RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 SPTLC3Q9NUV7 552 aa24.49■■□□□ 1.51
PTPN13-205ENST00000502971 RGL1Q9NZL6 768 aa24.49■■□□□ 1.51
PTPN13-205ENST00000502971 CHMP2AO43633 222 aa24.48■■□□□ 1.51
PTPN13-205ENST00000502971 KRT18P05783 430 aaKnown RBP24.48■■□□□ 1.51
PTPN13-205ENST00000502971 CCZ1BP86790 482 aa24.48■■□□□ 1.51
PTPN13-205ENST00000502971 CCZ1P86791 482 aaPredicted RBP24.48■■□□□ 1.51
PTPN13-205ENST00000502971 TBX2Q13207 712 aaPredicted RBP24.48■■□□□ 1.51
PTPN13-205ENST00000502971 PABPC4Q13310 644 aaKnown RBP eCLIP24.48■■□□□ 1.51
PTPN13-205ENST00000502971 MTMR1Q13613 665 aa24.48■■□□□ 1.51
PTPN13-205ENST00000502971 TTLL12Q14166 644 aaPredicted RBP24.48■■□□□ 1.51
PTPN13-205ENST00000502971 ARSHQ5FYA8 562 aa24.48■■□□□ 1.51
PTPN13-205ENST00000502971 TREML2Q5T2D2 321 aa24.48■■□□□ 1.51
PTPN13-205ENST00000502971 ANKRD40Q6AI12 368 aa24.48■■□□□ 1.51
PTPN13-205ENST00000502971 CHADLQ6NUI6 762 aa24.48■■□□□ 1.51
PTPN13-205ENST00000502971 CSGALNACT2Q8N6G5 542 aa24.48■■□□□ 1.51
PTPN13-205ENST00000502971 MB21D1Q8N884 522 aa24.48■■□□□ 1.51
PTPN13-205ENST00000502971 DYDC2Q96IM9 177 aa24.48■■□□□ 1.51
PTPN13-205ENST00000502971 SRRTQ9BXP5 876 aaKnown RBP24.48■■□□□ 1.51
PTPN13-205ENST00000502971 NRDCO43847 1150 aa24.47■■□□□ 1.51
PTPN13-205ENST00000502971 SKILP12757 684 aa24.47■■□□□ 1.51
PTPN13-205ENST00000502971 FAM26FQ5R3K3 315 aa24.47■■□□□ 1.51
PTPN13-205ENST00000502971 ARMC9Q7Z3E5 817 aa24.47■■□□□ 1.51
PTPN13-205ENST00000502971 IRF2BP1Q8IU81 584 aa24.47■■□□□ 1.51
PTPN13-205ENST00000502971 FAM114A1Q8IWE2 563 aa24.47■■□□□ 1.51
PTPN13-205ENST00000502971 TBC1D22BQ9NU19 505 aa24.47■■□□□ 1.51
PTPN13-205ENST00000502971 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.47■■□□□ 1.51
PTPN13-205ENST00000502971 MAGEC2Q9UBF1 373 aaPredicted RBP24.47■■□□□ 1.51
PTPN13-205ENST00000502971 LOC285556D6RIA3 1793 aa24.47■■□□□ 1.51
PTPN13-205ENST00000502971 IRF6O14896 467 aa24.47■■□□□ 1.51
PTPN13-205ENST00000502971 YY1P25490 414 aa24.47■■□□□ 1.51
PTPN13-205ENST00000502971 COPB1P53618 953 aaKnown RBP24.47■■□□□ 1.51
PTPN13-205ENST00000502971 FKBP1BP68106 108 aa24.47■■□□□ 1.51
PTPN13-205ENST00000502971 CTTNQ14247 550 aaKnown RBP24.47■■□□□ 1.51
PTPN13-205ENST00000502971 TPH2Q8IWU9 490 aa24.47■■□□□ 1.51
PTPN13-205ENST00000502971 CHST13Q8NET6 341 aa24.47■■□□□ 1.51
PTPN13-205ENST00000502971 OTUD5Q96G74 571 aa24.47■■□□□ 1.51
PTPN13-205ENST00000502971 SEMA6BQ9H3T3 888 aa24.47■■□□□ 1.51
PTPN13-205ENST00000502971 DHX15O43143 795 aaKnown RBP24.46■■□□□ 1.51
PTPN13-205ENST00000502971 MYCLP12524 364 aaPredicted RBP24.46■■□□□ 1.51
PTPN13-205ENST00000502971 CCND2P30279 289 aa24.46■■□□□ 1.51
PTPN13-205ENST00000502971 PBX1P40424 430 aa24.46■■□□□ 1.51
PTPN13-205ENST00000502971 LRRC63Q05C16 580 aa24.46■■□□□ 1.51
PTPN13-205ENST00000502971 PPIL2Q13356 520 aa24.46■■□□□ 1.51
PTPN13-205ENST00000502971 GIT2Q14161 759 aa24.46■■□□□ 1.51
PTPN13-205ENST00000502971 PLS1Q14651 629 aa24.46■■□□□ 1.51
PTPN13-205ENST00000502971 LBX2Q6XYB7 198 aa24.46■■□□□ 1.51
PTPN13-205ENST00000502971 GADL1Q6ZQY3 521 aa24.46■■□□□ 1.51
PTPN13-205ENST00000502971 MYOCDQ8IZQ8 938 aa24.46■■□□□ 1.51
PTPN13-205ENST00000502971 NSUN6Q8TEA1 469 aaKnown RBP24.46■■□□□ 1.51
PTPN13-205ENST00000502971 KCNH4Q9UQ05 1017 aa24.46■■□□□ 1.51
PTPN13-205ENST00000502971 TEX33O43247 280 aa24.45■■□□□ 1.5
PTPN13-205ENST00000502971 KIF20AO95235 890 aa24.45■■□□□ 1.5
PTPN13-205ENST00000502971 VSIG10LQ86VR7 867 aa24.45■■□□□ 1.5
PTPN13-205ENST00000502971 CLMNQ96JQ2 1002 aa24.45■■□□□ 1.5
PTPN13-205ENST00000502971 NACC1Q96RE7 527 aa24.45■■□□□ 1.5
PTPN13-205ENST00000502971 BHMT2Q9H2M3 363 aa24.45■■□□□ 1.5
PTPN13-205ENST00000502971 CYP39A1Q9NYL5 469 aa24.45■■□□□ 1.5
PTPN13-205ENST00000502971 PCDHA2Q9Y5H9 948 aa24.45■■□□□ 1.5
PTPN13-205ENST00000502971 NPHP3-ACAD11A0A0J9YXS1 232 aa24.44■■□□□ 1.5
PTPN13-205ENST00000502971 N4BP3O15049 544 aa24.44■■□□□ 1.5
PTPN13-205ENST00000502971 FGFR1OPO95684 399 aaKnown RBP24.44■■□□□ 1.5
PTPN13-205ENST00000502971 HERC4Q5GLZ8 1057 aaPredicted RBP24.44■■□□□ 1.5
PTPN13-205ENST00000502971 MIER3Q7Z3K6 550 aa24.44■■□□□ 1.5
PTPN13-205ENST00000502971 CCDC112Q8NEF3 446 aa24.44■■□□□ 1.5
PTPN13-205ENST00000502971 A1CFQ9NQ94 594 aaKnown RBP24.44■■□□□ 1.5
PTPN13-205ENST00000502971 MAFGO15525 162 aa24.44■■□□□ 1.5
PTPN13-205ENST00000502971 OFD1O75665 1012 aa24.44■■□□□ 1.5
PTPN13-205ENST00000502971 NR3C2P08235 984 aa24.44■■□□□ 1.5
PTPN13-205ENST00000502971 ITGB3BPQ13352 177 aaPredicted RBP24.44■■□□□ 1.5
PTPN13-205ENST00000502971 MOB2Q70IA6 237 aa24.44■■□□□ 1.5
PTPN13-205ENST00000502971 C17orf53Q8N3J3 647 aaPredicted RBP24.44■■□□□ 1.5
PTPN13-205ENST00000502971 TSG101Q99816 390 aa24.44■■□□□ 1.5
PTPN13-205ENST00000502971 TAB2Q9NYJ8 693 aa24.44■■□□□ 1.5
PTPN13-205ENST00000502971 A0A0G2JMZ2 1700 aa24.43■■□□□ 1.5
PTPN13-205ENST00000502971 ITIH6Q6UXX5 1313 aa24.43■■□□□ 1.5
PTPN13-205ENST00000502971 TRAF5O00463 557 aa24.43■■□□□ 1.5
PTPN13-205ENST00000502971 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.43■■□□□ 1.5
PTPN13-205ENST00000502971 NLRX1Q86UT6 975 aa24.43■■□□□ 1.5
PTPN13-205ENST00000502971 GPRASP2Q96D09 838 aa24.43■■□□□ 1.5
PTPN13-205ENST00000502971 PURBQ96QR8 312 aaKnown RBP24.43■■□□□ 1.5
PTPN13-205ENST00000502971 VPS16Q9H269 839 aa24.43■■□□□ 1.5
PTPN13-205ENST00000502971 FBXO40Q9UH90 709 aa24.43■■□□□ 1.5
PTPN13-205ENST00000502971 STAM2O75886 525 aa24.42■■□□□ 1.5
PTPN13-205ENST00000502971 ITGBL1O95965 494 aaPredicted RBP24.42■■□□□ 1.5
PTPN13-205ENST00000502971 IRX3P78415 501 aaPredicted RBP24.42■■□□□ 1.5
PTPN13-205ENST00000502971 RIOX2Q8IUF8 465 aa24.42■■□□□ 1.5
PTPN13-205ENST00000502971 CREBRFQ8IUR6 639 aa24.42■■□□□ 1.5
PTPN13-205ENST00000502971 REEP2Q9BRK0 252 aa24.42■■□□□ 1.5
PTPN13-205ENST00000502971 KCND2Q9NZV8 630 aa24.42■■□□□ 1.5
PTPN13-205ENST00000502971 DDX39AO00148 427 aaKnown RBP24.41■■□□□ 1.5
PTPN13-205ENST00000502971 P4HBP07237 508 aaKnown RBP24.41■■□□□ 1.5
PTPN13-205ENST00000502971 TPM2P07951 284 aa24.41■■□□□ 1.5
PTPN13-205ENST00000502971 CACNB1Q02641 598 aaPredicted RBP24.41■■□□□ 1.5
PTPN13-205ENST00000502971 PTPN21Q16825 1174 aa24.41■■□□□ 1.5
PTPN13-205ENST00000502971 LDLRAD1Q5T700 205 aa24.41■■□□□ 1.5
PTPN13-205ENST00000502971 RINT1Q6NUQ1 792 aa24.41■■□□□ 1.5
PTPN13-205ENST00000502971 PIGOQ8TEQ8 1089 aa24.41■■□□□ 1.5
PTPN13-205ENST00000502971 LXNQ9BS40 222 aa24.41■■□□□ 1.5
PTPN13-205ENST00000502971 PKD2L1Q9P0L9 805 aa24.41■■□□□ 1.5
PTPN13-205ENST00000502971 AGTPBP1Q9UPW5 1226 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms