RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 SATB1Q01826 763 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 TCP10Q12799 353 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 COASYQ13057 564 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 GRB10Q13322 594 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 EPHA7Q15375 998 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 MEA1Q16626 185 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 DYMQ7RTS9 669 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 GPR101Q96P66 508 aaPredicted RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 TYW1Q9NV66 732 aaKnown RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 GEMIN8Q9NWZ8 242 aaKnown RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 DDX41Q9UJV9 622 aaKnown RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 GUCA1BQ9UMX6 200 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 ATF5Q9Y2D1 282 aaPredicted RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 TARSL2A2RTX5 802 aaKnown RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 KLRC4O43908 158 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 GYPCP04921 128 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 POTEJP0CG39 1038 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 FERP16591 822 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 ELF2Q15723 593 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 TKFCQ3LXA3 575 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 OTUD6AQ7L8S5 288 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 SYT2Q8N9I0 419 aaPredicted RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 PLIN2Q99541 437 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 PLVAPQ9BX97 442 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 DIS3Q9Y2L1 958 aaKnown RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 ATP8B3O60423 1300 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 WDR46O15213 610 aaKnown RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 AFPP02771 609 aaKnown RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 SFNP31947 248 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 MARSP56192 900 aaKnown RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 ITIH3Q06033 890 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 RASA3Q14644 834 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 AP1ARQ63HQ0 302 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 ANKRD40Q6AI12 368 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 CCDC125Q86Z20 511 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 EXOC8Q8IYI6 725 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 SMYD4Q8IYR2 804 aaPredicted RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 SYCP3Q8IZU3 236 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 CCDC97Q96F63 343 aaPredicted RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 SLF1Q9BQI6 1058 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 VCPKMTQ9H867 229 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 NHEJ1Q9H9Q4 299 aaPredicted RBP8.14□□□□□ -1.11
PDGFC-203ENST00000502773 PLAGL2Q9UPG8 496 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 MAPK8IP1Q9UQF2 711 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 HYOU1Q9Y4L1 999 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 TAF1LQ8IZX4 1826 aa8.14□□□□□ -1.11
PDGFC-203ENST00000502773 BAZ2AQ9UIF9 1905 aaKnown RBP8.13□□□□□ -1.11
PDGFC-203ENST00000502773 TADA3O75528 432 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 NDUFB10O96000 172 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 PSMC2P35998 433 aaKnown RBP8.13□□□□□ -1.11
PDGFC-203ENST00000502773 PRELPP51888 382 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 MAP2K1Q02750 393 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-203ENST00000502773 KNOP1Q1ED39 458 aaKnown RBP8.13□□□□□ -1.11
PDGFC-203ENST00000502773 CIAPIN1Q6FI81 312 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 PRPF38AQ8NAV1 312 aaKnown RBP8.13□□□□□ -1.11
PDGFC-203ENST00000502773 CRACR2AQ9BSW2 395 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 SUDS3Q9H7L9 328 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-203ENST00000502773 MRPL44Q9H9J2 332 aaKnown RBP8.13□□□□□ -1.11
PDGFC-203ENST00000502773 KCNMB3Q9NPA1 279 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 JADE2Q9NQC1 790 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 TBC1D7Q9P0N9 293 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 TTC26A0AVF1 554 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 GTPBP10A4D1E9 387 aaKnown RBP8.13□□□□□ -1.11
PDGFC-203ENST00000502773 GH2P01242 217 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 BCRP11274 1271 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 JAK3P52333 1124 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 APBA1Q02410 837 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 NFIL3Q16649 462 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 ARMCX6Q7L4S7 300 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 ZNF507Q8TCN5 953 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 IRAK4Q9NWZ3 460 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 PIM2Q9P1W9 311 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 MYMKA6NI61 221 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 SOWAHDA6NJG2 315 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 USP27XA6NNY8 438 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 STAM2O75886 525 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 IL17AQ16552 155 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 CFAP221Q4G0U5 840 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 TRIM65Q6PJ69 517 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 PTF1AQ7RTS3 328 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 HVCN1Q96D96 273 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 PARVGQ9HBI0 331 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 MED4Q9NPJ6 270 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 INTUQ9ULD6 942 aa8.13□□□□□ -1.11
PDGFC-203ENST00000502773 MYO5AQ9Y4I1 1855 aaKnown RBP8.12□□□□□ -1.11
PDGFC-203ENST00000502773 P4HA2O15460 535 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 OPA1O60313 960 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 TDP2O95551 362 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 VIL1P09327 827 aaKnown RBP8.12□□□□□ -1.11
PDGFC-203ENST00000502773 TNNC1P63316 161 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 TYW1BQ6NUM6 668 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 TOGARAM2Q6ZUX3 1019 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 VEZTQ9HBM0 779 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 PLCB1Q9NQ66 1216 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 ZNF70Q9UC06 446 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-203ENST00000502773 SPDYE2BA6NHP3 402 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 KIAA0391O15091 583 aaKnown RBP8.12□□□□□ -1.11
PDGFC-203ENST00000502773 SPDYE6P0CI01 402 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 KLHL30Q0D2K2 578 aa8.12□□□□□ -1.11
PDGFC-203ENST00000502773 ERCC6LQ2NKX8 1250 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms