RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 EPHA5P54756 1037 aa8.64□□□□□ -1.03
NEDD4-203ENST00000502612 CYP4F22Q6NT55 531 aa8.64□□□□□ -1.03
NEDD4-203ENST00000502612 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.64□□□□□ -1.03
NEDD4-203ENST00000502612 ZSWIM9Q86XI8 627 aa8.64□□□□□ -1.03
NEDD4-203ENST00000502612 SPATS2Q86XZ4 545 aaKnown RBP8.64□□□□□ -1.03
NEDD4-203ENST00000502612 ELF4Q99607 663 aaPredicted RBP8.64□□□□□ -1.03
NEDD4-203ENST00000502612 SLC6A17Q9H1V8 727 aa8.64□□□□□ -1.03
NEDD4-203ENST00000502612 VTA1Q9NP79 307 aa8.64□□□□□ -1.03
NEDD4-203ENST00000502612 SLC5A4Q9NY91 659 aa8.64□□□□□ -1.03
NEDD4-203ENST00000502612 B3GALT1Q9Y5Z6 326 aa8.64□□□□□ -1.03
NEDD4-203ENST00000502612 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.63□□□□□ -1.03
NEDD4-203ENST00000502612 ACOT7O00154 380 aa8.63□□□□□ -1.03
NEDD4-203ENST00000502612 CLASP2O75122 1294 aaKnown RBP8.63□□□□□ -1.03
NEDD4-203ENST00000502612 GLI1P08151 1106 aa8.63□□□□□ -1.03
NEDD4-203ENST00000502612 HMGB1P09429 215 aaKnown RBP8.63□□□□□ -1.03
NEDD4-203ENST00000502612 PTPN1P18031 435 aaKnown RBP8.63□□□□□ -1.03
NEDD4-203ENST00000502612 RBM10P98175 930 aaKnown RBP8.63□□□□□ -1.03
NEDD4-203ENST00000502612 MTMR1Q13613 665 aa8.63□□□□□ -1.03
NEDD4-203ENST00000502612 KCNMB1Q16558 191 aa8.63□□□□□ -1.03
NEDD4-203ENST00000502612 RNF219Q5W0B1 726 aaPredicted RBP8.63□□□□□ -1.03
NEDD4-203ENST00000502612 BTBD8Q5XKL5 378 aa8.63□□□□□ -1.03
NEDD4-203ENST00000502612 EP400NLQ6ZTU2 488 aa8.63□□□□□ -1.03
NEDD4-203ENST00000502612 NLGN4XQ8N0W4 816 aa8.63□□□□□ -1.03
NEDD4-203ENST00000502612 PHOSPHO1Q8TCT1 267 aa8.63□□□□□ -1.03
NEDD4-203ENST00000502612 DLG3Q92796 817 aa8.63□□□□□ -1.03
NEDD4-203ENST00000502612 CCDC8Q9H0W5 538 aaPredicted RBP8.63□□□□□ -1.03
NEDD4-203ENST00000502612 RIC8BQ9NVN3 520 aa8.63□□□□□ -1.03
NEDD4-203ENST00000502612 KLHL42Q9P2K6 505 aa8.63□□□□□ -1.03
NEDD4-203ENST00000502612 LCHNA4D1U4 455 aa8.62□□□□□ -1.03
NEDD4-203ENST00000502612 OR14I1A6ND48 311 aa8.62□□□□□ -1.03
NEDD4-203ENST00000502612 BUB1BO60566 1050 aaPredicted RBP8.62□□□□□ -1.03
NEDD4-203ENST00000502612 MAFKO60675 156 aa8.62□□□□□ -1.03
NEDD4-203ENST00000502612 PRKD3O94806 890 aa8.62□□□□□ -1.03
NEDD4-203ENST00000502612 C4BPAP04003 597 aaKnown RBP8.62□□□□□ -1.03
NEDD4-203ENST00000502612 PTX3P26022 381 aaPredicted RBP8.62□□□□□ -1.03
NEDD4-203ENST00000502612 MAPKAPK2P49137 400 aa8.62□□□□□ -1.03
NEDD4-203ENST00000502612 NR1I3Q14994 352 aa8.62□□□□□ -1.03
NEDD4-203ENST00000502612 TMEM132BQ14DG7 1078 aa8.62□□□□□ -1.03
NEDD4-203ENST00000502612 HDGFL2Q7Z4V5 671 aaPredicted RBP8.62□□□□□ -1.03
NEDD4-203ENST00000502612 EFHBQ8N7U6 833 aa8.62□□□□□ -1.03
NEDD4-203ENST00000502612 LIN37Q96GY3 246 aaPredicted RBP8.62□□□□□ -1.03
NEDD4-203ENST00000502612 KCNK12Q9HB15 430 aa8.62□□□□□ -1.03
NEDD4-203ENST00000502612 ZNF503-AS2A6NEH8 195 aa8.61□□□□□ -1.03
NEDD4-203ENST00000502612 RASSF10A6NK89 507 aa8.61□□□□□ -1.03
NEDD4-203ENST00000502612 ALG1L2C9J202 215 aa8.61□□□□□ -1.03
NEDD4-203ENST00000502612 HIP1RO75146 1068 aa8.61□□□□□ -1.03
NEDD4-203ENST00000502612 PMLP29590 882 aa8.61□□□□□ -1.03
NEDD4-203ENST00000502612 ESRP1Q6NXG1 681 aaKnown RBP8.61□□□□□ -1.03
NEDD4-203ENST00000502612 TMC6Q7Z403 805 aa8.61□□□□□ -1.03
NEDD4-203ENST00000502612 NECAB2Q7Z6G3 386 aa8.61□□□□□ -1.03
NEDD4-203ENST00000502612 CLRN3Q8NCR9 226 aa8.61□□□□□ -1.03
NEDD4-203ENST00000502612 TSPAN17Q96FV3 270 aa8.61□□□□□ -1.03
NEDD4-203ENST00000502612 IRF2BPLQ9H1B7 796 aa8.61□□□□□ -1.03
NEDD4-203ENST00000502612 PCIF1Q9H4Z3 704 aa8.61□□□□□ -1.03
NEDD4-203ENST00000502612 TOMM22Q9NS69 142 aa8.61□□□□□ -1.03
NEDD4-203ENST00000502612 TYW1Q9NV66 732 aaKnown RBP8.61□□□□□ -1.03
NEDD4-203ENST00000502612 SPO11Q9Y5K1 396 aa8.61□□□□□ -1.03
NEDD4-203ENST00000502612 PRAMEF25A6NGN4 478 aa8.6□□□□□ -1.03
NEDD4-203ENST00000502612 ITGB5P18084 799 aa8.6□□□□□ -1.03
NEDD4-203ENST00000502612 STAT5AP42229 794 aa8.6□□□□□ -1.03
NEDD4-203ENST00000502612 YBX1P67809 324 aaKnown RBP8.6□□□□□ -1.03
NEDD4-203ENST00000502612 ZNF200P98182 395 aaPredicted RBP8.6□□□□□ -1.03
NEDD4-203ENST00000502612 ZNF174Q15697 407 aa8.6□□□□□ -1.03
NEDD4-203ENST00000502612 CATSPEREQ5SY80 951 aa8.6□□□□□ -1.03
NEDD4-203ENST00000502612 ZC3H14Q6PJT7 736 aaKnown RBP8.6□□□□□ -1.03
NEDD4-203ENST00000502612 ZNF605Q86T29 641 aa8.6□□□□□ -1.03
NEDD4-203ENST00000502612 C11orf74Q86VG3 221 aa8.6□□□□□ -1.03
NEDD4-203ENST00000502612 CNTD1Q8N815 330 aa8.6□□□□□ -1.03
NEDD4-203ENST00000502612 FAM168AQ92567 244 aa8.6□□□□□ -1.03
NEDD4-203ENST00000502612 SLC5A5Q92911 643 aa8.6□□□□□ -1.03
NEDD4-203ENST00000502612 MTMR8Q96EF0 704 aa8.6□□□□□ -1.03
NEDD4-203ENST00000502612 SMAD5Q99717 465 aaKnown RBP8.6□□□□□ -1.03
NEDD4-203ENST00000502612 ASPSCR1Q9BZE9 553 aa8.6□□□□□ -1.03
NEDD4-203ENST00000502612 KCNH7Q9NS40 1196 aa8.6□□□□□ -1.03
NEDD4-203ENST00000502612 RBPJLQ9UBG7 517 aa8.6□□□□□ -1.03
NEDD4-203ENST00000502612 CARMIL2Q6F5E8 1435 aa8.6□□□□□ -1.03
NEDD4-203ENST00000502612 CCDC180Q9P1Z9 1646 aa8.59□□□□□ -1.03
NEDD4-203ENST00000502612 VIPR1P32241 457 aa8.59□□□□□ -1.03
NEDD4-203ENST00000502612 THBS2P35442 1172 aa8.59□□□□□ -1.03
NEDD4-203ENST00000502612 OCRLQ01968 901 aa8.59□□□□□ -1.03
NEDD4-203ENST00000502612 ITKQ08881 620 aa8.59□□□□□ -1.03
NEDD4-203ENST00000502612 DDB1Q16531 1140 aa8.59□□□□□ -1.03
NEDD4-203ENST00000502612 BROXQ5VW32 411 aa8.59□□□□□ -1.03
NEDD4-203ENST00000502612 IQSEC1Q6DN90 963 aa8.59□□□□□ -1.03
NEDD4-203ENST00000502612 IRF2BP1Q8IU81 584 aa8.59□□□□□ -1.03
NEDD4-203ENST00000502612 Q8N3U1 123 aa8.59□□□□□ -1.03
NEDD4-203ENST00000502612 ALG3Q92685 438 aa8.59□□□□□ -1.03
NEDD4-203ENST00000502612 ZMAT4Q9H898 229 aa8.59□□□□□ -1.03
NEDD4-203ENST00000502612 ZBTB7AO95365 584 aa8.58□□□□□ -1.04
NEDD4-203ENST00000502612 MMEP08473 750 aa8.58□□□□□ -1.04
NEDD4-203ENST00000502612 TMEM253P0C7T8 217 aa8.58□□□□□ -1.04
NEDD4-203ENST00000502612 SMAD3P84022 425 aaKnown RBP8.58□□□□□ -1.04
NEDD4-203ENST00000502612 EXOSC10Q01780 885 aaKnown RBP8.58□□□□□ -1.04
NEDD4-203ENST00000502612 SMAD2Q15796 467 aaKnown RBP8.58□□□□□ -1.04
NEDD4-203ENST00000502612 PAN2Q504Q3 1202 aaKnown RBP8.58□□□□□ -1.04
NEDD4-203ENST00000502612 CC2D1AQ6P1N0 951 aaPredicted RBP8.58□□□□□ -1.04
NEDD4-203ENST00000502612 NBPF11Q86T75 865 aa8.58□□□□□ -1.04
NEDD4-203ENST00000502612 TRIM48Q8IWZ4 208 aa8.58□□□□□ -1.04
NEDD4-203ENST00000502612 RAVER1Q8IY67 606 aaKnown RBP8.58□□□□□ -1.04
NEDD4-203ENST00000502612 FAM26EQ8N5C1 309 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms