□ 1.57
PCDH1-204ENST00000503492 MARSP56192 900 aaKnown RBP24.87■■□□□ 1.57
PCDH1-204ENST00000503492 KRT83P78385 493 aa24.87■■□□□ 1.57
PCDH1-204ENST00000503492 EPM2AIP1Q7L775 607 aaPredicted RBP24.87■■□□□ 1.57
PCDH1-204ENST00000503492 DYDC2Q96IM9 177 aa24.87■■□□□ 1.57
PCDH1-204ENST00000503492 HAUS4Q9H6D7 363 aa24.87■■□□□ 1.57
PCDH1-204ENST00000503492 TUFT1Q9NNX1 390 aa24.87■■□□□ 1.57
PCDH1-204ENST00000503492 CCPG1Q9ULG6 757 aa24.87■■□□□ 1.57
PCDH1-204ENST00000503492 EIF3CLB5ME19 914 aaKnown RBP24.86■■□□□ 1.57
PCDH1-204ENST00000503492 GNA14O95837 355 aa24.86■■□□□ 1.57
PCDH1-204ENST00000503492 ARP10275 920 aa24.86■■□□□ 1.57
PCDH1-204ENST00000503492 PIGOQ8TEQ8 1089 aa24.86■■□□□ 1.57
PCDH1-204ENST00000503492 SMCR8Q8TEV9 937 aaPredicted RBP24.86■■□□□ 1.57
PCDH1-204ENST00000503492 EIF3CQ99613 913 aaKnown RBP24.86■■□□□ 1.57
PCDH1-204ENST00000503492 BCAS3Q9H6U6 928 aa24.86■■□□□ 1.57
PCDH1-204ENST00000503492 ASTN2O75129 1339 aaPredicted RBP24.86■■□□□ 1.57
PCDH1-204ENST00000503492 RBBP6Q7Z6E9 1792 aaKnown RBP24.86■■□□□ 1.57
PCDH1-204ENST00000503492 HOXD13P35453 343 aa24.86■■□□□ 1.57
PCDH1-204ENST00000503492 DGKZQ13574 1117 aa24.86■■□□□ 1.57
PCDH1-204ENST00000503492 EDRF1Q3B7T1 1238 aa24.86■■□□□ 1.57
PCDH1-204ENST00000503492 TRIM59Q8IWR1 403 aa24.86■■□□□ 1.57
PCDH1-204ENST00000503492 KCTD17Q8N5Z5 321 aa24.86■■□□□ 1.57
PCDH1-204ENST00000503492 POLD4Q9HCU8 107 aa24.86■■□□□ 1.57
PCDH1-204ENST00000503492 CDC23Q9UJX2 597 aa24.86■■□□□ 1.57
PCDH1-204ENST00000503492 GAS7O60861 476 aa24.85■■□□□ 1.57
PCDH1-204ENST00000503492 HSD17B4P51659 736 aa24.85■■□□□ 1.57
PCDH1-204ENST00000503492 ADAM9Q13443 819 aa24.85■■□□□ 1.57
PCDH1-204ENST00000503492 TNFAIP1Q13829 316 aa24.85■■□□□ 1.57
PCDH1-204ENST00000503492 PPP4R3CPQ6ZMV5 832 aa24.85■■□□□ 1.57
PCDH1-204ENST00000503492 RSRC2Q7L4I2 434 aaKnown RBP24.85■■□□□ 1.57
PCDH1-204ENST00000503492 TPH2Q8IWU9 490 aa24.85■■□□□ 1.57
PCDH1-204ENST00000503492 NAPGQ99747 312 aaPredicted RBP24.85■■□□□ 1.57
PCDH1-204ENST00000503492 WDR46O15213 610 aaKnown RBP24.85■■□□□ 1.57
PCDH1-204ENST00000503492 PLEKP08567 350 aaPredicted RBP24.85■■□□□ 1.57
PCDH1-204ENST00000503492 MYBP10242 640 aa24.85■■□□□ 1.57
PCDH1-204ENST00000503492 RPS12P25398 132 aaKnown RBP24.85■■□□□ 1.57
PCDH1-204ENST00000503492 PRELPP51888 382 aa24.85■■□□□ 1.57
PCDH1-204ENST00000503492 RINT1Q6NUQ1 792 aa24.85■■□□□ 1.57
PCDH1-204ENST00000503492 ZNF662Q6ZS27 426 aa24.85■■□□□ 1.57
PCDH1-204ENST00000503492 PRPF38AQ8NAV1 312 aaKnown RBP24.85■■□□□ 1.57
PCDH1-204ENST00000503492 BAP1Q92560 729 aa24.85■■□□□ 1.57
PCDH1-204ENST00000503492 PPP1R1BQ9UD71 204 aaPredicted RBP24.85■■□□□ 1.57
PCDH1-204ENST00000503492 POLD1P28340 1107 aa24.84■■□□□ 1.57
PCDH1-204ENST00000503492 SAMD7Q7Z3H4 446 aa24.84■■□□□ 1.57
PCDH1-204ENST00000503492 ZNF577Q9BSK1 485 aa24.84■■□□□ 1.57
PCDH1-204ENST00000503492 COL20A1Q9P218 1284 aa24.84■■□□□ 1.57
PCDH1-204ENST00000503492 ARHGAP20Q9P2F6 1191 aa24.84■■□□□ 1.57
PCDH1-204ENST00000503492 RCCD1A6NED2 376 aa24.83■■□□□ 1.57
PCDH1-204ENST00000503492 SPDYE4A6NLX3 237 aa24.83■■□□□ 1.57
PCDH1-204ENST00000503492 NFIBO00712 420 aa24.83■■□□□ 1.57
PCDH1-204ENST00000503492 KNOP1Q1ED39 458 aaKnown RBP24.83■■□□□ 1.57
PCDH1-204ENST00000503492 CCDC122Q5T0U0 273 aa24.83■■□□□ 1.57
PCDH1-204ENST00000503492 NEK11Q8NG66 645 aa24.83■■□□□ 1.57
PCDH1-204ENST00000503492 CLEC4DQ8WXI8 215 aa24.83■■□□□ 1.57
PCDH1-204ENST00000503492 LPAR1Q92633 364 aa24.83■■□□□ 1.57
PCDH1-204ENST00000503492 HOOK2Q96ED9 719 aa24.83■■□□□ 1.57
PCDH1-204ENST00000503492 KIAA1683Q9H0B3 1180 aa24.83■■□□□ 1.57
PCDH1-204ENST00000503492 UNC45AQ9H3U1 944 aa24.83■■□□□ 1.57
PCDH1-204ENST00000503492 TRAF3IP3Q9Y228 551 aa24.83■■□□□ 1.57
PCDH1-204ENST00000503492 LRRC53A6NM62 1247 aa24.83■■□□□ 1.57
PCDH1-204ENST00000503492 ZBTB39O15060 712 aa24.83■■□□□ 1.57
PCDH1-204ENST00000503492 PRPF6O94906 941 aaKnown RBP24.83■■□□□ 1.57
PCDH1-204ENST00000503492 RRAGAQ7L523 313 aa24.83■■□□□ 1.57
PCDH1-204ENST00000503492 KIAA1328Q86T90 577 aa24.83■■□□□ 1.57
PCDH1-204ENST00000503492 MICALL2Q8IY33 904 aa24.83■■□□□ 1.57
PCDH1-204ENST00000503492 ZNF263O14978 683 aa24.82■■□□□ 1.56
PCDH1-204ENST00000503492 NR2F2P24468 414 aa24.82■■□□□ 1.56
PCDH1-204ENST00000503492 GMPSP49915 693 aaPredicted RBP24.82■■□□□ 1.56
PCDH1-204ENST00000503492 SETQ01105 290 aaPredicted RBP24.82■■□□□ 1.56
PCDH1-204ENST00000503492 JAKMIP2Q96AA8 810 aa24.82■■□□□ 1.56
PCDH1-204ENST00000503492 MXRA8Q9BRK3 442 aa24.82■■□□□ 1.56
PCDH1-204ENST00000503492 LACRTQ9GZZ8 138 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms