RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 CCDC85BQ15834 202 aaPredicted RBP22.25■■□□□ 1.15
UBE2D3-215ENST00000503418 TMCO2Q7Z6W1 182 aaPredicted RBP22.25■■□□□ 1.15
UBE2D3-215ENST00000503418 ZNF713Q8N859 430 aaPredicted RBP22.25■■□□□ 1.15
UBE2D3-215ENST00000503418 ZBED2Q9BTP6 218 aa22.25■■□□□ 1.15
UBE2D3-215ENST00000503418 COL25A1Q9BXS0 654 aaPredicted RBP22.25■■□□□ 1.15
UBE2D3-215ENST00000503418 CERS4Q9HA82 394 aa22.25■■□□□ 1.15
UBE2D3-215ENST00000503418 BARHL2Q9NY43 387 aa22.25■■□□□ 1.15
UBE2D3-215ENST00000503418 EMSYQ7Z589 1322 aa22.25■■□□□ 1.15
UBE2D3-215ENST00000503418 ABHD14A-ACY1A0A1B0GW23 586 aa22.24■■□□□ 1.15
UBE2D3-215ENST00000503418 SMCO2A6NFE2 343 aa22.24■■□□□ 1.15
UBE2D3-215ENST00000503418 LGR5O75473 907 aa22.24■■□□□ 1.15
UBE2D3-215ENST00000503418 CTSHP09668 335 aa22.24■■□□□ 1.15
UBE2D3-215ENST00000503418 IKBKEQ14164 716 aa22.24■■□□□ 1.15
UBE2D3-215ENST00000503418 SEPT1Q8WYJ6 367 aa22.24■■□□□ 1.15
UBE2D3-215ENST00000503418 ANO3Q9BYT9 981 aa22.24■■□□□ 1.15
UBE2D3-215ENST00000503418 CCDC196A0A1B0GTZ2 297 aa22.23■■□□□ 1.15
UBE2D3-215ENST00000503418 FOSP01100 380 aaPredicted RBP22.23■■□□□ 1.15
UBE2D3-215ENST00000503418 MARK3P27448 753 aa22.23■■□□□ 1.15
UBE2D3-215ENST00000503418 LMBR1Q8WVP7 490 aa22.23■■□□□ 1.15
UBE2D3-215ENST00000503418 MXRA8Q9BRK3 442 aa22.23■■□□□ 1.15
UBE2D3-215ENST00000503418 TMEM260Q9NX78 707 aa22.23■■□□□ 1.15
UBE2D3-215ENST00000503418 MICAL3Q7RTP6 2002 aa22.23■■□□□ 1.15
UBE2D3-215ENST00000503418 GSTTP1A0A1W2PQM5 241 aa22.22■■□□□ 1.15
UBE2D3-215ENST00000503418 MAFGO15525 162 aa22.22■■□□□ 1.15
UBE2D3-215ENST00000503418 EFCAB14O75071 495 aa22.22■■□□□ 1.15
UBE2D3-215ENST00000503418 ARHGEF15O94989 841 aa22.22■■□□□ 1.15
UBE2D3-215ENST00000503418 RPS6KB1P23443 525 aa22.22■■□□□ 1.15
UBE2D3-215ENST00000503418 TAP1Q03518 808 aa22.22■■□□□ 1.15
UBE2D3-215ENST00000503418 MICALL1Q8N3F8 863 aa22.22■■□□□ 1.15
UBE2D3-215ENST00000503418 DBF4BQ8NFT6 615 aa22.22■■□□□ 1.15
UBE2D3-215ENST00000503418 CYP2W1Q8TAV3 490 aa22.22■■□□□ 1.15
UBE2D3-215ENST00000503418 GLG1Q92896 1179 aa22.22■■□□□ 1.15
UBE2D3-215ENST00000503418 GLT8D2Q9H1C3 349 aa22.22■■□□□ 1.15
UBE2D3-215ENST00000503418 PRDM6Q9NQX0 595 aa22.22■■□□□ 1.15
UBE2D3-215ENST00000503418 RFXAPO00287 272 aa22.21■■□□□ 1.15
UBE2D3-215ENST00000503418 PSMA5P28066 241 aa22.21■■□□□ 1.15
UBE2D3-215ENST00000503418 PFKFB3Q16875 520 aaPredicted RBP22.21■■□□□ 1.15
UBE2D3-215ENST00000503418 TEX2Q8IWB9 1127 aa22.21■■□□□ 1.15
UBE2D3-215ENST00000503418 ARNTL2Q8WYA1 636 aa22.21■■□□□ 1.15
UBE2D3-215ENST00000503418 JPH1Q9HDC5 661 aaPredicted RBP22.21■■□□□ 1.15
UBE2D3-215ENST00000503418 KCNH7Q9NS40 1196 aa22.21■■□□□ 1.15
UBE2D3-215ENST00000503418 ERAP1Q9NZ08 941 aa22.21■■□□□ 1.15
UBE2D3-215ENST00000503418 SLC9A2Q9UBY0 812 aa22.21■■□□□ 1.15
UBE2D3-215ENST00000503418 NRCAMQ92823 1304 aa22.21■■□□□ 1.15
UBE2D3-215ENST00000503418 LCHNA4D1U4 455 aa22.2■■□□□ 1.14
UBE2D3-215ENST00000503418 CAND2O75155 1236 aa22.2■■□□□ 1.14
UBE2D3-215ENST00000503418 SCG2P13521 617 aa22.2■■□□□ 1.14
UBE2D3-215ENST00000503418 ADAM17P78536 824 aa22.2■■□□□ 1.14
UBE2D3-215ENST00000503418 PPFIA1Q13136 1202 aa22.2■■□□□ 1.14
UBE2D3-215ENST00000503418 AP3B2Q13367 1082 aa22.2■■□□□ 1.14
UBE2D3-215ENST00000503418 FAM117BQ6P1L5 589 aa22.2■■□□□ 1.14
UBE2D3-215ENST00000503418 SDF4Q9BRK5 362 aa22.2■■□□□ 1.14
UBE2D3-215ENST00000503418 SMARCAD1Q9H4L7 1026 aa22.2■■□□□ 1.14
UBE2D3-215ENST00000503418 EPOPA6NHQ4 379 aa22.19■■□□□ 1.14
UBE2D3-215ENST00000503418 GJB5O95377 273 aa22.19■■□□□ 1.14
UBE2D3-215ENST00000503418 ARP10275 920 aa22.19■■□□□ 1.14
UBE2D3-215ENST00000503418 ZNF76P36508 570 aa22.19■■□□□ 1.14
UBE2D3-215ENST00000503418 SREBF1P36956 1147 aa22.19■■□□□ 1.14
UBE2D3-215ENST00000503418 CLK2P49760 499 aaKnown RBP22.19■■□□□ 1.14
UBE2D3-215ENST00000503418 CEP55Q53EZ4 464 aa22.19■■□□□ 1.14
UBE2D3-215ENST00000503418 JAKMIP3Q5VZ66 844 aa22.19■■□□□ 1.14
UBE2D3-215ENST00000503418 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.19■■□□□ 1.144e-6■■■□□ 19.2
UBE2D3-215ENST00000503418 NID2Q14112 1375 aa22.19■■□□□ 1.14
UBE2D3-215ENST00000503418 AKAP17AQ02040 695 aaKnown RBP22.18■■□□□ 1.14
UBE2D3-215ENST00000503418 GRIK4Q16099 956 aa22.18■■□□□ 1.14
UBE2D3-215ENST00000503418 PLEKHG4Q58EX7 1191 aa22.18■■□□□ 1.14
UBE2D3-215ENST00000503418 SPRED2Q7Z698 418 aa22.18■■□□□ 1.14
UBE2D3-215ENST00000503418 MYOCDQ8IZQ8 938 aa22.18■■□□□ 1.14
UBE2D3-215ENST00000503418 SEPT8Q92599 483 aa22.18■■□□□ 1.14
UBE2D3-215ENST00000503418 PHKBQ93100 1093 aa22.18■■□□□ 1.14
UBE2D3-215ENST00000503418 RAD9AQ99638 391 aa22.18■■□□□ 1.14
UBE2D3-215ENST00000503418 AZI2Q9H6S1 392 aa22.18■■□□□ 1.14
UBE2D3-215ENST00000503418 NFASCO94856 1347 aa22.17■■□□□ 1.14
UBE2D3-215ENST00000503418 GTPBP6O43824 516 aaPredicted RBP22.17■■□□□ 1.14
UBE2D3-215ENST00000503418 PPFIA3O75145 1194 aa22.17■■□□□ 1.14
UBE2D3-215ENST00000503418 AMHP03971 560 aa22.17■■□□□ 1.14
UBE2D3-215ENST00000503418 IGBP1P78318 339 aa22.17■■□□□ 1.14
UBE2D3-215ENST00000503418 RUFY4Q6ZNE9 571 aa22.17■■□□□ 1.14
UBE2D3-215ENST00000503418 FBXL16Q8N461 479 aa22.17■■□□□ 1.14
UBE2D3-215ENST00000503418 CCDC12Q8WUD4 166 aaPredicted RBP22.17■■□□□ 1.14
UBE2D3-215ENST00000503418 AGXT2Q9BYV1 514 aa22.17■■□□□ 1.14
UBE2D3-215ENST00000503418 OSBPL7Q9BZF2 842 aa22.17■■□□□ 1.14
UBE2D3-215ENST00000503418 AGO4Q9HCK5 861 aaKnown RBP22.17■■□□□ 1.14
UBE2D3-215ENST00000503418 THEGQ9P2T0 379 aa22.17■■□□□ 1.14
UBE2D3-215ENST00000503418 TUBE1Q9UJT0 475 aa22.17■■□□□ 1.14
UBE2D3-215ENST00000503418 CUL9Q8IWT3 2517 aa22.17■■□□□ 1.14
UBE2D3-215ENST00000503418 COL4A4P53420 1690 aaPredicted RBP22.17■■□□□ 1.14
UBE2D3-215ENST00000503418 PRPF3O43395 683 aaKnown RBP22.16■■□□□ 1.14
UBE2D3-215ENST00000503418 ACTR2P61160 394 aa22.16■■□□□ 1.14
UBE2D3-215ENST00000503418 CCT2P78371 535 aaKnown RBP22.16■■□□□ 1.14
UBE2D3-215ENST00000503418 ITGB3BPQ13352 177 aaPredicted RBP22.16■■□□□ 1.14
UBE2D3-215ENST00000503418 TAF2Q6P1X5 1199 aa22.16■■□□□ 1.14
UBE2D3-215ENST00000503418 PCYT2Q99447 389 aa22.16■■□□□ 1.14
UBE2D3-215ENST00000503418 C6orf50Q9HD87 102 aa22.16■■□□□ 1.14
UBE2D3-215ENST00000503418 SIP14410 1827 aa22.15■■□□□ 1.14
UBE2D3-215ENST00000503418 ESYT2A0FGR8 921 aa22.15■■□□□ 1.14
UBE2D3-215ENST00000503418 DDX39AO00148 427 aaKnown RBP22.15■■□□□ 1.14
UBE2D3-215ENST00000503418 MEIS1O00470 390 aa22.15■■□□□ 1.14
UBE2D3-215ENST00000503418 PKN1Q16512 942 aa22.15■■□□□ 1.14
UBE2D3-215ENST00000503418 RUFY3Q7L099 469 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms